RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 CHMP24386 653 aa12.6□□□□□ -0.39
RNF40-212ENST00000602784 GCKP35557 465 aa12.6□□□□□ -0.39
RNF40-212ENST00000602784 GZMMP51124 257 aa12.6□□□□□ -0.39
RNF40-212ENST00000602784 P2RX1P51575 399 aa12.6□□□□□ -0.39
RNF40-212ENST00000602784 KCNJ10P78508 379 aa12.6□□□□□ -0.39
RNF40-212ENST00000602784 HSF1Q00613 529 aa12.6□□□□□ -0.39
RNF40-212ENST00000602784 ZNF117Q03924 483 aa12.6□□□□□ -0.39
RNF40-212ENST00000602784 SKP2Q13309 424 aa12.6□□□□□ -0.39
RNF40-212ENST00000602784 SELPLGQ14242 412 aa12.6□□□□□ -0.39
RNF40-212ENST00000602784 KRT72Q14CN4 511 aa12.6□□□□□ -0.39
RNF40-212ENST00000602784 CYP51A1Q16850 503 aa12.6□□□□□ -0.39
RNF40-212ENST00000602784 EIPR1Q53HC9 387 aa12.6□□□□□ -0.39
RNF40-212ENST00000602784 RABL3Q5HYI8 236 aa12.6□□□□□ -0.39
RNF40-212ENST00000602784 PTOV1Q86YD1 416 aa12.6□□□□□ -0.39
RNF40-212ENST00000602784 SLC30A8Q8IWU4 369 aa12.6□□□□□ -0.39
RNF40-212ENST00000602784 ZNF614Q8N883 585 aa12.6□□□□□ -0.39
RNF40-212ENST00000602784 OR14L1PQ8NHC6 308 aa12.6□□□□□ -0.39
RNF40-212ENST00000602784 BCAS4Q8TDM0 211 aa12.6□□□□□ -0.39
RNF40-212ENST00000602784 SARAFQ96BY9 339 aa12.6□□□□□ -0.39
RNF40-212ENST00000602784 ARSGQ96EG1 525 aa12.6□□□□□ -0.39
RNF40-212ENST00000602784 ECSITQ9BQ95 431 aa12.6□□□□□ -0.39
RNF40-212ENST00000602784 TRIM8Q9BZR9 551 aa12.6□□□□□ -0.39
RNF40-212ENST00000602784 SLC6A15Q9H2J7 730 aa12.6□□□□□ -0.39
RNF40-212ENST00000602784 DKKL1Q9UK85 242 aa12.6□□□□□ -0.39
RNF40-212ENST00000602784 CARD8Q9Y2G2 431 aa12.6□□□□□ -0.39
RNF40-212ENST00000602784 IFT52Q9Y366 437 aa12.6□□□□□ -0.39
RNF40-212ENST00000602784 L3MBTL1Q9Y468 752 aa12.6□□□□□ -0.39
RNF40-212ENST00000602784 GCN1Q92616 2671 aaKnown RBP12.6□□□□□ -0.39
RNF40-212ENST00000602784 ABOP16442 354 aa12.59□□□□□ -0.39
RNF40-212ENST00000602784 IL7RP16871 459 aa12.59□□□□□ -0.39
RNF40-212ENST00000602784 PGM1P36871 562 aa12.59□□□□□ -0.39
RNF40-212ENST00000602784 UQCRFS1P47985 274 aa12.59□□□□□ -0.39
RNF40-212ENST00000602784 MNAT1P51948 309 aa12.59□□□□□ -0.39
RNF40-212ENST00000602784 CASP6P55212 293 aa12.59□□□□□ -0.39
RNF40-212ENST00000602784 GFRA1P56159 465 aa12.59□□□□□ -0.39
RNF40-212ENST00000602784 ART3Q13508 389 aa12.59□□□□□ -0.39
RNF40-212ENST00000602784 SCARB2Q14108 478 aa12.59□□□□□ -0.39
RNF40-212ENST00000602784 LARS2Q15031 903 aaKnown RBP12.59□□□□□ -0.39
RNF40-212ENST00000602784 TMEM44Q2T9K0 475 aa12.59□□□□□ -0.39
RNF40-212ENST00000602784 EIF2S3LQ2VIR3 472 aaKnown RBP12.59□□□□□ -0.39
RNF40-212ENST00000602784 WIPI1Q5MNZ9 446 aaPredicted RBP12.59□□□□□ -0.39
RNF40-212ENST00000602784 VASNQ6EMK4 673 aa12.59□□□□□ -0.39
RNF40-212ENST00000602784 C8orf82Q6P1X6 216 aaPredicted RBP12.59□□□□□ -0.39
RNF40-212ENST00000602784 AAGABQ6PD74 315 aa12.59□□□□□ -0.39
RNF40-212ENST00000602784 CBLN3Q6UW01 205 aa12.59□□□□□ -0.39
RNF40-212ENST00000602784 YRDCQ86U90 279 aaKnown RBP12.59□□□□□ -0.39
RNF40-212ENST00000602784 IFNEQ86WN2 208 aa12.59□□□□□ -0.39
RNF40-212ENST00000602784 CALHM3Q86XJ0 350 aa12.59□□□□□ -0.39
RNF40-212ENST00000602784 KRT73Q86Y46 540 aa12.59□□□□□ -0.39
RNF40-212ENST00000602784 FITM2Q8N6M3 262 aa12.59□□□□□ -0.39
RNF40-212ENST00000602784 HIPK4Q8NE63 616 aa12.59□□□□□ -0.39
RNF40-212ENST00000602784 OR52P1PQ8NH57 321 aa12.59□□□□□ -0.39
RNF40-212ENST00000602784 OR5W2Q8NH69 310 aa12.59□□□□□ -0.39
RNF40-212ENST00000602784 OR10A6Q8NH74 314 aa12.59□□□□□ -0.39
RNF40-212ENST00000602784 NFKBIDQ8NI38 313 aa12.59□□□□□ -0.39
RNF40-212ENST00000602784 FAM57AQ8TBR7 257 aa12.59□□□□□ -0.39
RNF40-212ENST00000602784 GPR119Q8TDV5 335 aa12.59□□□□□ -0.39
RNF40-212ENST00000602784 WDR60Q8WVS4 1066 aa12.59□□□□□ -0.39
RNF40-212ENST00000602784 ZBTB8AQ96BR9 441 aa12.59□□□□□ -0.39
RNF40-212ENST00000602784 SH3YL1Q96HL8 342 aaPredicted RBP12.59□□□□□ -0.39
RNF40-212ENST00000602784 SPATA5L1Q9BVQ7 753 aa12.59□□□□□ -0.39
RNF40-212ENST00000602784 QRSL1Q9H0R6 528 aaKnown RBP12.59□□□□□ -0.39
RNF40-212ENST00000602784 ARMC7Q9H6L4 198 aa12.59□□□□□ -0.39
RNF40-212ENST00000602784 EXO5Q9H790 373 aa12.59□□□□□ -0.39
RNF40-212ENST00000602784 CACYBPQ9HB71 228 aaKnown RBP12.59□□□□□ -0.39
RNF40-212ENST00000602784 EXOSC3Q9NQT5 275 aaKnown RBP12.59□□□□□ -0.39
RNF40-212ENST00000602784 SPRR3Q9UBC9 169 aa12.59□□□□□ -0.39
RNF40-212ENST00000602784 TAGLN3Q9UI15 199 aa12.59□□□□□ -0.39
RNF40-212ENST00000602784 OSGIN2Q9Y236 505 aa12.59□□□□□ -0.39
RNF40-212ENST00000602784 A0A1B0GUH1 482 aa12.58□□□□□ -0.4
RNF40-212ENST00000602784 CDHR4A6H8M9 788 aa12.58□□□□□ -0.4
RNF40-212ENST00000602784 FAM47E-STBD1D6RA91 191 aa12.58□□□□□ -0.4
RNF40-212ENST00000602784 PRRG2O14669 202 aa12.58□□□□□ -0.4
RNF40-212ENST00000602784 OIP5O43482 229 aa12.58□□□□□ -0.4
RNF40-212ENST00000602784 HOXD4P09016 255 aaPredicted RBP12.58□□□□□ -0.4
RNF40-212ENST00000602784 ZNF17P17021 662 aa12.58□□□□□ -0.4
RNF40-212ENST00000602784 HK1P19367 917 aa12.58□□□□□ -0.4
RNF40-212ENST00000602784 PCGF2P35227 344 aa12.58□□□□□ -0.4
RNF40-212ENST00000602784 EIF1P41567 113 aaKnown RBP12.58□□□□□ -0.4
RNF40-212ENST00000602784 CA7P43166 264 aa12.58□□□□□ -0.4
RNF40-212ENST00000602784 NUDT2P50583 147 aa12.58□□□□□ -0.4
RNF40-212ENST00000602784 ZNF41P51814 821 aaPredicted RBP12.58□□□□□ -0.4
RNF40-212ENST00000602784 PCBP3P57721 371 aaKnown RBP12.58□□□□□ -0.4
RNF40-212ENST00000602784 B3GALT5-AS1P59052 145 aa12.58□□□□□ -0.4
RNF40-212ENST00000602784 CRYZQ08257 329 aaKnown RBP12.58□□□□□ -0.4
RNF40-212ENST00000602784 BCL2A1Q16548 175 aa12.58□□□□□ -0.4
RNF40-212ENST00000602784 LIN52Q52LA3 116 aa12.58□□□□□ -0.4
RNF40-212ENST00000602784 RPS26P11Q5JNZ5 115 aaPredicted RBP12.58□□□□□ -0.4
RNF40-212ENST00000602784 RNF220Q5VTB9 566 aa12.58□□□□□ -0.4
RNF40-212ENST00000602784 ERICH5Q6P6B1 374 aa12.58□□□□□ -0.4
RNF40-212ENST00000602784 ARSKQ6UWY0 536 aa12.58□□□□□ -0.4
RNF40-212ENST00000602784 DOLPP1Q86YN1 238 aa12.58□□□□□ -0.4
RNF40-212ENST00000602784 GRAMD2AQ8IUY3 354 aa12.58□□□□□ -0.4
RNF40-212ENST00000602784 ZZZ3Q8IYH5 903 aa12.58□□□□□ -0.4
RNF40-212ENST00000602784 ZNF440Q8IYI8 595 aa12.58□□□□□ -0.4
RNF40-212ENST00000602784 GTPBP8Q8N3Z3 284 aaPredicted RBP12.58□□□□□ -0.4
RNF40-212ENST00000602784 PRR7Q8TB68 274 aa12.58□□□□□ -0.4
RNF40-212ENST00000602784 ABTB1Q969K4 478 aaPredicted RBP12.58□□□□□ -0.4
RNF40-212ENST00000602784 SLC35B4Q969S0 331 aa12.58□□□□□ -0.4
RNF40-212ENST00000602784 RELTQ969Z4 430 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms