RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 SCMH1Q96GD3 660 aa18.68■□□□□ 0.58
PNKP-215ENST00000600910 FRMD6Q96NE9 622 aa18.68■□□□□ 0.58
PNKP-215ENST00000600910 SDHAF3Q9NRP4 125 aa18.68■□□□□ 0.58
PNKP-215ENST00000600910 KLHL28Q9NXS3 571 aa18.68■□□□□ 0.58
PNKP-215ENST00000600910 DNAJB12Q9NXW2 375 aaKnown RBP18.68■□□□□ 0.58
PNKP-215ENST00000600910 PPP4R1LQ9P1A2 415 aa18.68■□□□□ 0.58
PNKP-215ENST00000600910 TUBD1Q9UJT1 453 aa18.68■□□□□ 0.58
PNKP-215ENST00000600910 SLC13A4Q9UKG4 626 aa18.68■□□□□ 0.58
PNKP-215ENST00000600910 KLF13Q9Y2Y9 288 aaPredicted RBP18.68■□□□□ 0.58
PNKP-215ENST00000600910 SH3GLB1Q9Y371 365 aa18.68■□□□□ 0.58
PNKP-215ENST00000600910 TRAV17A0A0B4J275 112 aa18.67■□□□□ 0.58
PNKP-215ENST00000600910 SYT5O00445 386 aa18.67■□□□□ 0.58
PNKP-215ENST00000600910 OIP5O43482 229 aa18.67■□□□□ 0.58
PNKP-215ENST00000600910 HCRTR2O43614 444 aa18.67■□□□□ 0.58
PNKP-215ENST00000600910 CYP7B1O75881 506 aa18.67■□□□□ 0.58
PNKP-215ENST00000600910 C8BP07358 591 aa18.67■□□□□ 0.58
PNKP-215ENST00000600910 TNFRSF1BP20333 461 aa18.67■□□□□ 0.58
PNKP-215ENST00000600910 RHDQ02161 417 aa18.67■□□□□ 0.58
PNKP-215ENST00000600910 ZNF117Q03924 483 aa18.67■□□□□ 0.58
PNKP-215ENST00000600910 KPNB1Q14974 876 aaKnown RBP18.67■□□□□ 0.58
PNKP-215ENST00000600910 ZSWIM7Q19AV6 140 aa18.67■□□□□ 0.58
PNKP-215ENST00000600910 CBLN3Q6UW01 205 aa18.67■□□□□ 0.58
PNKP-215ENST00000600910 ASB18Q6ZVZ8 466 aa18.67■□□□□ 0.58
PNKP-215ENST00000600910 PACS2Q86VP3 889 aa18.67■□□□□ 0.58
PNKP-215ENST00000600910 GRAMD2AQ8IUY3 354 aa18.67■□□□□ 0.58
PNKP-215ENST00000600910 SULF2Q8IWU5 870 aa18.67■□□□□ 0.58
PNKP-215ENST00000600910 TMEM178AQ8NBL3 297 aa18.67■□□□□ 0.58
PNKP-215ENST00000600910 FAM71CQ8NEG0 241 aa18.67■□□□□ 0.58
PNKP-215ENST00000600910 C9orf43Q8TAL5 461 aaPredicted RBP18.67■□□□□ 0.58
PNKP-215ENST00000600910 SH3YL1Q96HL8 342 aaPredicted RBP18.67■□□□□ 0.58
PNKP-215ENST00000600910 PYURFQ96I23 114 aa18.67■□□□□ 0.58
PNKP-215ENST00000600910 WFDC6Q9BQY6 131 aa18.67■□□□□ 0.58
PNKP-215ENST00000600910 ADNPQ9H2P0 1102 aa18.67■□□□□ 0.58
PNKP-215ENST00000600910 HRH3Q9Y5N1 445 aa18.67■□□□□ 0.58
PNKP-215ENST00000600910 BOD1L1Q8NFC6 3051 aa18.67■□□□□ 0.58
PNKP-215ENST00000600910 FRS3O43559 492 aa18.67■□□□□ 0.58
PNKP-215ENST00000600910 GMFGO60234 142 aa18.67■□□□□ 0.58
PNKP-215ENST00000600910 MASP1P48740 699 aa18.67■□□□□ 0.58
PNKP-215ENST00000600910 SKP2Q13309 424 aa18.67■□□□□ 0.58
PNKP-215ENST00000600910 CCNIQ14094 377 aa18.67■□□□□ 0.58
PNKP-215ENST00000600910 RBMXL3Q8N7X1 1067 aaKnown RBP18.67■□□□□ 0.58
PNKP-215ENST00000600910 ARSGQ96EG1 525 aa18.67■□□□□ 0.58
PNKP-215ENST00000600910 TMEM41AQ96HV5 264 aa18.67■□□□□ 0.58
PNKP-215ENST00000600910 JSRP1Q96MG2 331 aaPredicted RBP18.67■□□□□ 0.58
PNKP-215ENST00000600910 FAM173AQ9BQD7 235 aa18.67■□□□□ 0.58
PNKP-215ENST00000600910 DENND2DQ9H6A0 471 aaPredicted RBP18.67■□□□□ 0.58
PNKP-215ENST00000600910 ZNF71Q9NQZ8 489 aaPredicted RBP18.67■□□□□ 0.58
PNKP-215ENST00000600910 NINQ8N4C6 2090 aa18.66■□□□□ 0.58
PNKP-215ENST00000600910 TCRBV3S1A0A5B6 114 aa18.66■□□□□ 0.58
PNKP-215ENST00000600910 PINLYPA6NC86 204 aa18.66■□□□□ 0.58
PNKP-215ENST00000600910 B4DXG7 233 aa18.66■□□□□ 0.58
PNKP-215ENST00000600910 M0R3H8 397 aa18.66■□□□□ 0.58
PNKP-215ENST00000600910 GNB5O14775 395 aa18.66■□□□□ 0.58
PNKP-215ENST00000600910 PEX1O43933 1283 aa18.66■□□□□ 0.58
PNKP-215ENST00000600910 EIF4E2O60573 245 aaKnown RBP18.66■□□□□ 0.58
PNKP-215ENST00000600910 DPM1O60762 260 aa18.66■□□□□ 0.58
PNKP-215ENST00000600910 TRIM3O75382 744 aaPredicted RBP18.66■□□□□ 0.58
PNKP-215ENST00000600910 GKN3PP0CG01 181 aa18.66■□□□□ 0.58
PNKP-215ENST00000600910 OR1E2P47887 323 aa18.66■□□□□ 0.58
PNKP-215ENST00000600910 ACTR3P61158 418 aa18.66■□□□□ 0.58
PNKP-215ENST00000600910 IFI44LQ53G44 452 aa18.66■□□□□ 0.58
PNKP-215ENST00000600910 TMCO5AQ8N6Q1 288 aa18.66■□□□□ 0.58
PNKP-215ENST00000600910 WDSUB1Q8N9V3 476 aa18.66■□□□□ 0.58
PNKP-215ENST00000600910 OR2M7Q8NG81 312 aa18.66■□□□□ 0.58
PNKP-215ENST00000600910 VANGL1Q8TAA9 524 aaPredicted RBP18.66■□□□□ 0.58
PNKP-215ENST00000600910 SEPHS2Q99611 448 aa18.66■□□□□ 0.58
PNKP-215ENST00000600910 ARHGDIGQ99819 225 aa18.66■□□□□ 0.58
PNKP-215ENST00000600910 LAT2Q9GZY6 243 aa18.66■□□□□ 0.58
PNKP-215ENST00000600910 TUBA8Q9NY65 449 aaPredicted RBP18.66■□□□□ 0.58
PNKP-215ENST00000600910 PCDHGB6Q9Y5F9 930 aa18.66■□□□□ 0.58
PNKP-215ENST00000600910 ITPR1Q14643 2758 aa18.66■□□□□ 0.58
PNKP-215ENST00000600910 KLRC4-KLRK1H3BQV0 150 aa18.65■□□□□ 0.58
PNKP-215ENST00000600910 SNPHO15079 494 aa18.65■□□□□ 0.58
PNKP-215ENST00000600910 ADAM11O75078 769 aa18.65■□□□□ 0.58
PNKP-215ENST00000600910 CCR4P51679 360 aa18.65■□□□□ 0.58
PNKP-215ENST00000600910 NRF1Q16656 503 aa18.65■□□□□ 0.58
PNKP-215ENST00000600910 Q6ZS92 163 aa18.65■□□□□ 0.58
PNKP-215ENST00000600910 CARM1Q86X55 608 aa18.65■□□□□ 0.58
PNKP-215ENST00000600910 LACC1Q8IV20 430 aa18.65■□□□□ 0.58
PNKP-215ENST00000600910 OR4D11Q8NGI4 311 aa18.65■□□□□ 0.58
PNKP-215ENST00000600910 OR1J4Q8NGS1 313 aa18.65■□□□□ 0.58
PNKP-215ENST00000600910 B4GALNT2Q8NHY0 566 aa18.65■□□□□ 0.58
PNKP-215ENST00000600910 GEMIN6Q8WXD5 167 aaKnown RBP18.65■□□□□ 0.58
PNKP-215ENST00000600910 ZNF597Q96LX8 424 aa18.65■□□□□ 0.58
PNKP-215ENST00000600910 MFRPQ9BY79 579 aa18.65■□□□□ 0.58
PNKP-215ENST00000600910 EXOSC3Q9NQT5 275 aaKnown RBP18.65■□□□□ 0.58
PNKP-215ENST00000600910 MED11Q9P086 117 aa18.65■□□□□ 0.58
PNKP-215ENST00000600910 ICAM5Q9UMF0 924 aa18.65■□□□□ 0.58
PNKP-215ENST00000600910 SLC9A8Q9Y2E8 581 aa18.65■□□□□ 0.58
PNKP-215ENST00000600910 USP24Q9UPU5 2620 aa18.65■□□□□ 0.58
PNKP-215ENST00000600910 IGLV3-32A0A0A0MS00 114 aa18.64■□□□□ 0.57
PNKP-215ENST00000600910 DHRS12A0PJE2 317 aa18.64■□□□□ 0.57
PNKP-215ENST00000600910 PRG2P13727 222 aa18.64■□□□□ 0.57
PNKP-215ENST00000600910 P2RX1P51575 399 aa18.64■□□□□ 0.57
PNKP-215ENST00000600910 RGS8P57771 180 aaPredicted RBP18.64■□□□□ 0.57
PNKP-215ENST00000600910 HOXC5Q00444 222 aa18.64■□□□□ 0.57
PNKP-215ENST00000600910 ZNF169Q14929 603 aaPredicted RBP18.64■□□□□ 0.57
PNKP-215ENST00000600910 PLCZ1Q86YW0 608 aa18.64■□□□□ 0.57
PNKP-215ENST00000600910 RBM45Q8IUH3 476 aaKnown RBP18.64■□□□□ 0.57
PNKP-215ENST00000600910 CANT1Q8WVQ1 401 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms