RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, human

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHKBP1-222	ENST00000600320	IFT52	Q9Y366	437 aa		18.23	■□□□□ 0.51
SHKBP1-222	ENST00000600320	PCNX3	Q9H6A9	2034 aa		18.22	■□□□□ 0.51
SHKBP1-222	ENST00000600320	NCKAP5	O14513	1909 aa		18.22	■□□□□ 0.51
SHKBP1-222	ENST00000600320	TMEM229A	B2RXF0	380 aa		18.22	■□□□□ 0.51
SHKBP1-222	ENST00000600320	GTPBP1	O00178	669 aa	Known RBP	18.22	■□□□□ 0.51
SHKBP1-222	ENST00000600320	ZNF264	O43296	627 aa		18.22	■□□□□ 0.51
SHKBP1-222	ENST00000600320	HCRTR2	O43614	444 aa		18.22	■□□□□ 0.51
SHKBP1-222	ENST00000600320	SERPINB7	O75635	380 aa		18.22	■□□□□ 0.51
SHKBP1-222	ENST00000600320	DNAJC8	O75937	253 aa	Predicted RBP	18.22	■□□□□ 0.51
SHKBP1-222	ENST00000600320	WISP2	O76076	250 aa		18.22	■□□□□ 0.51
SHKBP1-222	ENST00000600320	UBTFL6	P0CB48	400 aa	Predicted RBP	18.22	■□□□□ 0.51
SHKBP1-222	ENST00000600320	CD247	P20963	164 aa		18.22	■□□□□ 0.51
SHKBP1-222	ENST00000600320	ELAVL4	P26378	380 aa	Known RBP	18.22	■□□□□ 0.51
SHKBP1-222	ENST00000600320	PRKAR1B	P31321	381 aa		18.22	■□□□□ 0.51
SHKBP1-222	ENST00000600320	RASSF2	P50749	326 aa		18.22	■□□□□ 0.51
SHKBP1-222	ENST00000600320	SKP2	Q13309	424 aa		18.22	■□□□□ 0.51
SHKBP1-222	ENST00000600320	LARS2	Q15031	903 aa	Known RBP	18.22	■□□□□ 0.51
SHKBP1-222	ENST00000600320	HYAL4	Q2M3T9	481 aa		18.22	■□□□□ 0.51
SHKBP1-222	ENST00000600320	SPATS1	Q496A3	300 aa		18.22	■□□□□ 0.51
SHKBP1-222	ENST00000600320	LRRC23	Q53EV4	343 aa	Predicted RBP	18.22	■□□□□ 0.51
SHKBP1-222	ENST00000600320	RNF220	Q5VTB9	566 aa		18.22	■□□□□ 0.51
SHKBP1-222	ENST00000600320	GLYAT	Q6IB77	296 aa		18.22	■□□□□ 0.51
SHKBP1-222	ENST00000600320	PGM2L1	Q6PCE3	622 aa		18.22	■□□□□ 0.51
SHKBP1-222	ENST00000600320	DHRS4L2	Q6PKH6	230 aa		18.22	■□□□□ 0.51
SHKBP1-222	ENST00000600320	EIF3M	Q7L2H7	374 aa	Known RBP	18.22	■□□□□ 0.51
SHKBP1-222	ENST00000600320	ARMC8	Q8IUR7	673 aa		18.22	■□□□□ 0.51
SHKBP1-222	ENST00000600320	TNIP2	Q8NFZ5	429 aa		18.22	■□□□□ 0.51
SHKBP1-222	ENST00000600320	OR4K17	Q8NGC6	315 aa		18.22	■□□□□ 0.51
SHKBP1-222	ENST00000600320	B4GALNT2	Q8NHY0	566 aa		18.22	■□□□□ 0.51
SHKBP1-222	ENST00000600320	SPATA5L1	Q9BVQ7	753 aa		18.22	■□□□□ 0.51
SHKBP1-222	ENST00000600320	LAT2	Q9GZY6	243 aa		18.22	■□□□□ 0.51
SHKBP1-222	ENST00000600320	LRMDA	Q9H2I8	198 aa		18.22	■□□□□ 0.51
SHKBP1-222	ENST00000600320	UBQLN3	Q9H347	655 aa		18.22	■□□□□ 0.51
SHKBP1-222	ENST00000600320	ZNF703	Q9H7S9	590 aa	Predicted RBP	18.22	■□□□□ 0.51
SHKBP1-222	ENST00000600320	CACYBP	Q9HB71	228 aa	Known RBP	18.22	■□□□□ 0.51
SHKBP1-222	ENST00000600320	DNAJB12	Q9NXW2	375 aa	Known RBP	18.22	■□□□□ 0.51
SHKBP1-222	ENST00000600320	ICAM5	Q9UMF0	924 aa		18.22	■□□□□ 0.51
SHKBP1-222	ENST00000600320	ZNF232	Q9UNY5	417 aa		18.22	■□□□□ 0.51
SHKBP1-222	ENST00000600320	SLC35A3	Q9Y2D2	325 aa		18.22	■□□□□ 0.51
SHKBP1-222	ENST00000600320	CDHR4	A6H8M9	788 aa		18.21	■□□□□ 0.51
SHKBP1-222	ENST00000600320	ADAM11	O75078	769 aa		18.21	■□□□□ 0.51
SHKBP1-222	ENST00000600320	CYP7B1	O75881	506 aa		18.21	■□□□□ 0.51
SHKBP1-222	ENST00000600320	CELA3A	P09093	270 aa		18.21	■□□□□ 0.51
SHKBP1-222	ENST00000600320	ME2	P23368	584 aa		18.21	■□□□□ 0.51
SHKBP1-222	ENST00000600320	PPIA	P62937	165 aa	Known RBP	18.21	■□□□□ 0.51
SHKBP1-222	ENST00000600320	DUSP7	Q16829	419 aa		18.21	■□□□□ 0.51
SHKBP1-222	ENST00000600320	ASRGL1	Q7L266	308 aa		18.21	■□□□□ 0.51
SHKBP1-222	ENST00000600320	CMIP	Q8IY22	773 aa		18.21	■□□□□ 0.51
SHKBP1-222	ENST00000600320	ZNF524	Q96C55	264 aa		18.21	■□□□□ 0.51
SHKBP1-222	ENST00000600320	WFDC6	Q9BQY6	131 aa		18.21	■□□□□ 0.51
SHKBP1-222	ENST00000600320	PIEZO2	Q9H5I5	2752 aa		18.21	■□□□□ 0.51
SHKBP1-222	ENST00000600320	ATM	Q13315	3056 aa		18.2	■□□□□ 0.5
SHKBP1-222	ENST00000600320	ARPC2	O15144	300 aa		18.2	■□□□□ 0.5
SHKBP1-222	ENST00000600320	FRS3	O43559	492 aa		18.2	■□□□□ 0.5
SHKBP1-222	ENST00000600320	EIF4E2	O60573	245 aa	Known RBP	18.2	■□□□□ 0.5
SHKBP1-222	ENST00000600320	PRB1	P04280	392 aa		18.2	■□□□□ 0.5
SHKBP1-222	ENST00000600320	ZNF24	P17028	368 aa		18.2	■□□□□ 0.5
SHKBP1-222	ENST00000600320	MST1	P26927	711 aa		18.2	■□□□□ 0.5
SHKBP1-222	ENST00000600320	MAGEA5	P43359	124 aa		18.2	■□□□□ 0.5
SHKBP1-222	ENST00000600320	KCNJ5	P48544	419 aa		18.2	■□□□□ 0.5
SHKBP1-222	ENST00000600320	MS4A2	Q01362	244 aa		18.2	■□□□□ 0.5
SHKBP1-222	ENST00000600320	SOWAHC	Q53LP3	525 aa	Predicted RBP	18.2	■□□□□ 0.5
SHKBP1-222	ENST00000600320	CYBRD1	Q53TN4	286 aa		18.2	■□□□□ 0.5
SHKBP1-222	ENST00000600320	TMCO5A	Q8N6Q1	288 aa		18.2	■□□□□ 0.5
SHKBP1-222	ENST00000600320	FAM162A	Q96A26	154 aa		18.2	■□□□□ 0.5
SHKBP1-222	ENST00000600320	SNRNP40	Q96DI7	357 aa	Known RBP	18.2	■□□□□ 0.5
SHKBP1-222	ENST00000600320	PINK1	Q9BXM7	581 aa		18.2	■□□□□ 0.5
SHKBP1-222	ENST00000600320	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	18.2	■□□□□ 0.5
SHKBP1-222	ENST00000600320	ANAPC2	Q9UJX6	822 aa		18.2	■□□□□ 0.5
SHKBP1-222	ENST00000600320	SNX13	Q9Y5W8	968 aa		18.2	■□□□□ 0.5
SHKBP1-222	ENST00000600320	IGSF10	Q6WRI0	2623 aa		18.2	■□□□□ 0.5
SHKBP1-222	ENST00000600320	ACOT7	O00154	380 aa		18.19	■□□□□ 0.5
SHKBP1-222	ENST00000600320	AP3D1	O14617	1153 aa		18.19	■□□□□ 0.5
SHKBP1-222	ENST00000600320	CBR3	O75828	277 aa		18.19	■□□□□ 0.5
SHKBP1-222	ENST00000600320	GKN3P	P0CG01	181 aa		18.19	■□□□□ 0.5
SHKBP1-222	ENST00000600320	ENDOU	P21128	410 aa	Known RBP	18.19	■□□□□ 0.5
SHKBP1-222	ENST00000600320	ATP6V1B2	P21281	511 aa		18.19	■□□□□ 0.5
SHKBP1-222	ENST00000600320	GDF1	P27539	372 aa		18.19	■□□□□ 0.5
SHKBP1-222	ENST00000600320	P2RX1	P51575	399 aa		18.19	■□□□□ 0.5
SHKBP1-222	ENST00000600320	ALDH6A1	Q02252	535 aa	Known RBP	18.19	■□□□□ 0.5
SHKBP1-222	ENST00000600320	BNIP2	Q12982	314 aa		18.19	■□□□□ 0.5
SHKBP1-222	ENST00000600320	ZNF324B	Q6AW86	544 aa	Predicted RBP	18.19	■□□□□ 0.5
SHKBP1-222	ENST00000600320	ARSK	Q6UWY0	536 aa		18.19	■□□□□ 0.5
SHKBP1-222	ENST00000600320	SLC22A16	Q86VW1	577 aa		18.19	■□□□□ 0.5
SHKBP1-222	ENST00000600320	GRAMD2A	Q8IUY3	354 aa		18.19	■□□□□ 0.5
SHKBP1-222	ENST00000600320	SIAH3	Q8IW03	269 aa		18.19	■□□□□ 0.5
SHKBP1-222	ENST00000600320	ULK2	Q8IYT8	1036 aa		18.19	■□□□□ 0.5
SHKBP1-222	ENST00000600320	FAM109A	Q8N4B1	249 aa		18.19	■□□□□ 0.5
SHKBP1-222	ENST00000600320	OR10Q1	Q8NGQ4	319 aa		18.19	■□□□□ 0.5
SHKBP1-222	ENST00000600320	SLC26A7	Q8TE54	656 aa		18.19	■□□□□ 0.5
SHKBP1-222	ENST00000600320	CCDC124	Q96CT7	223 aa	Known RBP	18.19	■□□□□ 0.5
SHKBP1-222	ENST00000600320	DEFB127	Q9H1M4	99 aa		18.19	■□□□□ 0.5
SHKBP1-222	ENST00000600320	EXOSC3	Q9NQT5	275 aa	Known RBP	18.19	■□□□□ 0.5
SHKBP1-222	ENST00000600320	MAGEL2	Q9UJ55	1249 aa		18.19	■□□□□ 0.5
SHKBP1-222	ENST00000600320	TLN1	Q9Y490	2541 aa	Known RBP	18.19	■□□□□ 0.5
SHKBP1-222	ENST00000600320	HEATR5A	Q86XA9	2040 aa		18.18	■□□□□ 0.5
SHKBP1-222	ENST00000600320	ANKUB1	A6NFN9	424 aa		18.18	■□□□□ 0.5
SHKBP1-222	ENST00000600320	NPIPA5	E9PKD4	350 aa		18.18	■□□□□ 0.5
SHKBP1-222	ENST00000600320	CDC40	O60508	579 aa	Known RBP eCLIP	18.18	■□□□□ 0.5
SHKBP1-222	ENST00000600320	SERPINA1	P01009	418 aa		18.18	■□□□□ 0.5

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