RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 NUFIP1Q9UHK0 495 aaKnown RBP10.72□□□□□ -0.69
ARHGEF1-220ENST00000600274 SLC22A7Q9Y694 548 aa10.72□□□□□ -0.69
ARHGEF1-220ENST00000600274 NUP210Q8TEM1 1887 aaPredicted RBP10.72□□□□□ -0.69
ARHGEF1-220ENST00000600274 MEN1O00255 615 aa10.72□□□□□ -0.69
ARHGEF1-220ENST00000600274 PRODHO43272 600 aa10.72□□□□□ -0.69
ARHGEF1-220ENST00000600274 CHST10O43529 356 aa10.72□□□□□ -0.69
ARHGEF1-220ENST00000600274 KCNJ13O60928 360 aa10.72□□□□□ -0.69
ARHGEF1-220ENST00000600274 LTBRP36941 435 aa10.72□□□□□ -0.69
ARHGEF1-220ENST00000600274 RORCP51449 518 aa10.72□□□□□ -0.69
ARHGEF1-220ENST00000600274 OR1Q1Q15612 314 aa10.72□□□□□ -0.69
ARHGEF1-220ENST00000600274 NDUFA9Q16795 377 aa10.72□□□□□ -0.69
ARHGEF1-220ENST00000600274 DEFB133Q30KQ1 61 aa10.72□□□□□ -0.69
ARHGEF1-220ENST00000600274 KLHL22Q53GT1 634 aa10.72□□□□□ -0.69
ARHGEF1-220ENST00000600274 GDPD3Q7L5L3 318 aa10.72□□□□□ -0.69
ARHGEF1-220ENST00000600274 MARCH9Q86YJ5 346 aa10.72□□□□□ -0.69
ARHGEF1-220ENST00000600274 OMA1Q96E52 524 aa10.72□□□□□ -0.69
ARHGEF1-220ENST00000600274 KLHDC7BQ96G42 594 aa10.72□□□□□ -0.69
ARHGEF1-220ENST00000600274 BARHL1Q9BZE3 327 aa10.72□□□□□ -0.69
ARHGEF1-220ENST00000600274 OR52D1Q9H346 318 aa10.72□□□□□ -0.69
ARHGEF1-220ENST00000600274 STUB1Q9UNE7 303 aa10.72□□□□□ -0.69
ARHGEF1-220ENST00000600274 HRO43593 1189 aa10.71□□□□□ -0.69
ARHGEF1-220ENST00000600274 GPR75O95800 540 aa10.71□□□□□ -0.69
ARHGEF1-220ENST00000600274 LALBAP00709 142 aa10.71□□□□□ -0.69
ARHGEF1-220ENST00000600274 WNT4P56705 351 aa10.71□□□□□ -0.69
ARHGEF1-220ENST00000600274 RNASE12Q5GAN4 147 aaKnown RBP10.71□□□□□ -0.69
ARHGEF1-220ENST00000600274 PRAMEF17Q5VTA0 474 aa10.71□□□□□ -0.69
ARHGEF1-220ENST00000600274 ARL9Q6T311 187 aa10.71□□□□□ -0.69
ARHGEF1-220ENST00000600274 RAB43Q86YS6 212 aa10.71□□□□□ -0.69
ARHGEF1-220ENST00000600274 CDK20Q8IZL9 346 aa10.71□□□□□ -0.69
ARHGEF1-220ENST00000600274 OR2T33Q8NG76 320 aa10.71□□□□□ -0.69
ARHGEF1-220ENST00000600274 UFD1Q92890 307 aa10.71□□□□□ -0.69
ARHGEF1-220ENST00000600274 SPACA7Q96KW9 195 aa10.71□□□□□ -0.69
ARHGEF1-220ENST00000600274 SLC38A3Q99624 504 aa10.71□□□□□ -0.69
ARHGEF1-220ENST00000600274 HINT3Q9NQE9 182 aaKnown RBP10.71□□□□□ -0.69
ARHGEF1-220ENST00000600274 TXNL4BQ9NX01 149 aaKnown RBP10.71□□□□□ -0.69
ARHGEF1-220ENST00000600274 TNFRSF10DQ9UBN6 386 aa10.71□□□□□ -0.69
ARHGEF1-220ENST00000600274 SEC14L4Q9UDX3 406 aa10.71□□□□□ -0.69
ARHGEF1-220ENST00000600274 A0A0J9YY10 115 aa10.71□□□□□ -0.69
ARHGEF1-220ENST00000600274 ZSCAN5BA6NJL1 495 aa10.71□□□□□ -0.69
ARHGEF1-220ENST00000600274 DVL2O14641 736 aa10.71□□□□□ -0.69
ARHGEF1-220ENST00000600274 SLC30A4O14863 429 aa10.71□□□□□ -0.69
ARHGEF1-220ENST00000600274 SOX30O94993 753 aa10.71□□□□□ -0.69
ARHGEF1-220ENST00000600274 POU6F2P78424 691 aaPredicted RBP10.71□□□□□ -0.69
ARHGEF1-220ENST00000600274 KCNAB1Q14722 419 aa10.71□□□□□ -0.69
ARHGEF1-220ENST00000600274 NXNL2Q5VZ03 156 aa10.71□□□□□ -0.69
ARHGEF1-220ENST00000600274 WDR88Q6ZMY6 472 aa10.71□□□□□ -0.69
ARHGEF1-220ENST00000600274 ZNF517Q6ZMY9 492 aaPredicted RBP10.71□□□□□ -0.69
ARHGEF1-220ENST00000600274 CXXC5Q7LFL8 322 aaKnown RBP10.71□□□□□ -0.69
ARHGEF1-220ENST00000600274 VWA5B2Q8N398 1253 aa10.71□□□□□ -0.69
ARHGEF1-220ENST00000600274 KIAA1958Q8N8K9 716 aa10.71□□□□□ -0.69
ARHGEF1-220ENST00000600274 PROKR2Q8NFJ6 384 aa10.71□□□□□ -0.69
ARHGEF1-220ENST00000600274 ENKURQ8TC29 256 aa10.71□□□□□ -0.69
ARHGEF1-220ENST00000600274 SPRYD4Q8WW59 207 aaPredicted RBP10.71□□□□□ -0.69
ARHGEF1-220ENST00000600274 PHF21AQ96BD5 680 aa10.71□□□□□ -0.69
ARHGEF1-220ENST00000600274 CD180Q99467 661 aa10.71□□□□□ -0.69
ARHGEF1-220ENST00000600274 IRF2BPLQ9H1B7 796 aa10.71□□□□□ -0.69
ARHGEF1-220ENST00000600274 ZNF576Q9H609 170 aa10.71□□□□□ -0.69
ARHGEF1-220ENST00000600274 FBXL4Q9UKA2 621 aa10.71□□□□□ -0.69
ARHGEF1-220ENST00000600274 ACAD8Q9UKU7 415 aa10.71□□□□□ -0.69
ARHGEF1-220ENST00000600274 KLK4Q9Y5K2 254 aa10.71□□□□□ -0.69
ARHGEF1-220ENST00000600274 TICRRQ7Z2Z1 1910 aa10.71□□□□□ -0.7
ARHGEF1-220ENST00000600274 COL6A3P12111 3177 aa10.71□□□□□ -0.7
ARHGEF1-220ENST00000600274 A0A1W2PQL4 384 aaPredicted RBP10.71□□□□□ -0.7
ARHGEF1-220ENST00000600274 ARRDC5A6NEK1 342 aa10.71□□□□□ -0.7
ARHGEF1-220ENST00000600274 OR6C70A6NIJ9 312 aa10.71□□□□□ -0.7
ARHGEF1-220ENST00000600274 C12orf71A8MTZ7 269 aa10.71□□□□□ -0.7
ARHGEF1-220ENST00000600274 FAM171A2A8MVW0 826 aa10.71□□□□□ -0.7
ARHGEF1-220ENST00000600274 MAKP20794 623 aa10.71□□□□□ -0.7
ARHGEF1-220ENST00000600274 HTR2AP28223 471 aa10.71□□□□□ -0.7
ARHGEF1-220ENST00000600274 OMPP47874 163 aa10.71□□□□□ -0.7
ARHGEF1-220ENST00000600274 RHAGQ02094 409 aa10.71□□□□□ -0.7
ARHGEF1-220ENST00000600274 SLC3A1Q07837 685 aa10.71□□□□□ -0.7
ARHGEF1-220ENST00000600274 MEDAGQ5VYS4 303 aa10.71□□□□□ -0.7
ARHGEF1-220ENST00000600274 FAM26EQ8N5C1 309 aa10.71□□□□□ -0.7
ARHGEF1-220ENST00000600274 TSTD1Q8NFU3 115 aa10.71□□□□□ -0.7
ARHGEF1-220ENST00000600274 TMEM239Q8WW34 195 aa10.71□□□□□ -0.7
ARHGEF1-220ENST00000600274 OSTF1Q92882 214 aa10.71□□□□□ -0.7
ARHGEF1-220ENST00000600274 WSB2Q9NYS7 404 aaPredicted RBP10.71□□□□□ -0.7
ARHGEF1-220ENST00000600274 CRNNQ9UBG3 495 aaPredicted RBP10.71□□□□□ -0.7
ARHGEF1-220ENST00000600274 KCNE5Q9UJ90 142 aa10.71□□□□□ -0.7
ARHGEF1-220ENST00000600274 SAGE2PA6NJ88 616 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 PSMD9O00233 223 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 PPP1R3DO95685 299 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 TEAD1P28347 426 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 UGT2B10P36537 528 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 RPL4P36578 427 aaKnown RBP10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 CRYBB2P43320 205 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 HCCSP53701 268 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 CRYZQ08257 329 aaKnown RBP10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 PGGHGQ32M88 737 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 USP53Q70EK8 1073 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 BAHD1Q8TBE0 780 aaPredicted RBP10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 DCLRE1CQ96SD1 692 aaKnown RBP10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 SYNDIG1Q9H7V2 258 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 ISG20L2Q9H9L3 353 aaKnown RBP10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 MUTYHQ9UIF7 546 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 SCML1Q9UN30 329 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 N6AMT1Q9Y5N5 214 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 ALPK3Q96L96 1907 aa10.7□□□□□ -0.7
ARHGEF1-220ENST00000600274 CCDC182A6NF36 153 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms