RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 NCMAPQ5T1S8 102 aa18.85■□□□□ 0.61
PNKP-212ENST00000599454 SFRP5Q5T4F7 317 aa18.85■□□□□ 0.61
PNKP-212ENST00000599454 ANKRD26P1Q6NSI1 321 aa18.85■□□□□ 0.61
PNKP-212ENST00000599454 TFAP2EQ6VUC0 442 aa18.85■□□□□ 0.61
PNKP-212ENST00000599454 SZRD1Q7Z422 152 aa18.85■□□□□ 0.61
PNKP-212ENST00000599454 MTERF4Q7Z6M4 381 aaKnown RBP18.85■□□□□ 0.61
PNKP-212ENST00000599454 COX18Q8N8Q8 333 aa18.85■□□□□ 0.61
PNKP-212ENST00000599454 RAB3IL1Q8TBN0 382 aa18.85■□□□□ 0.61
PNKP-212ENST00000599454 MZB1Q8WU39 189 aa18.85■□□□□ 0.61
PNKP-212ENST00000599454 ROBO4Q8WZ75 1007 aa18.85■□□□□ 0.61
PNKP-212ENST00000599454 HSD17B8Q92506 261 aa18.85■□□□□ 0.61
PNKP-212ENST00000599454 FCRL1Q96LA6 429 aa18.85■□□□□ 0.61
PNKP-212ENST00000599454 REPIN1Q9BWE0 567 aaKnown RBP18.85■□□□□ 0.61
PNKP-212ENST00000599454 FBXO34Q9NWN3 711 aa18.85■□□□□ 0.61
PNKP-212ENST00000599454 KLHL13Q9P2N7 655 aa18.85■□□□□ 0.61
PNKP-212ENST00000599454 FESP07332 822 aa18.84■□□□□ 0.61
PNKP-212ENST00000599454 NEFHP12036 1026 aa18.84■□□□□ 0.61
PNKP-212ENST00000599454 DDX5P17844 614 aaKnown RBP18.84■□□□□ 0.61
PNKP-212ENST00000599454 PDE7AQ13946 482 aa18.84■□□□□ 0.61
PNKP-212ENST00000599454 P2RY6Q15077 328 aa18.84■□□□□ 0.61
PNKP-212ENST00000599454 CCDC153Q494R4 210 aa18.84■□□□□ 0.61
PNKP-212ENST00000599454 ZNF385BQ569K4 471 aa18.84■□□□□ 0.61
PNKP-212ENST00000599454 EXOSC6Q5RKV6 272 aaKnown RBP18.84■□□□□ 0.61
PNKP-212ENST00000599454 DNAJC14Q6Y2X3 702 aaPredicted RBP18.84■□□□□ 0.61
PNKP-212ENST00000599454 RNF165Q6ZSG1 346 aa18.84■□□□□ 0.61
PNKP-212ENST00000599454 ZAR1Q86SH2 424 aa18.84■□□□□ 0.61
PNKP-212ENST00000599454 HOMEZQ8IX15 550 aa18.84■□□□□ 0.61
PNKP-212ENST00000599454 LILRB1Q8NHL6 650 aaPredicted RBP18.84■□□□□ 0.61
PNKP-212ENST00000599454 ABHD3Q8WU67 409 aa18.84■□□□□ 0.61
PNKP-212ENST00000599454 GTPBP3Q969Y2 492 aaKnown RBP18.84■□□□□ 0.61
PNKP-212ENST00000599454 BTBD2Q9BX70 525 aa18.84■□□□□ 0.61
PNKP-212ENST00000599454 SH3BP4Q9P0V3 963 aa18.84■□□□□ 0.61
PNKP-212ENST00000599454 MXRA5Q9NR99 2828 aa18.83■□□□□ 0.61
PNKP-212ENST00000599454 RNF223E7ERA6 249 aa18.83■□□□□ 0.6
PNKP-212ENST00000599454 KIF2AO00139 706 aaPredicted RBP18.83■□□□□ 0.6
PNKP-212ENST00000599454 CLOCKO15516 846 aa18.83■□□□□ 0.6
PNKP-212ENST00000599454 PROCP04070 461 aa18.83■□□□□ 0.6
PNKP-212ENST00000599454 TP53P04637 393 aaPredicted RBP18.83■□□□□ 0.6
PNKP-212ENST00000599454 DANCRP0C864 163 aa18.83■□□□□ 0.6
PNKP-212ENST00000599454 SFTPDP35247 375 aa18.83■□□□□ 0.6
PNKP-212ENST00000599454 SUMO3P55854 103 aaPredicted RBP18.83■□□□□ 0.6
PNKP-212ENST00000599454 POU6F2P78424 691 aaPredicted RBP18.83■□□□□ 0.6
PNKP-212ENST00000599454 TAB1Q15750 504 aa18.83■□□□□ 0.6
PNKP-212ENST00000599454 TDRPQ86YL5 185 aa18.83■□□□□ 0.6
PNKP-212ENST00000599454 FBXO30Q8TB52 745 aa18.83■□□□□ 0.6
PNKP-212ENST00000599454 SMAP2Q8WU79 429 aaPredicted RBP18.83■□□□□ 0.6
PNKP-212ENST00000599454 MTERF3Q96E29 417 aa18.83■□□□□ 0.6
PNKP-212ENST00000599454 C16orf45Q96MC5 204 aaPredicted RBP18.83■□□□□ 0.6
PNKP-212ENST00000599454 STACQ99469 402 aa18.83■□□□□ 0.6
PNKP-212ENST00000599454 POTEKPQ9BYX7 375 aa18.83■□□□□ 0.6
PNKP-212ENST00000599454 REG4Q9BYZ8 158 aa18.83■□□□□ 0.6
PNKP-212ENST00000599454 TNFRSF12AQ9NP84 129 aa18.83■□□□□ 0.6
PNKP-212ENST00000599454 DUSP22Q9NRW4 184 aa18.83■□□□□ 0.6
PNKP-212ENST00000599454 GIN1Q9NXP7 522 aa18.83■□□□□ 0.6
PNKP-212ENST00000599454 TMED5Q9Y3A6 229 aa18.83■□□□□ 0.6
PNKP-212ENST00000599454 ALPK2Q86TB3 2170 aa18.82■□□□□ 0.6
PNKP-212ENST00000599454 AKAP10O43572 662 aa18.82■□□□□ 0.6
PNKP-212ENST00000599454 PRKD3O94806 890 aa18.82■□□□□ 0.6
PNKP-212ENST00000599454 SOD3P08294 240 aa18.82■□□□□ 0.6
PNKP-212ENST00000599454 SDC1P18827 310 aa18.82■□□□□ 0.6
PNKP-212ENST00000599454 ASMTP46597 345 aa18.82■□□□□ 0.6
PNKP-212ENST00000599454 FOXF1Q12946 379 aa18.82■□□□□ 0.6
PNKP-212ENST00000599454 MLC1Q15049 377 aa18.82■□□□□ 0.6
PNKP-212ENST00000599454 CD226Q15762 336 aa18.82■□□□□ 0.6
PNKP-212ENST00000599454 ZNF672Q499Z4 452 aaPredicted RBP18.82■□□□□ 0.6
PNKP-212ENST00000599454 ALKBH2Q6NS38 261 aa18.82■□□□□ 0.6
PNKP-212ENST00000599454 FCRLAQ7L513 359 aa18.82■□□□□ 0.6
PNKP-212ENST00000599454 R3HCC1LQ7Z5L2 792 aaKnown RBP18.82■□□□□ 0.6
PNKP-212ENST00000599454 TUSC5Q8IXB3 177 aa18.82■□□□□ 0.6
PNKP-212ENST00000599454 SLC43A2Q8N370 569 aa18.82■□□□□ 0.6
PNKP-212ENST00000599454 CEP112Q8N8E3 955 aa18.82■□□□□ 0.6
PNKP-212ENST00000599454 JADE3Q92613 823 aa18.82■□□□□ 0.6
PNKP-212ENST00000599454 KISS1RQ969F8 398 aaPredicted RBP18.82■□□□□ 0.6
PNKP-212ENST00000599454 TSSK3Q96PN8 268 aa18.82■□□□□ 0.6
PNKP-212ENST00000599454 HOXD1Q9GZZ0 328 aa18.82■□□□□ 0.6
PNKP-212ENST00000599454 L2HGDHQ9H9P8 463 aa18.82■□□□□ 0.6
PNKP-212ENST00000599454 OXSMQ9NWU1 459 aa18.82■□□□□ 0.6
PNKP-212ENST00000599454 TBK1Q9UHD2 729 aa18.82■□□□□ 0.6
PNKP-212ENST00000599454 ACTL7BQ9Y614 415 aa18.82■□□□□ 0.6
PNKP-212ENST00000599454 GPC6Q9Y625 555 aaPredicted RBP18.82■□□□□ 0.6
PNKP-212ENST00000599454 A0A1W2PP18 115 aa18.81■□□□□ 0.6
PNKP-212ENST00000599454 H3BNH8 94 aa18.81■□□□□ 0.6
PNKP-212ENST00000599454 ZNF195O14628 629 aa18.81■□□□□ 0.6
PNKP-212ENST00000599454 TLX2O43763 284 aaPredicted RBP18.81■□□□□ 0.6
PNKP-212ENST00000599454 YES1P07947 543 aa18.81■□□□□ 0.6
PNKP-212ENST00000599454 SHC1P29353 583 aa18.81■□□□□ 0.6
PNKP-212ENST00000599454 CCT5P48643 541 aa18.81■□□□□ 0.6
PNKP-212ENST00000599454 ZNF117Q03924 483 aa18.81■□□□□ 0.6
PNKP-212ENST00000599454 CCNJQ5T5M9 372 aa18.81■□□□□ 0.6
PNKP-212ENST00000599454 CLEC6AQ6EIG7 209 aa18.81■□□□□ 0.6
PNKP-212ENST00000599454 SSX8Q7RTT4 187 aa18.81■□□□□ 0.6
PNKP-212ENST00000599454 NUFIP2Q7Z417 695 aaKnown RBP18.81■□□□□ 0.6
PNKP-212ENST00000599454 IFT20Q8IY31 132 aa18.81■□□□□ 0.6
PNKP-212ENST00000599454 BANPQ8N9N5 519 aa18.81■□□□□ 0.6
PNKP-212ENST00000599454 ZNF527Q8NB42 609 aa18.81■□□□□ 0.6
PNKP-212ENST00000599454 PIWIL2Q8TC59 973 aaKnown RBP18.81■□□□□ 0.6
PNKP-212ENST00000599454 PHOSPHO1Q8TCT1 267 aa18.81■□□□□ 0.6
PNKP-212ENST00000599454 C16orf58Q96GQ5 468 aa18.81■□□□□ 0.6
PNKP-212ENST00000599454 SRXN1Q9BYN0 137 aa18.81■□□□□ 0.6
PNKP-212ENST00000599454 SLCO5A1Q9H2Y9 848 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms