RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 PABPC4LP0CB38 370 aaKnown RBP9.59□□□□□ -0.87
LIG1-210ENST00000596332 ESRRAP11474 423 aaPredicted RBP9.59□□□□□ -0.87
LIG1-210ENST00000596332 PRG2P13727 222 aa9.59□□□□□ -0.87
LIG1-210ENST00000596332 NID1P14543 1247 aa9.59□□□□□ -0.87
LIG1-210ENST00000596332 ZNF24P17028 368 aa9.59□□□□□ -0.87
LIG1-210ENST00000596332 CALB2P22676 271 aa9.59□□□□□ -0.87
LIG1-210ENST00000596332 ELAVL4P26378 380 aaKnown RBP9.59□□□□□ -0.87
LIG1-210ENST00000596332 SRD5A2P31213 254 aa9.59□□□□□ -0.87
LIG1-210ENST00000596332 ANXA11P50995 505 aaKnown RBP9.59□□□□□ -0.87
LIG1-210ENST00000596332 ZNF136P52737 540 aa9.59□□□□□ -0.87
LIG1-210ENST00000596332 EEFSECP57772 596 aaKnown RBP9.59□□□□□ -0.87
LIG1-210ENST00000596332 ALDH6A1Q02252 535 aaKnown RBP9.59□□□□□ -0.87
LIG1-210ENST00000596332 VEZF1Q14119 521 aa9.59□□□□□ -0.87
LIG1-210ENST00000596332 MRPL2Q5T653 305 aaKnown RBP9.59□□□□□ -0.87
LIG1-210ENST00000596332 PGM2L1Q6PCE3 622 aa9.59□□□□□ -0.87
LIG1-210ENST00000596332 YRDCQ86U90 279 aaKnown RBP9.59□□□□□ -0.87
LIG1-210ENST00000596332 TSPYL5Q86VY4 417 aaPredicted RBP9.59□□□□□ -0.87
LIG1-210ENST00000596332 SPPL2CQ8IUH8 684 aa9.59□□□□□ -0.87
LIG1-210ENST00000596332 GRAMD2AQ8IUY3 354 aa9.59□□□□□ -0.87
LIG1-210ENST00000596332 FAM109AQ8N4B1 249 aa9.59□□□□□ -0.87
LIG1-210ENST00000596332 RNF148Q8N7C7 305 aa9.59□□□□□ -0.87
LIG1-210ENST00000596332 C11orf65Q8NCR3 313 aa9.59□□□□□ -0.87
LIG1-210ENST00000596332 FAM156AQ8NDB6 213 aa9.59□□□□□ -0.87
LIG1-210ENST00000596332 HIPK4Q8NE63 616 aa9.59□□□□□ -0.87
LIG1-210ENST00000596332 FAM83FQ8NEG4 500 aaPredicted RBP9.59□□□□□ -0.87
LIG1-210ENST00000596332 OR4D11Q8NGI4 311 aa9.59□□□□□ -0.87
LIG1-210ENST00000596332 BBS10Q8TAM1 723 aa9.59□□□□□ -0.87
LIG1-210ENST00000596332 PHOSPHO1Q8TCT1 267 aa9.59□□□□□ -0.87
LIG1-210ENST00000596332 C1GALT1C1Q96EU7 318 aa9.59□□□□□ -0.87
LIG1-210ENST00000596332 JSRP1Q96MG2 331 aaPredicted RBP9.59□□□□□ -0.87
LIG1-210ENST00000596332 CDRT15Q96T59 188 aa9.59□□□□□ -0.87
LIG1-210ENST00000596332 SH3GL1Q99961 368 aa9.59□□□□□ -0.87
LIG1-210ENST00000596332 ECSITQ9BQ95 431 aa9.59□□□□□ -0.87
LIG1-210ENST00000596332 SPATA9Q9BWV2 254 aa9.59□□□□□ -0.87
LIG1-210ENST00000596332 TBL1XR1Q9BZK7 514 aa9.59□□□□□ -0.87
LIG1-210ENST00000596332 LAT2Q9GZY6 243 aa9.59□□□□□ -0.87
LIG1-210ENST00000596332 C1orf21Q9H246 121 aa9.59□□□□□ -0.87
LIG1-210ENST00000596332 SLC6A15Q9H2J7 730 aa9.59□□□□□ -0.87
LIG1-210ENST00000596332 OLAHQ9NV23 265 aa9.59□□□□□ -0.87
LIG1-210ENST00000596332 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.59□□□□□ -0.87
LIG1-210ENST00000596332 BOKQ9UMX3 212 aaPredicted RBP9.59□□□□□ -0.87
LIG1-210ENST00000596332 NPIPA1Q9UND3 350 aa9.59□□□□□ -0.87
LIG1-210ENST00000596332 UBR5O95071 2799 aaPredicted RBP9.58□□□□□ -0.88
LIG1-210ENST00000596332 SHISA8B8ZZ34 492 aa9.58□□□□□ -0.88
LIG1-210ENST00000596332 SCDO00767 359 aa9.58□□□□□ -0.88
LIG1-210ENST00000596332 AP3D1O14617 1153 aa9.58□□□□□ -0.88
LIG1-210ENST00000596332 ZNF264O43296 627 aa9.58□□□□□ -0.88
LIG1-210ENST00000596332 EIF4E2O60573 245 aaKnown RBP9.58□□□□□ -0.88
LIG1-210ENST00000596332 SEMA7AO75326 666 aa9.58□□□□□ -0.88
LIG1-210ENST00000596332 DBIP07108 87 aaKnown RBP9.58□□□□□ -0.88
LIG1-210ENST00000596332 THBS1P07996 1170 aa9.58□□□□□ -0.88
LIG1-210ENST00000596332 HSD17B1P14061 328 aa9.58□□□□□ -0.88
LIG1-210ENST00000596332 IL11P20809 199 aa9.58□□□□□ -0.88
LIG1-210ENST00000596332 DPP4P27487 766 aa9.58□□□□□ -0.88
LIG1-210ENST00000596332 MSX1P28360 303 aa9.58□□□□□ -0.88
LIG1-210ENST00000596332 AQP1P29972 269 aa9.58□□□□□ -0.88
LIG1-210ENST00000596332 MSX2P35548 267 aaPredicted RBP9.58□□□□□ -0.88
LIG1-210ENST00000596332 KCNJ5P48544 419 aa9.58□□□□□ -0.88
LIG1-210ENST00000596332 P2RX1P51575 399 aa9.58□□□□□ -0.88
LIG1-210ENST00000596332 DSCR4P56555 118 aaPredicted RBP9.58□□□□□ -0.88
LIG1-210ENST00000596332 ART3Q13508 389 aa9.58□□□□□ -0.88
LIG1-210ENST00000596332 SLC10A1Q14973 349 aa9.58□□□□□ -0.88
LIG1-210ENST00000596332 NPTX1Q15818 432 aa9.58□□□□□ -0.88
LIG1-210ENST00000596332 SLC25A53Q5H9E4 307 aa9.58□□□□□ -0.88
LIG1-210ENST00000596332 NHSL2Q5HYW2 709 aa9.58□□□□□ -0.88
LIG1-210ENST00000596332 WIPI1Q5MNZ9 446 aaPredicted RBP9.58□□□□□ -0.88
LIG1-210ENST00000596332 DCST1Q5T197 706 aa9.58□□□□□ -0.88
LIG1-210ENST00000596332 RNF220Q5VTB9 566 aa9.58□□□□□ -0.88
LIG1-210ENST00000596332 VASNQ6EMK4 673 aa9.58□□□□□ -0.88
LIG1-210ENST00000596332 DHRS4L2Q6PKH6 230 aa9.58□□□□□ -0.88
LIG1-210ENST00000596332 FAM180AQ6UWF9 173 aa9.58□□□□□ -0.88
LIG1-210ENST00000596332 TSEN54Q7Z6J9 526 aaKnown RBP9.58□□□□□ -0.88
LIG1-210ENST00000596332 SLC22A16Q86VW1 577 aa9.58□□□□□ -0.88
LIG1-210ENST00000596332 LACC1Q8IV20 430 aa9.58□□□□□ -0.88
LIG1-210ENST00000596332 MICU2Q8IYU8 434 aa9.58□□□□□ -0.88
LIG1-210ENST00000596332 DEFB107AQ8IZN7 70 aa9.58□□□□□ -0.88
LIG1-210ENST00000596332 B4GALNT2Q8NHY0 566 aa9.58□□□□□ -0.88
LIG1-210ENST00000596332 SH3YL1Q96HL8 342 aaPredicted RBP9.58□□□□□ -0.88
LIG1-210ENST00000596332 PRR14Q9BWN1 585 aa9.58□□□□□ -0.88
LIG1-210ENST00000596332 SDHAF3Q9NRP4 125 aa9.58□□□□□ -0.88
LIG1-210ENST00000596332 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.58□□□□□ -0.88
LIG1-210ENST00000596332 CALML5Q9NZT1 146 aa9.58□□□□□ -0.88
LIG1-210ENST00000596332 PPP4R1LQ9P1A2 415 aa9.58□□□□□ -0.88
LIG1-210ENST00000596332 TNFRSF10DQ9UBN6 386 aa9.58□□□□□ -0.88
LIG1-210ENST00000596332 ZNF443Q9Y2A4 671 aaPredicted RBP9.58□□□□□ -0.88
LIG1-210ENST00000596332 SLC6A5Q9Y345 797 aa9.58□□□□□ -0.88
LIG1-210ENST00000596332 C15orf38-AP3S2A0A0A6YYH1 394 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 A0A1B0GTH9 108 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 ELOVL7A1L3X0 281 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 ANKUB1A6NFN9 424 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 KDM4EB2RXH2 506 aaPredicted RBP9.57□□□□□ -0.88
LIG1-210ENST00000596332 PYCARD-AS1I3L0S3 204 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 FRS3O43559 492 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 HCRTR2O43614 444 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 GMFGO60234 142 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 SUSD5O60279 629 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 LGI1O95970 557 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 CSTAP01040 98 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 OPN1SWP03999 348 aa9.57□□□□□ -0.88
LIG1-210ENST00000596332 UBTFL6P0CB48 400 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms