RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 COX20Q5RI15 118 aa15.64■□□□□ 0.09
SHKBP1-212ENST00000596163 DCST1Q5T197 706 aa15.64■□□□□ 0.09
SHKBP1-212ENST00000596163 LRIF1Q5T3J3 769 aa15.64■□□□□ 0.09
SHKBP1-212ENST00000596163 NSUN5P2Q63ZY6 315 aa15.64■□□□□ 0.09
SHKBP1-212ENST00000596163 ARSKQ6UWY0 536 aa15.64■□□□□ 0.09
SHKBP1-212ENST00000596163 FRRS1Q6ZNA5 592 aa15.64■□□□□ 0.09
SHKBP1-212ENST00000596163 NCCRP1Q6ZVX7 275 aaPredicted RBP15.64■□□□□ 0.09
SHKBP1-212ENST00000596163 RPRMLQ8N4K4 120 aa15.64■□□□□ 0.09
SHKBP1-212ENST00000596163 TRIB1Q96RU8 372 aa15.64■□□□□ 0.09
SHKBP1-212ENST00000596163 LAT2Q9GZY6 243 aa15.64■□□□□ 0.09
SHKBP1-212ENST00000596163 ZNF385DQ9H6B1 395 aa15.64■□□□□ 0.09
SHKBP1-212ENST00000596163 CACYBPQ9HB71 228 aaKnown RBP15.64■□□□□ 0.09
SHKBP1-212ENST00000596163 CHST11Q9NPF2 352 aa15.64■□□□□ 0.09
SHKBP1-212ENST00000596163 SLC52A3Q9NQ40 469 aa15.64■□□□□ 0.09
SHKBP1-212ENST00000596163 MED17Q9NVC6 651 aa15.64■□□□□ 0.09
SHKBP1-212ENST00000596163 CORO2BQ9UQ03 480 aa15.64■□□□□ 0.09
SHKBP1-212ENST00000596163 SLC35A3Q9Y2D2 325 aa15.64■□□□□ 0.09
SHKBP1-212ENST00000596163 CARD8Q9Y2G2 431 aa15.64■□□□□ 0.09
SHKBP1-212ENST00000596163 C7orf72A4D263 438 aa15.63■□□□□ 0.09
SHKBP1-212ENST00000596163 EVPLLA8MZ36 301 aa15.63■□□□□ 0.09
SHKBP1-212ENST00000596163 PRSS44E7EML9 344 aa15.63■□□□□ 0.09
SHKBP1-212ENST00000596163 TNFRSF21O75509 655 aa15.63■□□□□ 0.09
SHKBP1-212ENST00000596163 CSTAP01040 98 aa15.63■□□□□ 0.09
SHKBP1-212ENST00000596163 SNRPB2P08579 225 aaKnown RBP15.63■□□□□ 0.09
SHKBP1-212ENST00000596163 CAPN3P20807 821 aa15.63■□□□□ 0.09
SHKBP1-212ENST00000596163 TIMP3P35625 211 aa15.63■□□□□ 0.09
SHKBP1-212ENST00000596163 CRISP3P54108 245 aa15.63■□□□□ 0.09
SHKBP1-212ENST00000596163 RPS3AP61247 264 aaKnown RBP15.63■□□□□ 0.09
SHKBP1-212ENST00000596163 CHRNEQ04844 493 aa15.63■□□□□ 0.09
SHKBP1-212ENST00000596163 CBFBQ13951 182 aa15.63■□□□□ 0.09
SHKBP1-212ENST00000596163 RGNQ15493 299 aa15.63■□□□□ 0.09
SHKBP1-212ENST00000596163 SYPL1Q16563 259 aa15.63■□□□□ 0.09
SHKBP1-212ENST00000596163 GTDC1Q4AE62 458 aa15.63■□□□□ 0.09
SHKBP1-212ENST00000596163 GTPBP8Q8N3Z3 284 aaPredicted RBP15.63■□□□□ 0.09
SHKBP1-212ENST00000596163 ANKFN1Q8N957 763 aa15.63■□□□□ 0.09
SHKBP1-212ENST00000596163 OR5W2Q8NH69 310 aa15.63■□□□□ 0.09
SHKBP1-212ENST00000596163 LILRB4Q8NHJ6 448 aa15.63■□□□□ 0.09
SHKBP1-212ENST00000596163 ICAM5Q9UMF0 924 aa15.63■□□□□ 0.09
SHKBP1-212ENST00000596163 ZNF337Q9Y3M9 751 aa15.63■□□□□ 0.09
SHKBP1-212ENST00000596163 DNAJC13O75165 2243 aa15.63■□□□□ 0.09
SHKBP1-212ENST00000596163 DIDO1Q9BTC0 2240 aaKnown RBP15.62■□□□□ 0.09
SHKBP1-212ENST00000596163 CYP7B1O75881 506 aa15.62■□□□□ 0.09
SHKBP1-212ENST00000596163 C1QCP02747 245 aa15.62■□□□□ 0.09
SHKBP1-212ENST00000596163 ETFAP13804 333 aa15.62■□□□□ 0.09
SHKBP1-212ENST00000596163 ME2P23368 584 aa15.62■□□□□ 0.09
SHKBP1-212ENST00000596163 ADH6P28332 368 aa15.62■□□□□ 0.09
SHKBP1-212ENST00000596163 HTR1EP28566 365 aa15.62■□□□□ 0.09
SHKBP1-212ENST00000596163 MVDP53602 400 aa15.62■□□□□ 0.09
SHKBP1-212ENST00000596163 CLDN18P56856 261 aa15.62■□□□□ 0.09
SHKBP1-212ENST00000596163 FUT5Q11128 374 aa15.62■□□□□ 0.09
SHKBP1-212ENST00000596163 FGFBP1Q14512 234 aa15.62■□□□□ 0.09
SHKBP1-212ENST00000596163 TMEM44Q2T9K0 475 aa15.62■□□□□ 0.09
SHKBP1-212ENST00000596163 PLPPR5Q32ZL2 321 aa15.62■□□□□ 0.09
SHKBP1-212ENST00000596163 PAGE3Q5JUK9 113 aa15.62■□□□□ 0.09
SHKBP1-212ENST00000596163 CMIPQ8IY22 773 aa15.62■□□□□ 0.09
SHKBP1-212ENST00000596163 PEX5LQ8IYB4 626 aa15.62■□□□□ 0.09
SHKBP1-212ENST00000596163 TMCO5AQ8N6Q1 288 aa15.62■□□□□ 0.09
SHKBP1-212ENST00000596163 OR5M1Q8NGP8 315 aa15.62■□□□□ 0.09
SHKBP1-212ENST00000596163 ARSGQ96EG1 525 aa15.62■□□□□ 0.09
SHKBP1-212ENST00000596163 AURKBQ96GD4 344 aaPredicted RBP15.62■□□□□ 0.09
SHKBP1-212ENST00000596163 ZNF317Q96PQ6 595 aaPredicted RBP15.62■□□□□ 0.09
SHKBP1-212ENST00000596163 UCN2Q96RP3 112 aa15.62■□□□□ 0.09
SHKBP1-212ENST00000596163 TM9SF2Q99805 663 aa15.62■□□□□ 0.09
SHKBP1-212ENST00000596163 TUBA1CQ9BQE3 449 aa15.62■□□□□ 0.09
SHKBP1-212ENST00000596163 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.62■□□□□ 0.09
SHKBP1-212ENST00000596163 GPC6Q9Y625 555 aaPredicted RBP15.62■□□□□ 0.09
SHKBP1-212ENST00000596163 DOPEY2Q9Y3R5 2298 aa15.62■□□□□ 0.09
SHKBP1-212ENST00000596163 USP9YO00507 2555 aaPredicted RBP15.61■□□□□ 0.09
SHKBP1-212ENST00000596163 A0A0G2JPF8 293 aa15.61■□□□□ 0.09
SHKBP1-212ENST00000596163 PRAMEF27A3QJZ7 478 aa15.61■□□□□ 0.09
SHKBP1-212ENST00000596163 HNRNPCL2B2RXH8 293 aa15.61■□□□□ 0.09
SHKBP1-212ENST00000596163 HNRNPCL3B7ZW38 293 aa15.61■□□□□ 0.09
SHKBP1-212ENST00000596163 H3BML4 177 aa15.61■□□□□ 0.09
SHKBP1-212ENST00000596163 HNRNPCL1O60812 293 aaKnown RBP15.61■□□□□ 0.09
SHKBP1-212ENST00000596163 DBIP07108 87 aaKnown RBP15.61■□□□□ 0.09
SHKBP1-212ENST00000596163 TFPTP0C1Z6 253 aa15.61■□□□□ 0.09
SHKBP1-212ENST00000596163 HNRNPCL4P0DMR1 293 aa15.61■□□□□ 0.09
SHKBP1-212ENST00000596163 IL7RP16871 459 aa15.61■□□□□ 0.09
SHKBP1-212ENST00000596163 ADSLP30566 484 aaPredicted RBP15.61■□□□□ 0.09
SHKBP1-212ENST00000596163 CCR4P51679 360 aa15.61■□□□□ 0.09
SHKBP1-212ENST00000596163 RAC1P63000 192 aa15.61■□□□□ 0.09
SHKBP1-212ENST00000596163 KCNJ10P78508 379 aa15.61■□□□□ 0.09
SHKBP1-212ENST00000596163 MAPRE2Q15555 327 aa15.61■□□□□ 0.09
SHKBP1-212ENST00000596163 ZSWIM7Q19AV6 140 aa15.61■□□□□ 0.09
SHKBP1-212ENST00000596163 PDSS1Q5T2R2 415 aa15.61■□□□□ 0.09
SHKBP1-212ENST00000596163 PRAMEF8Q5VWM4 474 aa15.61■□□□□ 0.09
SHKBP1-212ENST00000596163 PRAMEF7Q5VXH5 474 aa15.61■□□□□ 0.09
SHKBP1-212ENST00000596163 CGB2Q6NT52 195 aa15.61■□□□□ 0.09
SHKBP1-212ENST00000596163 CBLN3Q6UW01 205 aa15.61■□□□□ 0.09
SHKBP1-212ENST00000596163 OLIG3Q7RTU3 272 aa15.61■□□□□ 0.09
SHKBP1-212ENST00000596163 CCDC71Q8IV32 467 aaPredicted RBP15.61■□□□□ 0.09
SHKBP1-212ENST00000596163 UBQLNLQ8IYU4 475 aa15.61■□□□□ 0.09
SHKBP1-212ENST00000596163 DPP10Q8N608 796 aa15.61■□□□□ 0.09
SHKBP1-212ENST00000596163 METTL25Q8N6Q8 603 aa15.61■□□□□ 0.09
SHKBP1-212ENST00000596163 GPR119Q8TDV5 335 aa15.61■□□□□ 0.09
SHKBP1-212ENST00000596163 WNT2BQ93097 391 aa15.61■□□□□ 0.09
SHKBP1-212ENST00000596163 SLC38A1Q9H2H9 487 aa15.61■□□□□ 0.09
SHKBP1-212ENST00000596163 KCNJ16Q9NPI9 418 aa15.61■□□□□ 0.09
SHKBP1-212ENST00000596163 PAQR5Q9NXK6 330 aaPredicted RBP15.61■□□□□ 0.09
SHKBP1-212ENST00000596163 KCNE5Q9UJ90 142 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms