RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 FGF11Q92914 225 aa13.5□□□□□ -0.25
SHKBP1-211ENST00000595945 EME1Q96AY2 570 aa13.5□□□□□ -0.25
SHKBP1-211ENST00000595945 TMCO6Q96DC7 493 aa13.5□□□□□ -0.25
SHKBP1-211ENST00000595945 FER1L6-AS2Q96M78 137 aa13.5□□□□□ -0.25
SHKBP1-211ENST00000595945 ZNF559Q9BR84 538 aa13.5□□□□□ -0.25
SHKBP1-211ENST00000595945 PRR14Q9BWN1 585 aa13.5□□□□□ -0.25
SHKBP1-211ENST00000595945 VCX3BQ9H321 246 aa13.5□□□□□ -0.25
SHKBP1-211ENST00000595945 NMNAT1Q9HAN9 279 aaPredicted RBP13.5□□□□□ -0.25
SHKBP1-211ENST00000595945 SH2D2AQ9NP31 389 aa13.5□□□□□ -0.25
SHKBP1-211ENST00000595945 C8orf4Q9NR00 106 aa13.5□□□□□ -0.25
SHKBP1-211ENST00000595945 MAN2C1Q9NTJ4 1040 aa13.5□□□□□ -0.25
SHKBP1-211ENST00000595945 NTNG1Q9Y2I2 539 aa13.5□□□□□ -0.25
SHKBP1-211ENST00000595945 SAMHD1Q9Y3Z3 626 aaKnown RBP13.5□□□□□ -0.25
SHKBP1-211ENST00000595945 A0A1W2PRQ8 180 aa13.49□□□□□ -0.25
SHKBP1-211ENST00000595945 H3BNH8 94 aa13.49□□□□□ -0.25
SHKBP1-211ENST00000595945 PDLIM1O00151 329 aa13.49□□□□□ -0.25
SHKBP1-211ENST00000595945 TNFRSF11BO00300 401 aa13.49□□□□□ -0.25
SHKBP1-211ENST00000595945 AP3D1O14617 1153 aa13.49□□□□□ -0.25
SHKBP1-211ENST00000595945 ZNF264O43296 627 aa13.49□□□□□ -0.25
SHKBP1-211ENST00000595945 EIF4E2O60573 245 aaKnown RBP13.49□□□□□ -0.25
SHKBP1-211ENST00000595945 RASAL1O95294 804 aa13.49□□□□□ -0.25
SHKBP1-211ENST00000595945 THY1P04216 161 aa13.49□□□□□ -0.25
SHKBP1-211ENST00000595945 H1F0P07305 194 aaKnown RBP13.49□□□□□ -0.25
SHKBP1-211ENST00000595945 UBL4AP11441 157 aa13.49□□□□□ -0.25
SHKBP1-211ENST00000595945 HPGDP15428 266 aa13.49□□□□□ -0.25
SHKBP1-211ENST00000595945 CDH12P55289 794 aa13.49□□□□□ -0.25
SHKBP1-211ENST00000595945 SMIM11AP58511 58 aa13.49□□□□□ -0.25
SHKBP1-211ENST00000595945 PIN1Q13526 163 aaPredicted RBP13.49□□□□□ -0.25
SHKBP1-211ENST00000595945 DGCR6Q14129 220 aa13.49□□□□□ -0.25
SHKBP1-211ENST00000595945 MEP1AQ16819 746 aa13.49□□□□□ -0.25
SHKBP1-211ENST00000595945 LRRC36Q1X8D7 754 aa13.49□□□□□ -0.25
SHKBP1-211ENST00000595945 COLEC12Q5KU26 742 aa13.49□□□□□ -0.25
SHKBP1-211ENST00000595945 ENTPD8Q5MY95 495 aa13.49□□□□□ -0.25
SHKBP1-211ENST00000595945 ACER2Q5QJU3 275 aa13.49□□□□□ -0.25
SHKBP1-211ENST00000595945 B3GNTL1Q67FW5 361 aaPredicted RBP13.49□□□□□ -0.25
SHKBP1-211ENST00000595945 ZBTB49Q6ZSB9 765 aa13.49□□□□□ -0.25
SHKBP1-211ENST00000595945 HS3ST5Q8IZT8 346 aa13.49□□□□□ -0.25
SHKBP1-211ENST00000595945 CBR4Q8N4T8 237 aa13.49□□□□□ -0.25
SHKBP1-211ENST00000595945 SIRT6Q8N6T7 355 aa13.49□□□□□ -0.25
SHKBP1-211ENST00000595945 GATSQ8NAP1 163 aa13.49□□□□□ -0.25
SHKBP1-211ENST00000595945 OR10G3Q8NGC4 313 aa13.49□□□□□ -0.25
SHKBP1-211ENST00000595945 SNIP1Q8TAD8 396 aaKnown RBP13.49□□□□□ -0.25
SHKBP1-211ENST00000595945 PHOSPHO1Q8TCT1 267 aa13.49□□□□□ -0.25
SHKBP1-211ENST00000595945 THOC3Q96J01 351 aaKnown RBP13.49□□□□□ -0.25
SHKBP1-211ENST00000595945 SECISBP2Q96T21 854 aaKnown RBP13.49□□□□□ -0.25
SHKBP1-211ENST00000595945 BARD1Q99728 777 aaKnown RBP13.49□□□□□ -0.25
SHKBP1-211ENST00000595945 PSD2Q9BQI7 771 aa13.49□□□□□ -0.25
SHKBP1-211ENST00000595945 LHPPQ9H008 270 aa13.49□□□□□ -0.25
SHKBP1-211ENST00000595945 ANKRD19PQ9H560 264 aa13.49□□□□□ -0.25
SHKBP1-211ENST00000595945 USE1Q9NZ43 259 aa13.49□□□□□ -0.25
SHKBP1-211ENST00000595945 RHCGQ9UBD6 479 aa13.49□□□□□ -0.25
SHKBP1-211ENST00000595945 SSUH2Q9Y2M2 353 aa13.49□□□□□ -0.25
SHKBP1-211ENST00000595945 MAGED1Q9Y5V3 778 aaPredicted RBP13.49□□□□□ -0.25
SHKBP1-211ENST00000595945 ANKRD11Q6UB99 2663 aaPredicted RBP13.49□□□□□ -0.25
SHKBP1-211ENST00000595945 DCHS1Q96JQ0 3298 aa13.49□□□□□ -0.25
SHKBP1-211ENST00000595945 CACNA1GO43497 2377 aa13.49□□□□□ -0.25
SHKBP1-211ENST00000595945 PTPRQQ9UMZ3 2332 aa13.48□□□□□ -0.25
SHKBP1-211ENST00000595945 ZNF891A8MT65 544 aaPredicted RBP13.48□□□□□ -0.25
SHKBP1-211ENST00000595945 G3V2T6 193 aa13.48□□□□□ -0.25
SHKBP1-211ENST00000595945 H0YJX3 145 aa13.48□□□□□ -0.25
SHKBP1-211ENST00000595945 FAAHO00519 579 aa13.48□□□□□ -0.25
SHKBP1-211ENST00000595945 TP53I11O14683 189 aa13.48□□□□□ -0.25
SHKBP1-211ENST00000595945 E2F6O75461 281 aa13.48□□□□□ -0.25
SHKBP1-211ENST00000595945 GADD45GO95257 159 aa13.48□□□□□ -0.25
SHKBP1-211ENST00000595945 ANGPTL1O95841 491 aa13.48□□□□□ -0.25
SHKBP1-211ENST00000595945 UBTFL6P0CB48 400 aaPredicted RBP13.48□□□□□ -0.25
SHKBP1-211ENST00000595945 ELAVL4P26378 380 aaKnown RBP13.48□□□□□ -0.25
SHKBP1-211ENST00000595945 PPP2R2BQ00005 443 aa13.48□□□□□ -0.25
SHKBP1-211ENST00000595945 ZNF117Q03924 483 aa13.48□□□□□ -0.25
SHKBP1-211ENST00000595945 OR1Q1Q15612 314 aa13.48□□□□□ -0.25
SHKBP1-211ENST00000595945 EXOC3L2Q2M3D2 409 aa13.48□□□□□ -0.25
SHKBP1-211ENST00000595945 PLEKHM3Q6ZWE6 761 aa13.48□□□□□ -0.25
SHKBP1-211ENST00000595945 STK32CQ86UX6 486 aa13.48□□□□□ -0.25
SHKBP1-211ENST00000595945 ZDHHC13Q8IUH4 622 aa13.48□□□□□ -0.25
SHKBP1-211ENST00000595945 MISPQ8IVT2 679 aa13.48□□□□□ -0.25
SHKBP1-211ENST00000595945 GPALPP1Q8IXQ4 340 aa13.48□□□□□ -0.25
SHKBP1-211ENST00000595945 LSMEM1Q8N8F7 131 aa13.48□□□□□ -0.25
SHKBP1-211ENST00000595945 TOR1AIP2Q8NFQ8 470 aa13.48□□□□□ -0.25
SHKBP1-211ENST00000595945 KCNE4Q8WWG9 221 aa13.48□□□□□ -0.25
SHKBP1-211ENST00000595945 ASB15Q8WXK1 588 aa13.48□□□□□ -0.25
SHKBP1-211ENST00000595945 FNDC11Q9BVV2 318 aa13.48□□□□□ -0.25
SHKBP1-211ENST00000595945 TBL1XR1Q9BZK7 514 aa13.48□□□□□ -0.25
SHKBP1-211ENST00000595945 TRIM2Q9C040 744 aa13.48□□□□□ -0.25
SHKBP1-211ENST00000595945 DKK4Q9UBT3 224 aa13.48□□□□□ -0.25
SHKBP1-211ENST00000595945 CHCHD2Q9Y6H1 151 aaPredicted RBP13.48□□□□□ -0.25
SHKBP1-211ENST00000595945 U3KQV3 271 aa13.48□□□□□ -0.25
SHKBP1-211ENST00000595945 IGLV3-32A0A0A0MS00 114 aa13.47□□□□□ -0.25
SHKBP1-211ENST00000595945 TRBV4-1A0A0J9YWV2 114 aa13.47□□□□□ -0.25
SHKBP1-211ENST00000595945 TRAPPC13A5PLN9 417 aa13.47□□□□□ -0.25
SHKBP1-211ENST00000595945 ARRDC5A6NEK1 342 aa13.47□□□□□ -0.25
SHKBP1-211ENST00000595945 CPSF4LA6NMK7 179 aaKnown RBP13.47□□□□□ -0.25
SHKBP1-211ENST00000595945 C17orf51A8MQB3 221 aa13.47□□□□□ -0.25
SHKBP1-211ENST00000595945 GTPBP1O00178 669 aaKnown RBP13.47□□□□□ -0.25
SHKBP1-211ENST00000595945 EFSO43281 561 aa13.47□□□□□ -0.25
SHKBP1-211ENST00000595945 NDUFB5O43674 189 aa13.47□□□□□ -0.25
SHKBP1-211ENST00000595945 SCO2O43819 266 aa13.47□□□□□ -0.25
SHKBP1-211ENST00000595945 CYP7B1O75881 506 aa13.47□□□□□ -0.25
SHKBP1-211ENST00000595945 HPRP00739 348 aa13.47□□□□□ -0.25
SHKBP1-211ENST00000595945 THRBP10828 461 aa13.47□□□□□ -0.25
SHKBP1-211ENST00000595945 PLA2G5P39877 138 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms