RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 CCL27Q9Y4X3 112 aa12.21□□□□□ -0.45
SHKBP1-208ENST00000595726 TCF21O43680 179 aa12.2□□□□□ -0.46
SHKBP1-208ENST00000595726 TYROBPO43914 113 aa12.2□□□□□ -0.46
SHKBP1-208ENST00000595726 FESP07332 822 aa12.2□□□□□ -0.46
SHKBP1-208ENST00000595726 CHRNGP07510 517 aa12.2□□□□□ -0.46
SHKBP1-208ENST00000595726 ANXA4P09525 319 aaPredicted RBP12.2□□□□□ -0.46
SHKBP1-208ENST00000595726 CT45A8P0DMV1 189 aa12.2□□□□□ -0.46
SHKBP1-208ENST00000595726 CT45A9P0DMV2 189 aa12.2□□□□□ -0.46
SHKBP1-208ENST00000595726 IL32P24001 234 aa12.2□□□□□ -0.46
SHKBP1-208ENST00000595726 GSTM5P46439 218 aa12.2□□□□□ -0.46
SHKBP1-208ENST00000595726 GZMKP49863 264 aa12.2□□□□□ -0.46
SHKBP1-208ENST00000595726 ZNF763Q0D2J5 394 aa12.2□□□□□ -0.46
SHKBP1-208ENST00000595726 HEPACAMQ14CZ8 416 aa12.2□□□□□ -0.46
SHKBP1-208ENST00000595726 RAB35Q15286 201 aa12.2□□□□□ -0.46
SHKBP1-208ENST00000595726 KRT71Q3SY84 523 aa12.2□□□□□ -0.46
SHKBP1-208ENST00000595726 CT45A2Q5DJT8 189 aa12.2□□□□□ -0.46
SHKBP1-208ENST00000595726 AGAP6Q5VW22 663 aa12.2□□□□□ -0.46
SHKBP1-208ENST00000595726 NPSR1Q6W5P4 371 aa12.2□□□□□ -0.46
SHKBP1-208ENST00000595726 STK32CQ86UX6 486 aa12.2□□□□□ -0.46
SHKBP1-208ENST00000595726 GABRG1Q8N1C3 465 aa12.2□□□□□ -0.46
SHKBP1-208ENST00000595726 OR4N2Q8NGD1 307 aa12.2□□□□□ -0.46
SHKBP1-208ENST00000595726 HSD17B8Q92506 261 aa12.2□□□□□ -0.46
SHKBP1-208ENST00000595726 DTNBP1Q96EV8 351 aa12.2□□□□□ -0.46
SHKBP1-208ENST00000595726 RRAGDQ9NQL2 400 aaPredicted RBP12.2□□□□□ -0.46
SHKBP1-208ENST00000595726 SENP1Q9P0U3 644 aa12.2□□□□□ -0.46
SHKBP1-208ENST00000595726 POLR3HQ9Y535 204 aaPredicted RBP12.2□□□□□ -0.46
SHKBP1-208ENST00000595726 PTGDR2Q9Y5Y4 395 aa12.2□□□□□ -0.46
SHKBP1-208ENST00000595726 ZNF780BQ9Y6R6 833 aa12.2□□□□□ -0.46
SHKBP1-208ENST00000595726 NPIPB8E9PQR5 432 aa12.19□□□□□ -0.46
SHKBP1-208ENST00000595726 AZIN1O14977 448 aa12.19□□□□□ -0.46
SHKBP1-208ENST00000595726 CXCL13O43927 109 aa12.19□□□□□ -0.46
SHKBP1-208ENST00000595726 NPHS1O60500 1241 aa12.19□□□□□ -0.46
SHKBP1-208ENST00000595726 HNF1AP20823 631 aa12.19□□□□□ -0.46
SHKBP1-208ENST00000595726 PRPH2P23942 346 aa12.19□□□□□ -0.46
SHKBP1-208ENST00000595726 IL12BP29460 328 aa12.19□□□□□ -0.46
SHKBP1-208ENST00000595726 ETV4P43268 484 aa12.19□□□□□ -0.46
SHKBP1-208ENST00000595726 CDH11P55287 796 aa12.19□□□□□ -0.46
SHKBP1-208ENST00000595726 EFR3AQ14156 821 aa12.19□□□□□ -0.46
SHKBP1-208ENST00000595726 GGTLC2Q14390 218 aa12.19□□□□□ -0.46
SHKBP1-208ENST00000595726 SFRP5Q5T4F7 317 aa12.19□□□□□ -0.46
SHKBP1-208ENST00000595726 KANK2Q63ZY3 851 aa12.19□□□□□ -0.46
SHKBP1-208ENST00000595726 C11orf71Q6IPW1 123 aa12.19□□□□□ -0.46
SHKBP1-208ENST00000595726 RNF165Q6ZSG1 346 aa12.19□□□□□ -0.46
SHKBP1-208ENST00000595726 ZCCHC23Q6ZST2 131 aa12.19□□□□□ -0.46
SHKBP1-208ENST00000595726 NUFIP2Q7Z417 695 aaKnown RBP12.19□□□□□ -0.46
SHKBP1-208ENST00000595726 RFLNBQ8N5W9 214 aa12.19□□□□□ -0.46
SHKBP1-208ENST00000595726 OR10D3Q8NH80 312 aa12.19□□□□□ -0.46
SHKBP1-208ENST00000595726 FAM76AQ8TAV0 307 aa12.19□□□□□ -0.46
SHKBP1-208ENST00000595726 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.19□□□□□ -0.46
SHKBP1-208ENST00000595726 DUSP19Q8WTR2 217 aa12.19□□□□□ -0.46
SHKBP1-208ENST00000595726 EXOSC8Q96B26 276 aaKnown RBP12.19□□□□□ -0.46
SHKBP1-208ENST00000595726 C3orf49Q96BT1 292 aa12.19□□□□□ -0.46
SHKBP1-208ENST00000595726 PRR14Q9BWN1 585 aa12.19□□□□□ -0.46
SHKBP1-208ENST00000595726 HDHD5Q9BXW7 423 aa12.19□□□□□ -0.46
SHKBP1-208ENST00000595726 FAIMQ9NVQ4 179 aa12.19□□□□□ -0.46
SHKBP1-208ENST00000595726 PRODH2Q9UF12 536 aa12.19□□□□□ -0.46
SHKBP1-208ENST00000595726 FIS1Q9Y3D6 152 aa12.19□□□□□ -0.46
SHKBP1-208ENST00000595726 AP4B1Q9Y6B7 739 aa12.19□□□□□ -0.46
SHKBP1-208ENST00000595726 TRRAPQ9Y4A5 3859 aa12.18□□□□□ -0.46
SHKBP1-208ENST00000595726 TMEM233B4DJY2 109 aa12.18□□□□□ -0.46
SHKBP1-208ENST00000595726 LINC01387J3KSC0 135 aa12.18□□□□□ -0.46
SHKBP1-208ENST00000595726 RGS16O15492 202 aaPredicted RBP12.18□□□□□ -0.46
SHKBP1-208ENST00000595726 TUBBP07437 444 aa12.18□□□□□ -0.46
SHKBP1-208ENST00000595726 DDCP20711 480 aa12.18□□□□□ -0.46
SHKBP1-208ENST00000595726 AGTR1P30556 359 aa12.18□□□□□ -0.46
SHKBP1-208ENST00000595726 EVI2BP34910 448 aa12.18□□□□□ -0.46
SHKBP1-208ENST00000595726 KRT20P35900 424 aa12.18□□□□□ -0.46
SHKBP1-208ENST00000595726 KIAA0040Q15053 153 aa12.18□□□□□ -0.46
SHKBP1-208ENST00000595726 CR1LQ2VPA4 569 aa12.18□□□□□ -0.46
SHKBP1-208ENST00000595726 ZNF628Q5EBL2 1059 aa12.18□□□□□ -0.46
SHKBP1-208ENST00000595726 ARL13AQ5H913 290 aaPredicted RBP12.18□□□□□ -0.46
SHKBP1-208ENST00000595726 FAM71E1Q6IPT2 247 aa12.18□□□□□ -0.46
SHKBP1-208ENST00000595726 NOXRED1Q6NXP6 359 aa12.18□□□□□ -0.46
SHKBP1-208ENST00000595726 CCDC116Q8IYX3 515 aa12.18□□□□□ -0.46
SHKBP1-208ENST00000595726 SAMD14Q8IZD0 417 aaPredicted RBP12.18□□□□□ -0.46
SHKBP1-208ENST00000595726 DEPDC4Q8N2C3 294 aa12.18□□□□□ -0.46
SHKBP1-208ENST00000595726 OR2T11Q8NH01 316 aa12.18□□□□□ -0.46
SHKBP1-208ENST00000595726 CDC26Q8NHZ8 85 aa12.18□□□□□ -0.46
SHKBP1-208ENST00000595726 ZNF675Q8TD23 568 aa12.18□□□□□ -0.46
SHKBP1-208ENST00000595726 PROX1Q92786 737 aa12.18□□□□□ -0.46
SHKBP1-208ENST00000595726 C1GALT1C1Q96EU7 318 aa12.18□□□□□ -0.46
SHKBP1-208ENST00000595726 METTL2AQ96IZ6 378 aaKnown RBP12.18□□□□□ -0.46
SHKBP1-208ENST00000595726 ZIM3Q96PE6 472 aa12.18□□□□□ -0.46
SHKBP1-208ENST00000595726 BTBD9Q96Q07 612 aa12.18□□□□□ -0.46
SHKBP1-208ENST00000595726 NPAS1Q99742 590 aa12.18□□□□□ -0.46
SHKBP1-208ENST00000595726 TUBB1Q9H4B7 451 aa12.18□□□□□ -0.46
SHKBP1-208ENST00000595726 MYNNQ9NPC7 610 aa12.18□□□□□ -0.46
SHKBP1-208ENST00000595726 PFDN4Q9NQP4 134 aa12.18□□□□□ -0.46
SHKBP1-208ENST00000595726 SLC35C2Q9NQQ7 365 aa12.18□□□□□ -0.46
SHKBP1-208ENST00000595726 DNAJC15Q9Y5T4 150 aa12.18□□□□□ -0.46
SHKBP1-208ENST00000595726 E7EQL1 145 aa12.17□□□□□ -0.46
SHKBP1-208ENST00000595726 SLC28A1O00337 649 aa12.17□□□□□ -0.46
SHKBP1-208ENST00000595726 ABCD4O14678 606 aa12.17□□□□□ -0.46
SHKBP1-208ENST00000595726 RGS14O43566 566 aa12.17□□□□□ -0.46
SHKBP1-208ENST00000595726 FADS1O60427 444 aa12.17□□□□□ -0.46
SHKBP1-208ENST00000595726 ADAP00813 363 aa12.17□□□□□ -0.46
SHKBP1-208ENST00000595726 TGFAP01135 160 aa12.17□□□□□ -0.46
SHKBP1-208ENST00000595726 BPGMP07738 259 aa12.17□□□□□ -0.46
SHKBP1-208ENST00000595726 NEFHP12036 1026 aa12.17□□□□□ -0.46
SHKBP1-208ENST00000595726 ARRB2P32121 409 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms