RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 SLC52A3Q9NQ40 469 aa9.92□□□□□ -0.82
SHKBP1-206ENST00000595523 MED17Q9NVC6 651 aa9.92□□□□□ -0.82
SHKBP1-206ENST00000595523 MKLN1Q9UL63 735 aa9.92□□□□□ -0.82
SHKBP1-206ENST00000595523 ICAM5Q9UMF0 924 aa9.92□□□□□ -0.82
SHKBP1-206ENST00000595523 OTOGQ6ZRI0 2925 aa9.92□□□□□ -0.82
SHKBP1-206ENST00000595523 FAM234BA2RU67 622 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 C7orf72A4D263 438 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 HSPB2A8KAH6 182 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 RFXANKO14593 260 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 HNRNPRO43390 633 aaKnown RBP9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 KIAA0513O60268 411 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 BCAS1O75363 584 aaPredicted RBP9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 STX11O75558 287 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 UGT2B17O75795 530 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 TGM6O95932 706 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 AK1P00568 194 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 SNRPB2P08579 225 aaKnown RBP9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 LINGO3P0C6S8 592 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 HPGDP15428 266 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 ZNF17P17021 662 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 POU3F2P20265 443 aaPredicted RBP9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 IL11P20809 199 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 MSX1P28360 303 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 PLAURQ03405 335 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 LRRC74AQ0VAA2 488 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 FOXF2Q12947 444 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 RCAN2Q14206 197 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 GPR68Q15743 365 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 MAPK11Q15759 364 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 ZNF141Q15928 474 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 HSPB2Q16082 182 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 MAPK14Q16539 360 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 PDZK1Q5T2W1 519 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 FRRS1Q6ZNA5 592 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 ZNF621Q6ZSS3 439 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 MSANTD1Q6ZTZ1 278 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 C16orf62Q7Z3J2 963 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 MTERF4Q7Z6M4 381 aaKnown RBP9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 GGNQ86UU5 652 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 UBQLNLQ8IYU4 475 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 GTPBP8Q8N3Z3 284 aaPredicted RBP9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 ZNF527Q8NB42 609 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 B4GALNT2Q8NHY0 566 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 RFWD2Q8NHY2 731 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 PNPT1Q8TCS8 783 aaKnown RBP9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 ZFP90Q8TF47 636 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 XAGE5Q8WWM1 108 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 STON2Q8WXE9 905 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 GTF2H4Q92759 462 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 ROPN1LQ96C74 230 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 ZG16BQ96DA0 208 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 ARSGQ96EG1 525 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 AURKBQ96GD4 344 aaPredicted RBP9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 PIGQQ9BRB3 760 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 TRIM8Q9BZR9 551 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 HOXD1Q9GZZ0 328 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 SAP130Q9H0E3 1048 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 EXD2Q9NVH0 621 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 CARD8Q9Y2G2 431 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 L3MBTL1Q9Y468 752 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 DTNAQ9Y4J8 743 aa9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 MAP1AP78559 2803 aaPredicted RBP9.91□□□□□ -0.82
SHKBP1-206ENST00000595523 A0A087WZY1 265 aa9.9□□□□□ -0.82
SHKBP1-206ENST00000595523 SERINC4A6NH21 518 aa9.9□□□□□ -0.82
SHKBP1-206ENST00000595523 FAM47E-STBD1D6RA91 191 aa9.9□□□□□ -0.82
SHKBP1-206ENST00000595523 H3BML4 177 aa9.9□□□□□ -0.82
SHKBP1-206ENST00000595523 SEC14L5O43304 696 aa9.9□□□□□ -0.82
SHKBP1-206ENST00000595523 EFNA2O43921 213 aa9.9□□□□□ -0.82
SHKBP1-206ENST00000595523 DNAJA2O60884 412 aa9.9□□□□□ -0.82
SHKBP1-206ENST00000595523 AGR2O95994 175 aa9.9□□□□□ -0.82
SHKBP1-206ENST00000595523 IL2RAP01589 272 aa9.9□□□□□ -0.82
SHKBP1-206ENST00000595523 CHRM4P08173 479 aa9.9□□□□□ -0.82
SHKBP1-206ENST00000595523 GUSBP08236 651 aa9.9□□□□□ -0.82
SHKBP1-206ENST00000595523 ZCCHC18P0CG32 403 aa9.9□□□□□ -0.82
SHKBP1-206ENST00000595523 PEPDP12955 493 aa9.9□□□□□ -0.82
SHKBP1-206ENST00000595523 P2RX1P51575 399 aa9.9□□□□□ -0.82
SHKBP1-206ENST00000595523 FOXF1Q12946 379 aa9.9□□□□□ -0.82
SHKBP1-206ENST00000595523 SF3B4Q15427 424 aaKnown RBP eCLIP9.9□□□□□ -0.82
SHKBP1-206ENST00000595523 TOMM34Q15785 309 aaPredicted RBP9.9□□□□□ -0.82
SHKBP1-206ENST00000595523 SYPL1Q16563 259 aa9.9□□□□□ -0.82
SHKBP1-206ENST00000595523 CTU2Q2VPK5 515 aaKnown RBP9.9□□□□□ -0.82
SHKBP1-206ENST00000595523 SLC25A35Q3KQZ1 300 aa9.9□□□□□ -0.82
SHKBP1-206ENST00000595523 SLC2A7Q6PXP3 512 aa9.9□□□□□ -0.82
SHKBP1-206ENST00000595523 BLOC1S3Q6QNY0 202 aa9.9□□□□□ -0.82
SHKBP1-206ENST00000595523 HMGN2P46Q86SG4 172 aa9.9□□□□□ -0.82
SHKBP1-206ENST00000595523 ZNF295-AS1Q8N0V1 137 aa9.9□□□□□ -0.82
SHKBP1-206ENST00000595523 TRIML2Q8N7C3 387 aa9.9□□□□□ -0.82
SHKBP1-206ENST00000595523 ZNF614Q8N883 585 aa9.9□□□□□ -0.82
SHKBP1-206ENST00000595523 ANKFN1Q8N957 763 aa9.9□□□□□ -0.82
SHKBP1-206ENST00000595523 GPR119Q8TDV5 335 aa9.9□□□□□ -0.82
SHKBP1-206ENST00000595523 ZBTB8AQ96BR9 441 aa9.9□□□□□ -0.82
SHKBP1-206ENST00000595523 ZNF845Q96IR2 970 aaPredicted RBP9.9□□□□□ -0.82
SHKBP1-206ENST00000595523 RNF145Q96MT1 663 aa9.9□□□□□ -0.82
SHKBP1-206ENST00000595523 PAIP1Q9H074 479 aaKnown RBP9.9□□□□□ -0.82
SHKBP1-206ENST00000595523 QRSL1Q9H0R6 528 aaKnown RBP9.9□□□□□ -0.82
SHKBP1-206ENST00000595523 SLC38A1Q9H2H9 487 aa9.9□□□□□ -0.82
SHKBP1-206ENST00000595523 ZNF385DQ9H6B1 395 aa9.9□□□□□ -0.82
SHKBP1-206ENST00000595523 RUBCNLQ9H714 662 aa9.9□□□□□ -0.82
SHKBP1-206ENST00000595523 HHATLQ9HCP6 504 aa9.9□□□□□ -0.82
SHKBP1-206ENST00000595523 KCNJ16Q9NPI9 418 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms