RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 BICRALQ6AI39 1079 aa15.34■□□□□ 0.05
LIG1-206ENST00000594067 ZNF425Q6IV72 752 aa15.34■□□□□ 0.05
LIG1-206ENST00000594067 CDC73Q6P1J9 531 aa15.34■□□□□ 0.05
LIG1-206ENST00000594067 ASB18Q6ZVZ8 466 aa15.34■□□□□ 0.05
LIG1-206ENST00000594067 VN1R4Q7Z5H5 301 aa15.34■□□□□ 0.05
LIG1-206ENST00000594067 PFN4Q8NHR9 129 aa15.34■□□□□ 0.05
LIG1-206ENST00000594067 SP7Q8TDD2 431 aaPredicted RBP15.34■□□□□ 0.05
LIG1-206ENST00000594067 ALG8Q9BVK2 526 aa15.34■□□□□ 0.05
LIG1-206ENST00000594067 HCAR1Q9BXC0 346 aa15.34■□□□□ 0.05
LIG1-206ENST00000594067 MTHFD2LQ9H903 347 aaPredicted RBP15.34■□□□□ 0.05
LIG1-206ENST00000594067 LYARQ9NX58 379 aaKnown RBP15.34■□□□□ 0.05
LIG1-206ENST00000594067 ELF5Q9UKW6 265 aaPredicted RBP15.34■□□□□ 0.05
LIG1-206ENST00000594067 NCKAP1Q9Y2A7 1128 aa15.34■□□□□ 0.05
LIG1-206ENST00000594067 A0A1B0GVC2 190 aa15.33■□□□□ 0.05
LIG1-206ENST00000594067 A6NIN4 97 aa15.33■□□□□ 0.05
LIG1-206ENST00000594067 DUXAA6NLW8 204 aa15.33■□□□□ 0.05
LIG1-206ENST00000594067 J3QRE1 110 aa15.33■□□□□ 0.05
LIG1-206ENST00000594067 DNAJB6O75190 326 aa15.33■□□□□ 0.05
LIG1-206ENST00000594067 RGS9O75916 674 aaPredicted RBP15.33■□□□□ 0.05
LIG1-206ENST00000594067 MAT2AP31153 395 aaKnown RBP15.33■□□□□ 0.05
LIG1-206ENST00000594067 GJA4P35212 333 aa15.33■□□□□ 0.05
LIG1-206ENST00000594067 PER3P56645 1201 aa15.33■□□□□ 0.05
LIG1-206ENST00000594067 SIM1P81133 766 aaPredicted RBP15.33■□□□□ 0.05
LIG1-206ENST00000594067 SGCGQ13326 291 aa15.33■□□□□ 0.05
LIG1-206ENST00000594067 KLHL12Q53G59 568 aa15.33■□□□□ 0.05
LIG1-206ENST00000594067 GET4Q7L5D6 327 aaPredicted RBP15.33■□□□□ 0.05
LIG1-206ENST00000594067 ADGRD2Q7Z7M1 963 aa15.33■□□□□ 0.05
LIG1-206ENST00000594067 TIGD4Q8IY51 512 aa15.33■□□□□ 0.05
LIG1-206ENST00000594067 LRRC25Q8N386 305 aaPredicted RBP15.33■□□□□ 0.05
LIG1-206ENST00000594067 ACBD7Q8N6N7 88 aa15.33■□□□□ 0.05
LIG1-206ENST00000594067 ZCCHC10Q8TBK6 192 aa15.33■□□□□ 0.05
LIG1-206ENST00000594067 ARSGQ96EG1 525 aa15.33■□□□□ 0.05
LIG1-206ENST00000594067 MS4A4EQ96PG1 132 aa15.33■□□□□ 0.05
LIG1-206ENST00000594067 PIGUQ9H490 435 aa15.33■□□□□ 0.05
LIG1-206ENST00000594067 NARFLQ9H6Q4 476 aa15.33■□□□□ 0.05
LIG1-206ENST00000594067 CACYBPQ9HB71 228 aaKnown RBP15.33■□□□□ 0.05
LIG1-206ENST00000594067 KCNN3Q9UGI6 736 aa15.33■□□□□ 0.05
LIG1-206ENST00000594067 MDC1Q14676 2089 aaKnown RBP15.33■□□□□ 0.04
LIG1-206ENST00000594067 GSAPA4D1B5 854 aa15.33■□□□□ 0.04
LIG1-206ENST00000594067 UNC119BA6NIH7 251 aa15.33■□□□□ 0.04
LIG1-206ENST00000594067 REM1O75628 298 aa15.33■□□□□ 0.04
LIG1-206ENST00000594067 TBXA2RP21731 343 aa15.33■□□□□ 0.04
LIG1-206ENST00000594067 ZNF136P52737 540 aa15.33■□□□□ 0.04
LIG1-206ENST00000594067 ARFIP1P53367 373 aa15.33■□□□□ 0.04
LIG1-206ENST00000594067 FXYD6P3P58550 94 aa15.33■□□□□ 0.04
LIG1-206ENST00000594067 ID2Q02363 134 aa15.33■□□□□ 0.04
LIG1-206ENST00000594067 TOR2AQ5JU69 321 aa15.33■□□□□ 0.04
LIG1-206ENST00000594067 TANGO2Q6ICL3 276 aa15.33■□□□□ 0.04
LIG1-206ENST00000594067 NIPAL3Q6P499 406 aa15.33■□□□□ 0.04
LIG1-206ENST00000594067 WDR88Q6ZMY6 472 aa15.33■□□□□ 0.04
LIG1-206ENST00000594067 FANK1Q8TC84 345 aa15.33■□□□□ 0.04
LIG1-206ENST00000594067 PRSS27Q9BQR3 290 aa15.33■□□□□ 0.04
LIG1-206ENST00000594067 THAP7Q9BT49 309 aaPredicted RBP15.33■□□□□ 0.04
LIG1-206ENST00000594067 SARGQ9BW04 601 aa15.33■□□□□ 0.04
LIG1-206ENST00000594067 PPIL3Q9H2H8 161 aaKnown RBP15.33■□□□□ 0.04
LIG1-206ENST00000594067 CYSLTR2Q9NS75 346 aa15.33■□□□□ 0.04
LIG1-206ENST00000594067 BABAM2Q9NXR7 383 aa15.33■□□□□ 0.04
LIG1-206ENST00000594067 NPIPA5A0A0B4J1W7 369 aa15.32■□□□□ 0.04
LIG1-206ENST00000594067 SYNDIG1LA6NDD5 238 aa15.32■□□□□ 0.04
LIG1-206ENST00000594067 NPIPA7E9PJI5 369 aa15.32■□□□□ 0.04
LIG1-206ENST00000594067 SLC22A5O76082 557 aa15.32■□□□□ 0.04
LIG1-206ENST00000594067 NPIPA8P0DM63 369 aa15.32■□□□□ 0.04
LIG1-206ENST00000594067 MAKP20794 623 aa15.32■□□□□ 0.04
LIG1-206ENST00000594067 SHC1P29353 583 aa15.32■□□□□ 0.04
LIG1-206ENST00000594067 TSFMP43897 325 aaKnown RBP15.32■□□□□ 0.04
LIG1-206ENST00000594067 ANGPT1Q15389 498 aa15.32■□□□□ 0.04
LIG1-206ENST00000594067 MAPK14Q16539 360 aa15.32■□□□□ 0.04
LIG1-206ENST00000594067 FAM27D1Q5T7N8 215 aa15.32■□□□□ 0.04
LIG1-206ENST00000594067 BCL2L15Q5TBC7 163 aa15.32■□□□□ 0.04
LIG1-206ENST00000594067 TEX261Q6UWH6 196 aa15.32■□□□□ 0.04
LIG1-206ENST00000594067 IDO2Q6ZQW0 420 aa15.32■□□□□ 0.04
LIG1-206ENST00000594067 SPERTQ8NA61 448 aa15.32■□□□□ 0.04
LIG1-206ENST00000594067 ACOT12Q8WYK0 555 aa15.32■□□□□ 0.04
LIG1-206ENST00000594067 MARVELD3Q96A59 401 aa15.32■□□□□ 0.04
LIG1-206ENST00000594067 PHF21AQ96BD5 680 aa15.32■□□□□ 0.04
LIG1-206ENST00000594067 TIMP4Q99727 224 aa15.32■□□□□ 0.04
LIG1-206ENST00000594067 C1QTNF2Q9BXJ5 285 aa15.32■□□□□ 0.04
LIG1-206ENST00000594067 RSPH9Q9H1X1 276 aaPredicted RBP15.32■□□□□ 0.04
LIG1-206ENST00000594067 ZFP64Q9NPA5 681 aa15.32■□□□□ 0.04
LIG1-206ENST00000594067 C20orf141Q9NUB4 165 aa15.32■□□□□ 0.04
LIG1-206ENST00000594067 EIF3KQ9UBQ5 218 aaKnown RBP15.32■□□□□ 0.04
LIG1-206ENST00000594067 SATB2Q9UPW6 733 aa15.32■□□□□ 0.04
LIG1-206ENST00000594067 U3KQ87 197 aa15.32■□□□□ 0.04
LIG1-206ENST00000594067 LINC01553A4QN01 128 aa15.32■□□□□ 0.04
LIG1-206ENST00000594067 RNGTTO60942 597 aaKnown RBP15.32■□□□□ 0.04
LIG1-206ENST00000594067 BTCP35070 178 aa15.32■□□□□ 0.04
LIG1-206ENST00000594067 SLC16A1P53985 500 aa15.32■□□□□ 0.04
LIG1-206ENST00000594067 ARL9Q6T311 187 aa15.32■□□□□ 0.04
LIG1-206ENST00000594067 MEPCEQ7L2J0 689 aaKnown RBP15.32■□□□□ 0.04
LIG1-206ENST00000594067 BMPERQ8N8U9 685 aa15.32■□□□□ 0.04
LIG1-206ENST00000594067 OR10H4Q8NGA5 316 aa15.32■□□□□ 0.04
LIG1-206ENST00000594067 OR11H7Q8NGC8 314 aa15.32■□□□□ 0.04
LIG1-206ENST00000594067 OR5M3Q8NGP4 307 aa15.32■□□□□ 0.04
LIG1-206ENST00000594067 ZNF431Q8TF32 576 aaPredicted RBP15.32■□□□□ 0.04
LIG1-206ENST00000594067 MED28Q9H204 178 aa15.32■□□□□ 0.04
LIG1-206ENST00000594067 ABCG5Q9H222 651 aa15.32■□□□□ 0.04
LIG1-206ENST00000594067 MGAT4AQ9UM21 535 aa15.32■□□□□ 0.04
LIG1-206ENST00000594067 SLC17A4Q9Y2C5 497 aa15.32■□□□□ 0.04
LIG1-206ENST00000594067 TRBV23OR9-2A0A075B6M9 112 aa15.31■□□□□ 0.04
LIG1-206ENST00000594067 A0A1W2PQU0 124 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms