RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 SERPINB7O75635 380 aa17.97■□□□□ 0.47
LSM4-203ENST00000593829 SULT1C4O75897 302 aa17.97■□□□□ 0.47
LSM4-203ENST00000593829 PRSS23O95084 383 aa17.97■□□□□ 0.47
LSM4-203ENST00000593829 CPSF4O95639 269 aaKnown RBP17.97■□□□□ 0.47
LSM4-203ENST00000593829 OCM2P0CE71 109 aa17.97■□□□□ 0.47
LSM4-203ENST00000593829 OCMP0CE72 109 aaPredicted RBP17.97■□□□□ 0.47
LSM4-203ENST00000593829 ZNF24P17028 368 aa17.97■□□□□ 0.47
LSM4-203ENST00000593829 DNASE1L1P49184 302 aa17.97■□□□□ 0.47
LSM4-203ENST00000593829 POLR2JP52435 117 aaKnown RBP17.97■□□□□ 0.47
LSM4-203ENST00000593829 CAPRIN1Q14444 709 aaKnown RBP17.97■□□□□ 0.47
LSM4-203ENST00000593829 NANOGP8Q6NSW7 305 aa17.97■□□□□ 0.47
LSM4-203ENST00000593829 OR5AK3PQ8NH89 298 aa17.97■□□□□ 0.47
LSM4-203ENST00000593829 HGDQ93099 445 aa17.97■□□□□ 0.47
LSM4-203ENST00000593829 ADOQ96SZ5 270 aa17.97■□□□□ 0.47
LSM4-203ENST00000593829 KCTD14Q9BQ13 255 aaPredicted RBP17.97■□□□□ 0.47
LSM4-203ENST00000593829 BDH2Q9BUT1 245 aa17.97■□□□□ 0.47
LSM4-203ENST00000593829 IL1RL2Q9HB29 575 aa17.97■□□□□ 0.47
LSM4-203ENST00000593829 MRTO4Q9UKD2 239 aaKnown RBP17.97■□□□□ 0.47
LSM4-203ENST00000593829 TSPAN2O60636 221 aa17.96■□□□□ 0.47
LSM4-203ENST00000593829 NKX2-2O95096 273 aa17.96■□□□□ 0.47
LSM4-203ENST00000593829 ALOX5P09917 674 aa17.96■□□□□ 0.47
LSM4-203ENST00000593829 EDN3P14138 238 aa17.96■□□□□ 0.47
LSM4-203ENST00000593829 CD247P20963 164 aa17.96■□□□□ 0.47
LSM4-203ENST00000593829 RFC3P40938 356 aa17.96■□□□□ 0.47
LSM4-203ENST00000593829 BCAP31P51572 246 aa17.96■□□□□ 0.47
LSM4-203ENST00000593829 BMXP51813 675 aa17.96■□□□□ 0.47
LSM4-203ENST00000593829 PNLIPRP2P54317 469 aa17.96■□□□□ 0.47
LSM4-203ENST00000593829 LIPEQ05469 1076 aa17.96■□□□□ 0.47
LSM4-203ENST00000593829 EFR3AQ14156 821 aa17.96■□□□□ 0.47
LSM4-203ENST00000593829 LASP1Q14847 261 aaKnown RBP17.96■□□□□ 0.47
LSM4-203ENST00000593829 DECR1Q16698 335 aa17.96■□□□□ 0.47
LSM4-203ENST00000593829 RBM48Q5RL73 367 aaKnown RBP17.96■□□□□ 0.47
LSM4-203ENST00000593829 LINC00299Q6ZSB3 139 aa17.96■□□□□ 0.47
LSM4-203ENST00000593829 CENPSQ8N2Z9 138 aa17.96■□□□□ 0.47
LSM4-203ENST00000593829 SLC16A11Q8NCK7 471 aa17.96■□□□□ 0.47
LSM4-203ENST00000593829 TMCO6Q96DC7 493 aa17.96■□□□□ 0.47
LSM4-203ENST00000593829 NRBF2Q96F24 287 aa17.96■□□□□ 0.47
LSM4-203ENST00000593829 YIPF4Q9BSR8 244 aa17.96■□□□□ 0.47
LSM4-203ENST00000593829 DOHHQ9BU89 302 aa17.96■□□□□ 0.47
LSM4-203ENST00000593829 ITGB1BP2Q9UKP3 347 aa17.96■□□□□ 0.47
LSM4-203ENST00000593829 FAM234BA2RU67 622 aa17.96■□□□□ 0.47
LSM4-203ENST00000593829 PINLYPA6NC86 204 aa17.96■□□□□ 0.47
LSM4-203ENST00000593829 BOLA2-SMG1P6H3BVE0 249 aa17.96■□□□□ 0.47
LSM4-203ENST00000593829 PYCARD-AS1I3L0S3 204 aa17.96■□□□□ 0.47
LSM4-203ENST00000593829 TPST1O60507 370 aa17.96■□□□□ 0.47
LSM4-203ENST00000593829 HPRP00739 348 aa17.96■□□□□ 0.47
LSM4-203ENST00000593829 ACP2P11117 423 aa17.96■□□□□ 0.47
LSM4-203ENST00000593829 MST1P26927 711 aa17.96■□□□□ 0.47
LSM4-203ENST00000593829 ZFP36L2P47974 494 aaKnown RBP17.96■□□□□ 0.47
LSM4-203ENST00000593829 PLGLB1Q02325 96 aa17.96■□□□□ 0.47
LSM4-203ENST00000593829 NFYCQ13952 458 aa17.96■□□□□ 0.47
LSM4-203ENST00000593829 RNFT1Q5M7Z0 435 aa17.96■□□□□ 0.47
LSM4-203ENST00000593829 EXOSC6Q5RKV6 272 aaKnown RBP17.96■□□□□ 0.47
LSM4-203ENST00000593829 DESI1Q6ICB0 168 aa17.96■□□□□ 0.47
LSM4-203ENST00000593829 GOT1L1Q8NHS2 421 aaPredicted RBP17.96■□□□□ 0.47
LSM4-203ENST00000593829 FBXO30Q8TB52 745 aa17.96■□□□□ 0.47
LSM4-203ENST00000593829 EFHD2Q96C19 240 aaPredicted RBP17.96■□□□□ 0.47
LSM4-203ENST00000593829 ANGPTL4Q9BY76 406 aa17.96■□□□□ 0.47
LSM4-203ENST00000593829 ACTRT3Q9BYD9 372 aa17.96■□□□□ 0.47
LSM4-203ENST00000593829 PROK2Q9HC23 129 aa17.96■□□□□ 0.47
LSM4-203ENST00000593829 GPATCH2Q9NW75 528 aa17.96■□□□□ 0.47
LSM4-203ENST00000593829 LEF1Q9UJU2 399 aaPredicted RBP17.96■□□□□ 0.47
LSM4-203ENST00000593829 SHANK1Q9Y566 2161 aa17.95■□□□□ 0.46
LSM4-203ENST00000593829 KCNH1O95259 989 aa17.95■□□□□ 0.46
LSM4-203ENST00000593829 UQCRC2P22695 453 aa17.95■□□□□ 0.46
LSM4-203ENST00000593829 CASP3P42574 277 aa17.95■□□□□ 0.46
LSM4-203ENST00000593829 PSMD4P55036 377 aaKnown RBP17.95■□□□□ 0.46
LSM4-203ENST00000593829 KCNK10P57789 538 aa17.95■□□□□ 0.46
LSM4-203ENST00000593829 BICRALQ6AI39 1079 aa17.95■□□□□ 0.46
LSM4-203ENST00000593829 TMEM81Q6P7N7 255 aa17.95■□□□□ 0.46
LSM4-203ENST00000593829 C6orf120Q7Z4R8 191 aa17.95■□□□□ 0.46
LSM4-203ENST00000593829 OFCC1Q8IZS5 231 aa17.95■□□□□ 0.46
LSM4-203ENST00000593829 ST6GALNAC3Q8NDV1 305 aa17.95■□□□□ 0.46
LSM4-203ENST00000593829 PIK3R3Q92569 461 aa17.95■□□□□ 0.46
LSM4-203ENST00000593829 PANX1Q96RD7 426 aa17.95■□□□□ 0.46
LSM4-203ENST00000593829 STACQ99469 402 aa17.95■□□□□ 0.46
LSM4-203ENST00000593829 METTL7AQ9H8H3 244 aa17.95■□□□□ 0.46
LSM4-203ENST00000593829 GIN1Q9NXP7 522 aa17.95■□□□□ 0.46
LSM4-203ENST00000593829 ERGIC3Q9Y282 383 aa17.95■□□□□ 0.46
LSM4-203ENST00000593829 GXYLT2A0PJZ3 443 aa17.94■□□□□ 0.46
LSM4-203ENST00000593829 SOX30O94993 753 aa17.94■□□□□ 0.46
LSM4-203ENST00000593829 SNX4O95219 450 aa17.94■□□□□ 0.46
LSM4-203ENST00000593829 IL33O95760 270 aa17.94■□□□□ 0.46
LSM4-203ENST00000593829 ALDH3A2P51648 485 aa17.94■□□□□ 0.46
LSM4-203ENST00000593829 TDGF1P3P51864 188 aa17.94■□□□□ 0.46
LSM4-203ENST00000593829 FOXO1Q12778 655 aa17.94■□□□□ 0.46
LSM4-203ENST00000593829 DUSP5Q16690 384 aa17.94■□□□□ 0.46
LSM4-203ENST00000593829 CDC73Q6P1J9 531 aa17.94■□□□□ 0.46
LSM4-203ENST00000593829 C16orf87Q6PH81 154 aa17.94■□□□□ 0.46
LSM4-203ENST00000593829 MSANTD1Q6ZTZ1 278 aa17.94■□□□□ 0.46
LSM4-203ENST00000593829 SIAH3Q8IW03 269 aa17.94■□□□□ 0.46
LSM4-203ENST00000593829 MAGEE2Q8TD90 523 aaPredicted RBP17.94■□□□□ 0.46
LSM4-203ENST00000593829 NODALQ96S42 347 aa17.94■□□□□ 0.46
LSM4-203ENST00000593829 TTTY12Q9BZ98 90 aa17.94■□□□□ 0.46
LSM4-203ENST00000593829 NAA50Q9GZZ1 169 aaKnown RBP17.94■□□□□ 0.46
LSM4-203ENST00000593829 RMND5AQ9H871 391 aa17.94■□□□□ 0.46
LSM4-203ENST00000593829 DUSP22Q9NRW4 184 aa17.94■□□□□ 0.46
LSM4-203ENST00000593829 MAGEL2Q9UJ55 1249 aa17.94■□□□□ 0.46
LSM4-203ENST00000593829 BOKQ9UMX3 212 aaPredicted RBP17.94■□□□□ 0.46
LSM4-203ENST00000593829 ACOT7O00154 380 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms