RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 PHOSPHO1Q8TCT1 267 aa18.29■□□□□ 0.52
TRIM47-207ENST00000593089 ROBO4Q8WZ75 1007 aa18.29■□□□□ 0.52
TRIM47-207ENST00000593089 OSTF1Q92882 214 aa18.29■□□□□ 0.52
TRIM47-207ENST00000593089 ARSGQ96EG1 525 aa18.29■□□□□ 0.52
TRIM47-207ENST00000593089 APOPT1Q96IL0 206 aa18.29■□□□□ 0.52
TRIM47-207ENST00000593089 KLHL15Q96M94 604 aa18.29■□□□□ 0.52
TRIM47-207ENST00000593089 BDH2Q9BUT1 245 aa18.29■□□□□ 0.52
TRIM47-207ENST00000593089 MECRQ9BV79 373 aa18.29■□□□□ 0.52
TRIM47-207ENST00000593089 ACTR6Q9GZN1 396 aa18.29■□□□□ 0.52
TRIM47-207ENST00000593089 PIGUQ9H490 435 aa18.29■□□□□ 0.52
TRIM47-207ENST00000593089 ATP6V1HQ9UI12 483 aa18.29■□□□□ 0.52
TRIM47-207ENST00000593089 TRAF6Q9Y4K3 522 aa18.29■□□□□ 0.52
TRIM47-207ENST00000593089 NPIPA5A0A0B4J1W7 369 aa18.28■□□□□ 0.52
TRIM47-207ENST00000593089 TMEM114B3SHH9 223 aa18.28■□□□□ 0.52
TRIM47-207ENST00000593089 NPIPA7E9PJI5 369 aa18.28■□□□□ 0.52
TRIM47-207ENST00000593089 PEX11AO75192 247 aa18.28■□□□□ 0.52
TRIM47-207ENST00000593089 HSPA4LO95757 839 aa18.28■□□□□ 0.52
TRIM47-207ENST00000593089 NUDT14O95848 222 aa18.28■□□□□ 0.52
TRIM47-207ENST00000593089 PLAUP00749 431 aa18.28■□□□□ 0.52
TRIM47-207ENST00000593089 TUBBP07437 444 aa18.28■□□□□ 0.52
TRIM47-207ENST00000593089 FGF4P08620 206 aa18.28■□□□□ 0.52
TRIM47-207ENST00000593089 LINGO3P0C6S8 592 aa18.28■□□□□ 0.52
TRIM47-207ENST00000593089 NPIPA8P0DM63 369 aa18.28■□□□□ 0.52
TRIM47-207ENST00000593089 DDX5P17844 614 aaKnown RBP18.28■□□□□ 0.52
TRIM47-207ENST00000593089 ATP6V1C1P21283 382 aa18.28■□□□□ 0.52
TRIM47-207ENST00000593089 SHC1P29353 583 aa18.28■□□□□ 0.52
TRIM47-207ENST00000593089 AGTR1P30556 359 aa18.28■□□□□ 0.52
TRIM47-207ENST00000593089 CARD18P57730 90 aa18.28■□□□□ 0.52
TRIM47-207ENST00000593089 FOXF1Q12946 379 aa18.28■□□□□ 0.52
TRIM47-207ENST00000593089 MLC1Q15049 377 aa18.28■□□□□ 0.52
TRIM47-207ENST00000593089 UGT3A2Q3SY77 523 aa18.28■□□□□ 0.52
TRIM47-207ENST00000593089 ARL13AQ5H913 290 aaPredicted RBP18.28■□□□□ 0.52
TRIM47-207ENST00000593089 ALKBH2Q6NS38 261 aa18.28■□□□□ 0.52
TRIM47-207ENST00000593089 PLPPR2Q96GM1 343 aa18.28■□□□□ 0.52
TRIM47-207ENST00000593089 STACQ99469 402 aa18.28■□□□□ 0.52
TRIM47-207ENST00000593089 EML4Q9HC35 981 aaKnown RBP18.28■□□□□ 0.52
TRIM47-207ENST00000593089 DUSP22Q9NRW4 184 aa18.28■□□□□ 0.52
TRIM47-207ENST00000593089 OIP5O43482 229 aa18.27■□□□□ 0.52
TRIM47-207ENST00000593089 NPHS1O60500 1241 aa18.27■□□□□ 0.52
TRIM47-207ENST00000593089 LAMP1P11279 417 aa18.27■□□□□ 0.52
TRIM47-207ENST00000593089 MAPK1P28482 360 aa18.27■□□□□ 0.52
TRIM47-207ENST00000593089 RPL3P39023 403 aaKnown RBP18.27■□□□□ 0.52
TRIM47-207ENST00000593089 EIF1P41567 113 aaKnown RBP18.27■□□□□ 0.52
TRIM47-207ENST00000593089 PTH2RP49190 550 aa18.27■□□□□ 0.52
TRIM47-207ENST00000593089 TP53BP2Q13625 1128 aa18.27■□□□□ 0.52
TRIM47-207ENST00000593089 GTF2IRD2BQ6EKJ0 949 aa18.27■□□□□ 0.52
TRIM47-207ENST00000593089 CDC73Q6P1J9 531 aa18.27■□□□□ 0.52
TRIM47-207ENST00000593089 ZCCHC23Q6ZST2 131 aa18.27■□□□□ 0.52
TRIM47-207ENST00000593089 GTF2IRD2Q86UP8 949 aa18.27■□□□□ 0.52
TRIM47-207ENST00000593089 OR2W6PQ8NHA6 318 aa18.27■□□□□ 0.52
TRIM47-207ENST00000593089 REXO5Q96IC2 774 aaKnown RBP18.27■□□□□ 0.52
TRIM47-207ENST00000593089 PPP3R2Q96LZ3 170 aa18.27■□□□□ 0.52
TRIM47-207ENST00000593089 C1orf50Q9BV19 199 aa18.27■□□□□ 0.52
TRIM47-207ENST00000593089 GSX2Q9BZM3 304 aa18.27■□□□□ 0.52
TRIM47-207ENST00000593089 MKS1Q9NXB0 559 aa18.27■□□□□ 0.52
TRIM47-207ENST00000593089 CCT3P49368 545 aaKnown RBP18.26■□□□□ 0.51
TRIM47-207ENST00000593089 NR1H2P55055 460 aa18.26■□□□□ 0.51
TRIM47-207ENST00000593089 PTGR1Q14914 329 aa18.26■□□□□ 0.51
TRIM47-207ENST00000593089 ZNF239Q16600 458 aaKnown RBP18.26■□□□□ 0.51
TRIM47-207ENST00000593089 SPDYE7PQ495Y7 208 aa18.26■□□□□ 0.51
TRIM47-207ENST00000593089 CBLN3Q6UW01 205 aa18.26■□□□□ 0.51
TRIM47-207ENST00000593089 MTERF4Q7Z6M4 381 aaKnown RBP18.26■□□□□ 0.51
TRIM47-207ENST00000593089 HOMEZQ8IX15 550 aa18.26■□□□□ 0.51
TRIM47-207ENST00000593089 BANPQ8N9N5 519 aa18.26■□□□□ 0.51
TRIM47-207ENST00000593089 ZNF527Q8NB42 609 aa18.26■□□□□ 0.51
TRIM47-207ENST00000593089 FBXO27Q8NI29 283 aa18.26■□□□□ 0.51
TRIM47-207ENST00000593089 ADAMTS15Q8TE58 950 aa18.26■□□□□ 0.51
TRIM47-207ENST00000593089 ABHD3Q8WU67 409 aa18.26■□□□□ 0.51
TRIM47-207ENST00000593089 NUDT8Q8WV74 236 aa18.26■□□□□ 0.51
TRIM47-207ENST00000593089 TMEM171Q8WVE6 324 aa18.26■□□□□ 0.51
TRIM47-207ENST00000593089 OR5P2Q8WZ92 322 aa18.26■□□□□ 0.51
TRIM47-207ENST00000593089 ACTRT3Q9BYD9 372 aa18.26■□□□□ 0.51
TRIM47-207ENST00000593089 SRXN1Q9BYN0 137 aa18.26■□□□□ 0.51
TRIM47-207ENST00000593089 CXorf36Q9H7Y0 433 aa18.26■□□□□ 0.51
TRIM47-207ENST00000593089 SLC17A7Q9P2U7 560 aa18.26■□□□□ 0.51
TRIM47-207ENST00000593089 CARD8Q9Y2G2 431 aa18.26■□□□□ 0.51
TRIM47-207ENST00000593089 GPR52Q9Y2T5 361 aa18.26■□□□□ 0.51
TRIM47-207ENST00000593089 KCNE3Q9Y6H6 103 aa18.26■□□□□ 0.51
TRIM47-207ENST00000593089 NSD1Q96L73 2696 aaPredicted RBP18.26■□□□□ 0.51
TRIM47-207ENST00000593089 EFNA2O43921 213 aa18.25■□□□□ 0.51
TRIM47-207ENST00000593089 SPAG7O75391 227 aa18.25■□□□□ 0.51
TRIM47-207ENST00000593089 SLU7O95391 586 aaKnown RBP18.25■□□□□ 0.51
TRIM47-207ENST00000593089 NTN1O95631 604 aa18.25■□□□□ 0.51
TRIM47-207ENST00000593089 C6orf47O95873 294 aa18.25■□□□□ 0.51
TRIM47-207ENST00000593089 PABPC4LP0CB38 370 aaKnown RBP18.25■□□□□ 0.51
TRIM47-207ENST00000593089 PSMB1P20618 241 aaKnown RBP18.25■□□□□ 0.51
TRIM47-207ENST00000593089 ELK4P28324 431 aa18.25■□□□□ 0.51
TRIM47-207ENST00000593089 P2RX1P51575 399 aa18.25■□□□□ 0.51
TRIM47-207ENST00000593089 NDUFAF6Q330K2 333 aa18.25■□□□□ 0.51
TRIM47-207ENST00000593089 ATP6AP1LQ52LC2 224 aa18.25■□□□□ 0.51
TRIM47-207ENST00000593089 XKR7Q5GH72 579 aa18.25■□□□□ 0.51
TRIM47-207ENST00000593089 TMEM201Q5SNT2 666 aa18.25■□□□□ 0.51
TRIM47-207ENST00000593089 DCST2Q5T1A1 773 aa18.25■□□□□ 0.51
TRIM47-207ENST00000593089 ZNF614Q8N883 585 aa18.25■□□□□ 0.51
TRIM47-207ENST00000593089 ATP6V1C2Q8NEY4 427 aa18.25■□□□□ 0.51
TRIM47-207ENST00000593089 OR56A1Q8NGH5 318 aa18.25■□□□□ 0.51
TRIM47-207ENST00000593089 RNF128Q8TEB7 428 aa18.25■□□□□ 0.51
TRIM47-207ENST00000593089 CPNE4Q96A23 557 aaPredicted RBP18.25■□□□□ 0.51
TRIM47-207ENST00000593089 HOXD1Q9GZZ0 328 aa18.25■□□□□ 0.51
TRIM47-207ENST00000593089 TIGARQ9NQ88 270 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms