RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 NUDT17P0C025 328 aa16.87■□□□□ 0.29
CCDC43-205ENST00000592333 NID1P14543 1247 aa16.87■□□□□ 0.29
CCDC43-205ENST00000592333 ATP6V1C1P21283 382 aa16.87■□□□□ 0.29
CCDC43-205ENST00000592333 ALDH3A1P30838 453 aa16.87■□□□□ 0.29
CCDC43-205ENST00000592333 CARD18P57730 90 aa16.87■□□□□ 0.29
CCDC43-205ENST00000592333 ATP6AP1LQ52LC2 224 aa16.87■□□□□ 0.29
CCDC43-205ENST00000592333 KLHL26Q53HC5 615 aa16.87■□□□□ 0.29
CCDC43-205ENST00000592333 HBMQ6B0K9 141 aa16.87■□□□□ 0.29
CCDC43-205ENST00000592333 BHLHB9Q6PI77 547 aa16.87■□□□□ 0.29
CCDC43-205ENST00000592333 CLEC9AQ6UXN8 241 aa16.87■□□□□ 0.29
CCDC43-205ENST00000592333 ZNF550Q7Z398 422 aa16.87■□□□□ 0.29
CCDC43-205ENST00000592333 GALNT10Q86SR1 603 aa16.87■□□□□ 0.29
CCDC43-205ENST00000592333 LILRA2Q8N149 483 aa16.87■□□□□ 0.29
CCDC43-205ENST00000592333 SFXN5Q8TD22 340 aa16.87■□□□□ 0.29
CCDC43-205ENST00000592333 OSTF1Q92882 214 aa16.87■□□□□ 0.29
CCDC43-205ENST00000592333 COQ8BQ96D53 544 aa16.87■□□□□ 0.29
CCDC43-205ENST00000592333 REXO5Q96IC2 774 aaKnown RBP16.87■□□□□ 0.29
CCDC43-205ENST00000592333 COX4I2Q96KJ9 171 aa16.87■□□□□ 0.29
CCDC43-205ENST00000592333 KLHL15Q96M94 604 aa16.87■□□□□ 0.29
CCDC43-205ENST00000592333 TACO1Q9BSH4 297 aaKnown RBP16.87■□□□□ 0.29
CCDC43-205ENST00000592333 UBTD1Q9HAC8 227 aa16.87■□□□□ 0.29
CCDC43-205ENST00000592333 GPC6Q9Y625 555 aaPredicted RBP16.87■□□□□ 0.29
CCDC43-205ENST00000592333 A0A0J9YW62 118 aa16.86■□□□□ 0.29
CCDC43-205ENST00000592333 PIP5K1BO14986 540 aa16.86■□□□□ 0.29
CCDC43-205ENST00000592333 GMFGO60234 142 aa16.86■□□□□ 0.29
CCDC43-205ENST00000592333 CHRNGP07510 517 aa16.86■□□□□ 0.29
CCDC43-205ENST00000592333 PRPS1L1P21108 318 aa16.86■□□□□ 0.29
CCDC43-205ENST00000592333 CCT3P49368 545 aaKnown RBP16.86■□□□□ 0.29
CCDC43-205ENST00000592333 P2RX1P51575 399 aa16.86■□□□□ 0.29
CCDC43-205ENST00000592333 C21orf58P58505 322 aa16.86■□□□□ 0.29
CCDC43-205ENST00000592333 C22orf34Q6ZV56 151 aa16.86■□□□□ 0.29
CCDC43-205ENST00000592333 PLEKHM3Q6ZWE6 761 aa16.86■□□□□ 0.29
CCDC43-205ENST00000592333 ZAR1Q86SH2 424 aa16.86■□□□□ 0.29
CCDC43-205ENST00000592333 CLHC1Q8NHS4 586 aa16.86■□□□□ 0.29
CCDC43-205ENST00000592333 POC1BQ8TC44 478 aa16.86■□□□□ 0.29
CCDC43-205ENST00000592333 ADAMTS15Q8TE58 950 aa16.86■□□□□ 0.29
CCDC43-205ENST00000592333 IGFBPL1Q8WX77 278 aa16.86■□□□□ 0.29
CCDC43-205ENST00000592333 JADE3Q92613 823 aa16.86■□□□□ 0.29
CCDC43-205ENST00000592333 ZIM3Q96PE6 472 aa16.86■□□□□ 0.29
CCDC43-205ENST00000592333 ROPN1BQ9BZX4 212 aaPredicted RBP16.86■□□□□ 0.29
CCDC43-205ENST00000592333 ZNF395Q9H8N7 513 aaPredicted RBP16.86■□□□□ 0.29
CCDC43-205ENST00000592333 L2HGDHQ9H9P8 463 aa16.86■□□□□ 0.29
CCDC43-205ENST00000592333 ROPN1Q9HAT0 212 aaPredicted RBP16.86■□□□□ 0.29
CCDC43-205ENST00000592333 FBXO34Q9NWN3 711 aa16.86■□□□□ 0.29
CCDC43-205ENST00000592333 LGALS13Q9UHV8 139 aa16.86■□□□□ 0.29
CCDC43-205ENST00000592333 ICAM5Q9UMF0 924 aa16.86■□□□□ 0.29
CCDC43-205ENST00000592333 FAF1Q9UNN5 650 aaPredicted RBP16.86■□□□□ 0.29
CCDC43-205ENST00000592333 SNX8Q9Y5X2 465 aa16.86■□□□□ 0.29
CCDC43-205ENST00000592333 RAI1Q7Z5J4 1906 aaPredicted RBP16.86■□□□□ 0.29
CCDC43-205ENST00000592333 ARID1AO14497 2285 aa16.85■□□□□ 0.29
CCDC43-205ENST00000592333 TNFSF11O14788 317 aa16.85■□□□□ 0.29
CCDC43-205ENST00000592333 THBDP07204 575 aa16.85■□□□□ 0.29
CCDC43-205ENST00000592333 AGTR1P30556 359 aa16.85■□□□□ 0.29
CCDC43-205ENST00000592333 ATP12AP54707 1039 aa16.85■□□□□ 0.29
CCDC43-205ENST00000592333 MAD2L1Q13257 205 aaPredicted RBP16.85■□□□□ 0.29
CCDC43-205ENST00000592333 LASP1Q14847 261 aaKnown RBP16.85■□□□□ 0.29
CCDC43-205ENST00000592333 CD226Q15762 336 aa16.85■□□□□ 0.29
CCDC43-205ENST00000592333 EXOC3L2Q2M3D2 409 aa16.85■□□□□ 0.29
CCDC43-205ENST00000592333 SMU1Q2TAY7 513 aa16.85■□□□□ 0.29
CCDC43-205ENST00000592333 PPP4R4Q6NUP7 873 aa16.85■□□□□ 0.29
CCDC43-205ENST00000592333 SLC43A2Q8N370 569 aa16.85■□□□□ 0.29
CCDC43-205ENST00000592333 GATSQ8NAP1 163 aa16.85■□□□□ 0.29
CCDC43-205ENST00000592333 TOR1AIP2Q8NFQ8 470 aa16.85■□□□□ 0.29
CCDC43-205ENST00000592333 STEAP2Q8NFT2 490 aa16.85■□□□□ 0.29
CCDC43-205ENST00000592333 OR7A2PQ8NGA2 310 aa16.85■□□□□ 0.29
CCDC43-205ENST00000592333 RNF128Q8TEB7 428 aa16.85■□□□□ 0.29
CCDC43-205ENST00000592333 OIT3Q8WWZ8 545 aa16.85■□□□□ 0.29
CCDC43-205ENST00000592333 ARSGQ96EG1 525 aa16.85■□□□□ 0.29
CCDC43-205ENST00000592333 ZC3HAV1LQ96H79 300 aaKnown RBP16.85■□□□□ 0.29
CCDC43-205ENST00000592333 MRGPRX4Q96LA9 322 aa16.85■□□□□ 0.29
CCDC43-205ENST00000592333 HS3ST6Q96QI5 342 aa16.85■□□□□ 0.29
CCDC43-205ENST00000592333 TMEM204Q9BSN7 226 aa16.85■□□□□ 0.29
CCDC43-205ENST00000592333 BHLHE41Q9C0J9 482 aaPredicted RBP16.85■□□□□ 0.29
CCDC43-205ENST00000592333 GPATCH2Q9NW75 528 aa16.85■□□□□ 0.29
CCDC43-205ENST00000592333 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.84■□□□□ 0.29
CCDC43-205ENST00000592333 DUXAA6NLW8 204 aa16.84■□□□□ 0.29
CCDC43-205ENST00000592333 ETV2O00321 342 aaPredicted RBP16.84■□□□□ 0.29
CCDC43-205ENST00000592333 EIF4E2O60573 245 aaKnown RBP16.84■□□□□ 0.29
CCDC43-205ENST00000592333 PEX11AO75192 247 aa16.84■□□□□ 0.29
CCDC43-205ENST00000592333 LAMP1P11279 417 aa16.84■□□□□ 0.29
CCDC43-205ENST00000592333 ZNF117Q03924 483 aa16.84■□□□□ 0.29
CCDC43-205ENST00000592333 TP53BP2Q13625 1128 aa16.84■□□□□ 0.29
CCDC43-205ENST00000592333 ZNF239Q16600 458 aaKnown RBP16.84■□□□□ 0.29
CCDC43-205ENST00000592333 SLC25A53Q5H9E4 307 aa16.84■□□□□ 0.29
CCDC43-205ENST00000592333 TMEM201Q5SNT2 666 aa16.84■□□□□ 0.29
CCDC43-205ENST00000592333 C6orf136Q5SQH8 315 aa16.84■□□□□ 0.29
CCDC43-205ENST00000592333 CCNJQ5T5M9 372 aa16.84■□□□□ 0.29
CCDC43-205ENST00000592333 SSX8Q7RTT4 187 aa16.84■□□□□ 0.29
CCDC43-205ENST00000592333 YTHDF3Q7Z739 585 aaKnown RBP16.84■□□□□ 0.29
CCDC43-205ENST00000592333 RIMKLAQ8IXN7 391 aa16.84■□□□□ 0.29
CCDC43-205ENST00000592333 ZNF611Q8N823 705 aa16.84■□□□□ 0.29
CCDC43-205ENST00000592333 PPP1R14CQ8TAE6 165 aa16.84■□□□□ 0.29
CCDC43-205ENST00000592333 FBXO30Q8TB52 745 aa16.84■□□□□ 0.29
CCDC43-205ENST00000592333 PHOSPHO1Q8TCT1 267 aa16.84■□□□□ 0.29
CCDC43-205ENST00000592333 CDS1Q92903 461 aa16.84■□□□□ 0.29
CCDC43-205ENST00000592333 ARL8AQ96BM9 186 aa16.84■□□□□ 0.29
CCDC43-205ENST00000592333 SH3YL1Q96HL8 342 aaPredicted RBP16.84■□□□□ 0.29
CCDC43-205ENST00000592333 NPAS1Q99742 590 aa16.84■□□□□ 0.29
CCDC43-205ENST00000592333 CXorf56Q9H5V9 222 aa16.84■□□□□ 0.29
CCDC43-205ENST00000592333 TLDC2A0PJX2 215 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms