RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 ZNF527Q8NB42 609 aa16.05■□□□□ 0.16
PRKCSH-211ENST00000590098 OR7A2PQ8NGA2 310 aa16.05■□□□□ 0.16
PRKCSH-211ENST00000590098 PHOSPHO1Q8TCT1 267 aa16.05■□□□□ 0.16
PRKCSH-211ENST00000590098 AGR3Q8TD06 166 aa16.05■□□□□ 0.16
PRKCSH-211ENST00000590098 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.05■□□□□ 0.16
PRKCSH-211ENST00000590098 OSTF1Q92882 214 aa16.05■□□□□ 0.16
PRKCSH-211ENST00000590098 CDS1Q92903 461 aa16.05■□□□□ 0.16
PRKCSH-211ENST00000590098 PERPQ96FX8 193 aa16.05■□□□□ 0.16
PRKCSH-211ENST00000590098 REXO5Q96IC2 774 aaKnown RBP16.05■□□□□ 0.16
PRKCSH-211ENST00000590098 KLHL15Q96M94 604 aa16.05■□□□□ 0.16
PRKCSH-211ENST00000590098 HOXD1Q9GZZ0 328 aa16.05■□□□□ 0.16
PRKCSH-211ENST00000590098 PIGUQ9H490 435 aa16.05■□□□□ 0.16
PRKCSH-211ENST00000590098 TIGARQ9NQ88 270 aa16.05■□□□□ 0.16
PRKCSH-211ENST00000590098 SIRT3Q9NTG7 399 aaPredicted RBP16.05■□□□□ 0.16
PRKCSH-211ENST00000590098 ATAD3AQ9NVI7 634 aa16.05■□□□□ 0.16
PRKCSH-211ENST00000590098 MKS1Q9NXB0 559 aa16.05■□□□□ 0.16
PRKCSH-211ENST00000590098 GIN1Q9NXP7 522 aa16.05■□□□□ 0.16
PRKCSH-211ENST00000590098 FAF1Q9UNN5 650 aaPredicted RBP16.05■□□□□ 0.16
PRKCSH-211ENST00000590098 ZANQ9Y493 2812 aa16.05■□□□□ 0.16
PRKCSH-211ENST00000590098 RAI1Q7Z5J4 1906 aaPredicted RBP16.04■□□□□ 0.16
PRKCSH-211ENST00000590098 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.04■□□□□ 0.16
PRKCSH-211ENST00000590098 PEX11AO75192 247 aa16.04■□□□□ 0.16
PRKCSH-211ENST00000590098 NUDT14O95848 222 aa16.04■□□□□ 0.16
PRKCSH-211ENST00000590098 THBDP07204 575 aa16.04■□□□□ 0.16
PRKCSH-211ENST00000590098 KRT16P08779 473 aa16.04■□□□□ 0.16
PRKCSH-211ENST00000590098 LAMP1P11279 417 aa16.04■□□□□ 0.16
PRKCSH-211ENST00000590098 CCT3P49368 545 aaKnown RBP16.04■□□□□ 0.16
PRKCSH-211ENST00000590098 CD226Q15762 336 aa16.04■□□□□ 0.16
PRKCSH-211ENST00000590098 SPDYE7PQ495Y7 208 aa16.04■□□□□ 0.16
PRKCSH-211ENST00000590098 ATP6AP1LQ52LC2 224 aa16.04■□□□□ 0.16
PRKCSH-211ENST00000590098 EXOSC6Q5RKV6 272 aaKnown RBP16.04■□□□□ 0.16
PRKCSH-211ENST00000590098 RIBC1Q8N443 379 aaPredicted RBP16.04■□□□□ 0.16
PRKCSH-211ENST00000590098 NATD1Q8N6N6 113 aa16.04■□□□□ 0.16
PRKCSH-211ENST00000590098 BANPQ8N9N5 519 aa16.04■□□□□ 0.16
PRKCSH-211ENST00000590098 POC1BQ8TC44 478 aa16.04■□□□□ 0.16
PRKCSH-211ENST00000590098 ADAMTS15Q8TE58 950 aa16.04■□□□□ 0.16
PRKCSH-211ENST00000590098 OR5P2Q8WZ92 322 aa16.04■□□□□ 0.16
PRKCSH-211ENST00000590098 Q96MF0 132 aa16.04■□□□□ 0.16
PRKCSH-211ENST00000590098 PRPF18Q99633 342 aaKnown RBP16.04■□□□□ 0.16
PRKCSH-211ENST00000590098 BDH2Q9BUT1 245 aa16.04■□□□□ 0.16
PRKCSH-211ENST00000590098 MECRQ9BV79 373 aa16.04■□□□□ 0.16
PRKCSH-211ENST00000590098 ACTRT3Q9BYD9 372 aa16.04■□□□□ 0.16
PRKCSH-211ENST00000590098 C12orf49Q9H741 205 aa16.04■□□□□ 0.16
PRKCSH-211ENST00000590098 GIMAP2Q9UG22 337 aa16.04■□□□□ 0.16
PRKCSH-211ENST00000590098 GJE1A6NN92 205 aa16.03■□□□□ 0.16
PRKCSH-211ENST00000590098 H7C1Q1 480 aa16.03■□□□□ 0.16
PRKCSH-211ENST00000590098 GTPBP1O00178 669 aaKnown RBP16.03■□□□□ 0.16
PRKCSH-211ENST00000590098 LYPLA1O75608 230 aaPredicted RBP16.03■□□□□ 0.16
PRKCSH-211ENST00000590098 SOX30O94993 753 aa16.03■□□□□ 0.16
PRKCSH-211ENST00000590098 HEXAP06865 529 aa16.03■□□□□ 0.16
PRKCSH-211ENST00000590098 LINGO3P0C6S8 592 aa16.03■□□□□ 0.16
PRKCSH-211ENST00000590098 LOXP28300 417 aaPredicted RBP16.03■□□□□ 0.16
PRKCSH-211ENST00000590098 SFTPDP35247 375 aa16.03■□□□□ 0.16
PRKCSH-211ENST00000590098 NR1H2P55055 460 aa16.03■□□□□ 0.16
PRKCSH-211ENST00000590098 TP53BP2Q13625 1128 aa16.03■□□□□ 0.16
PRKCSH-211ENST00000590098 LSM12Q3MHD2 195 aaKnown RBP16.03■□□□□ 0.16
PRKCSH-211ENST00000590098 CDC73Q6P1J9 531 aa16.03■□□□□ 0.16
PRKCSH-211ENST00000590098 OR56A1Q8NGH5 318 aa16.03■□□□□ 0.16
PRKCSH-211ENST00000590098 OR2W6PQ8NHA6 318 aa16.03■□□□□ 0.16
PRKCSH-211ENST00000590098 ROBO4Q8WZ75 1007 aa16.03■□□□□ 0.16
PRKCSH-211ENST00000590098 TRIM44Q96DX7 344 aaPredicted RBP16.03■□□□□ 0.16
PRKCSH-211ENST00000590098 ACTR6Q9GZN1 396 aa16.03■□□□□ 0.16
PRKCSH-211ENST00000590098 GPR52Q9Y2T5 361 aa16.03■□□□□ 0.16
PRKCSH-211ENST00000590098 KLF4O43474 513 aa16.02■□□□□ 0.16
PRKCSH-211ENST00000590098 SLU7O95391 586 aaKnown RBP16.02■□□□□ 0.16
PRKCSH-211ENST00000590098 ELK4P28324 431 aa16.02■□□□□ 0.16
PRKCSH-211ENST00000590098 ADH6P28332 368 aa16.02■□□□□ 0.16
PRKCSH-211ENST00000590098 AGTR1P30556 359 aa16.02■□□□□ 0.16
PRKCSH-211ENST00000590098 ZNF117Q03924 483 aa16.02■□□□□ 0.16
PRKCSH-211ENST00000590098 FOXF1Q12946 379 aa16.02■□□□□ 0.16
PRKCSH-211ENST00000590098 PTGR1Q14914 329 aa16.02■□□□□ 0.16
PRKCSH-211ENST00000590098 RNPS1Q15287 305 aaKnown RBP16.02■□□□□ 0.16
PRKCSH-211ENST00000590098 KLHL26Q53HC5 615 aa16.02■□□□□ 0.16
PRKCSH-211ENST00000590098 TMEM201Q5SNT2 666 aa16.02■□□□□ 0.16
PRKCSH-211ENST00000590098 DCST2Q5T1A1 773 aa16.02■□□□□ 0.16
PRKCSH-211ENST00000590098 ZNF704Q6ZNC4 412 aaPredicted RBP16.02■□□□□ 0.16
PRKCSH-211ENST00000590098 WFDC8Q8IUA0 241 aa16.02■□□□□ 0.16
PRKCSH-211ENST00000590098 FNDC5Q8NAU1 212 aa16.02■□□□□ 0.16
PRKCSH-211ENST00000590098 TMEM171Q8WVE6 324 aa16.02■□□□□ 0.16
PRKCSH-211ENST00000590098 CPNE4Q96A23 557 aaPredicted RBP16.02■□□□□ 0.16
PRKCSH-211ENST00000590098 COX4I2Q96KJ9 171 aa16.02■□□□□ 0.16
PRKCSH-211ENST00000590098 KLHDC3Q9BQ90 382 aa16.02■□□□□ 0.16
PRKCSH-211ENST00000590098 C1orf50Q9BV19 199 aa16.02■□□□□ 0.16
PRKCSH-211ENST00000590098 OR10A4Q9H209 315 aa16.02■□□□□ 0.16
PRKCSH-211ENST00000590098 SLC17A7Q9P2U7 560 aa16.02■□□□□ 0.16
PRKCSH-211ENST00000590098 CARD8Q9Y2G2 431 aa16.02■□□□□ 0.16
PRKCSH-211ENST00000590098 JMJD1CQ15652 2540 aa16.02■□□□□ 0.15
PRKCSH-211ENST00000590098 PRR14LQ5THK1 2151 aa16.02■□□□□ 0.15
PRKCSH-211ENST00000590098 ZNF195O14628 629 aa16.01■□□□□ 0.15
PRKCSH-211ENST00000590098 CFLARO15519 480 aa16.01■□□□□ 0.15
PRKCSH-211ENST00000590098 SPAG7O75391 227 aa16.01■□□□□ 0.15
PRKCSH-211ENST00000590098 LY6G6DO95868 133 aa16.01■□□□□ 0.15
PRKCSH-211ENST00000590098 SERPINB5P36952 375 aa16.01■□□□□ 0.15
PRKCSH-211ENST00000590098 P2RX1P51575 399 aa16.01■□□□□ 0.15
PRKCSH-211ENST00000590098 SUMO3P55854 103 aaPredicted RBP16.01■□□□□ 0.15
PRKCSH-211ENST00000590098 IFFO1Q0D2I5 559 aa16.01■□□□□ 0.15
PRKCSH-211ENST00000590098 ZNF239Q16600 458 aaKnown RBP16.01■□□□□ 0.15
PRKCSH-211ENST00000590098 XKR7Q5GH72 579 aa16.01■□□□□ 0.15
PRKCSH-211ENST00000590098 C6orf136Q5SQH8 315 aa16.01■□□□□ 0.15
PRKCSH-211ENST00000590098 IL23RQ5VWK5 629 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms