RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 SLC22A4Q9H015 551 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 FN3KQ9H479 309 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 RERGLQ9H628 205 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 POT1Q9NUX5 634 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 SLC7A7Q9UM01 511 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 HS3ST3A1Q9Y663 406 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 TRBV23OR9-2A0A075B6M9 112 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 KIR2DS5A0A0G2JLQ3 304 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 A0A0G2JNG1 304 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 A0A1W2PQL4 384 aaPredicted RBP6.88□□□□□ -1.31
ZNF540-206ENST00000589117 KIR2DS3K7RE56 304 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 SCAMP1O15126 338 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 FRS3O43559 492 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 COQ9O75208 318 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 GPR75O95800 540 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 JMJD7P0C870 316 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 NID1P14543 1247 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 NT5EP21589 574 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 PTBP1P26599 531 aaKnown RBP eCLIP6.88□□□□□ -1.31
ZNF540-206ENST00000589117 BMP8BP34820 402 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 GPR4P46093 362 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 OR2B6P58173 313 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 PPP2CBP62714 309 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 PPP2CAP67775 309 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 SIM1P81133 766 aaPredicted RBP6.88□□□□□ -1.31
ZNF540-206ENST00000589117 BDH1Q02338 343 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 HNRNPA0Q13151 305 aaKnown RBP6.88□□□□□ -1.31
ZNF540-206ENST00000589117 KIR2DS5Q14953 304 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 EOGTQ5NDL2 527 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 AADACL4Q5VUY2 407 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 SLC30A6Q6NXT4 461 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 METAP1DQ6UB28 335 aaPredicted RBP6.88□□□□□ -1.31
ZNF540-206ENST00000589117 QSOX2Q6ZRP7 698 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 NCCRP1Q6ZVX7 275 aaPredicted RBP6.88□□□□□ -1.31
ZNF540-206ENST00000589117 BMP8AQ7Z5Y6 402 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 RAB43Q86YS6 212 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 MCATQ8IVS2 390 aaKnown RBP6.88□□□□□ -1.31
ZNF540-206ENST00000589117 SLC43A2Q8N370 569 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 SCAIQ8N9R8 606 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 GALNT11Q8NCW6 608 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 JPH3Q8WXH2 748 aaPredicted RBP6.88□□□□□ -1.31
ZNF540-206ENST00000589117 OTULINQ96BN8 352 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 ABHD8Q96I13 439 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 MSLNLQ96KJ4 702 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 CCDC3Q9BQI4 270 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 GSDMCQ9BYG8 508 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 BARHL1Q9BZE3 327 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 TMEM168Q9H0V1 697 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 TMEM27Q9HBJ8 222 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 C14orf119Q9NWQ9 140 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 ASB6Q9NWX5 421 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 POLHQ9Y253 713 aa6.88□□□□□ -1.31
ZNF540-206ENST00000589117 EXOGQ9Y2C4 368 aaKnown RBP6.88□□□□□ -1.31
ZNF540-206ENST00000589117 GPR55Q9Y2T6 319 aaPredicted RBP6.88□□□□□ -1.31
ZNF540-206ENST00000589117 CAB39Q9Y376 341 aaPredicted RBP6.88□□□□□ -1.31
ZNF540-206ENST00000589117 C2orf16Q68DN1 1984 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 CCDC163A0A0D9SF12 145 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 CCDC182A6NF36 153 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 TMEM221A6NGB7 291 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 UNC119BA6NIH7 251 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 WWP2O00308 870 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 CCNKO75909 580 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 CH25HO95992 272 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 RABIFP47224 123 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 SMCPP49901 116 aaPredicted RBP6.87□□□□□ -1.31
ZNF540-206ENST00000589117 EEF1A1P68104 462 aaKnown RBP6.87□□□□□ -1.31
ZNF540-206ENST00000589117 MAP4K2Q12851 820 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 TRAM1Q15629 374 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 RAB30Q15771 203 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 DUSP5Q16690 384 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 DCST2Q5T1A1 773 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 OR2G6Q5TZ20 316 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 AGAP6Q5VW22 663 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 CD200R1LQ6Q8B3 271 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 FAM111BQ6SJ93 734 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 PAQR6Q6TCH4 344 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 CXXC5Q7LFL8 322 aaKnown RBP6.87□□□□□ -1.31
ZNF540-206ENST00000589117 LHFPL3Q86UP9 236 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 NKAIN4Q8IVV8 208 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 LAX1Q8IWV1 398 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 ACBD7Q8N6N7 88 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 C19orf18Q8NEA5 215 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 OR4C6Q8NH72 309 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 BRIX1Q8TDN6 353 aaKnown RBP6.87□□□□□ -1.31
ZNF540-206ENST00000589117 TMEM239Q8WW34 195 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 FGF11Q92914 225 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 MRGPRX1Q96LB2 322 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 BMFQ96LC9 184 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 AGAP4Q96P64 663 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 FCRL4Q96PJ5 515 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 SECISBP2Q96T21 854 aaKnown RBP6.87□□□□□ -1.31
ZNF540-206ENST00000589117 ZNF559Q9BR84 538 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 JAM3Q9BX67 310 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 WNT10AQ9GZT5 417 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 ZNF350Q9GZX5 532 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 SLC6A17Q9H1V8 727 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 C8orf33Q9H7E9 229 aaPredicted RBP6.87□□□□□ -1.31
ZNF540-206ENST00000589117 ADAP2Q9NPF8 381 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 INPP5EQ9NRR6 644 aa6.87□□□□□ -1.31
ZNF540-206ENST00000589117 BAIAP2Q9UQB8 552 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms