RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 RGS14O43566 566 aa12.45□□□□□ -0.42
VMP1-209ENST00000588915 GLRA3O75311 464 aa12.45□□□□□ -0.42
VMP1-209ENST00000588915 PRKD3O94806 890 aa12.45□□□□□ -0.42
VMP1-209ENST00000588915 IFNA2P01563 188 aa12.45□□□□□ -0.42
VMP1-209ENST00000588915 TP53P04637 393 aaPredicted RBP12.45□□□□□ -0.42
VMP1-209ENST00000588915 YES1P07947 543 aa12.45□□□□□ -0.42
VMP1-209ENST00000588915 SOD3P08294 240 aa12.45□□□□□ -0.42
VMP1-209ENST00000588915 ALOX5P09917 674 aa12.45□□□□□ -0.42
VMP1-209ENST00000588915 ACP2P11117 423 aa12.45□□□□□ -0.42
VMP1-209ENST00000588915 IL32P24001 234 aa12.45□□□□□ -0.42
VMP1-209ENST00000588915 PRIM2P49643 509 aa12.45□□□□□ -0.42
VMP1-209ENST00000588915 PRKAG1P54619 331 aa12.45□□□□□ -0.42
VMP1-209ENST00000588915 ITGADQ13349 1161 aa12.45□□□□□ -0.42
VMP1-209ENST00000588915 PDE7AQ13946 482 aa12.45□□□□□ -0.42
VMP1-209ENST00000588915 MLC1Q15049 377 aa12.45□□□□□ -0.42
VMP1-209ENST00000588915 TAB1Q15750 504 aa12.45□□□□□ -0.42
VMP1-209ENST00000588915 DUSP5Q16690 384 aa12.45□□□□□ -0.42
VMP1-209ENST00000588915 CCDC153Q494R4 210 aa12.45□□□□□ -0.42
VMP1-209ENST00000588915 CFAP157Q5JU67 520 aa12.45□□□□□ -0.42
VMP1-209ENST00000588915 PODNL1Q6PEZ8 512 aa12.45□□□□□ -0.42
VMP1-209ENST00000588915 FIGNL1Q6PIW4 674 aa12.45□□□□□ -0.42
VMP1-209ENST00000588915 TFAP2EQ6VUC0 442 aa12.45□□□□□ -0.42
VMP1-209ENST00000588915 DNM1P46Q6ZS02 220 aa12.45□□□□□ -0.42
VMP1-209ENST00000588915 TDRPQ86YL5 185 aa12.45□□□□□ -0.42
VMP1-209ENST00000588915 COX18Q8N8Q8 333 aa12.45□□□□□ -0.42
VMP1-209ENST00000588915 NOA1Q8NC60 698 aaKnown RBP12.45□□□□□ -0.42
VMP1-209ENST00000588915 RAB3IL1Q8TBN0 382 aa12.45□□□□□ -0.42
VMP1-209ENST00000588915 PIWIL2Q8TC59 973 aaKnown RBP12.45□□□□□ -0.42
VMP1-209ENST00000588915 PPCDCQ96CD2 204 aa12.45□□□□□ -0.42
VMP1-209ENST00000588915 MTERF3Q96E29 417 aa12.45□□□□□ -0.42
VMP1-209ENST00000588915 STACQ99469 402 aa12.45□□□□□ -0.42
VMP1-209ENST00000588915 NPAS1Q99742 590 aa12.45□□□□□ -0.42
VMP1-209ENST00000588915 BTBD2Q9BX70 525 aa12.45□□□□□ -0.42
VMP1-209ENST00000588915 DUSP22Q9NRW4 184 aa12.45□□□□□ -0.42
VMP1-209ENST00000588915 SH3BP4Q9P0V3 963 aa12.45□□□□□ -0.42
VMP1-209ENST00000588915 KLHL13Q9P2N7 655 aa12.45□□□□□ -0.42
VMP1-209ENST00000588915 PSMC3IPQ9P2W1 217 aaPredicted RBP12.45□□□□□ -0.42
VMP1-209ENST00000588915 TMED5Q9Y3A6 229 aa12.45□□□□□ -0.42
VMP1-209ENST00000588915 GPC6Q9Y625 555 aaPredicted RBP12.45□□□□□ -0.42
VMP1-209ENST00000588915 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.45□□□□□ -0.42
VMP1-209ENST00000588915 SONP18583 2426 aaKnown RBP12.45□□□□□ -0.42
VMP1-209ENST00000588915 ABCA1O95477 2261 aa12.44□□□□□ -0.42
VMP1-209ENST00000588915 GOLGA8RI6L899 631 aa12.44□□□□□ -0.42
VMP1-209ENST00000588915 OPN1LWP04000 364 aa12.44□□□□□ -0.42
VMP1-209ENST00000588915 NEFHP12036 1026 aa12.44□□□□□ -0.42
VMP1-209ENST00000588915 CCT5P48643 541 aa12.44□□□□□ -0.42
VMP1-209ENST00000588915 SUMO3P55854 103 aaPredicted RBP12.44□□□□□ -0.42
VMP1-209ENST00000588915 POU6F2P78424 691 aaPredicted RBP12.44□□□□□ -0.42
VMP1-209ENST00000588915 ZNF672Q499Z4 452 aaPredicted RBP12.44□□□□□ -0.42
VMP1-209ENST00000588915 Q6ZSR9 355 aa12.44□□□□□ -0.42
VMP1-209ENST00000588915 FCRLAQ7L513 359 aa12.44□□□□□ -0.42
VMP1-209ENST00000588915 R3HCC1LQ7Z5L2 792 aaKnown RBP12.44□□□□□ -0.42
VMP1-209ENST00000588915 ZAR1Q86SH2 424 aa12.44□□□□□ -0.42
VMP1-209ENST00000588915 HIPK1Q86Z02 1210 aa12.44□□□□□ -0.42
VMP1-209ENST00000588915 C17orf53Q8N3J3 647 aaPredicted RBP12.44□□□□□ -0.42
VMP1-209ENST00000588915 ZNF527Q8NB42 609 aa12.44□□□□□ -0.42
VMP1-209ENST00000588915 MZB1Q8WU39 189 aa12.44□□□□□ -0.42
VMP1-209ENST00000588915 ROBO4Q8WZ75 1007 aa12.44□□□□□ -0.42
VMP1-209ENST00000588915 KISS1RQ969F8 398 aaPredicted RBP12.44□□□□□ -0.42
VMP1-209ENST00000588915 CIDECQ96AQ7 238 aaPredicted RBP12.44□□□□□ -0.42
VMP1-209ENST00000588915 SH3YL1Q96HL8 342 aaPredicted RBP12.44□□□□□ -0.42
VMP1-209ENST00000588915 POTEKPQ9BYX7 375 aa12.44□□□□□ -0.42
VMP1-209ENST00000588915 SLCO5A1Q9H2Y9 848 aa12.44□□□□□ -0.42
VMP1-209ENST00000588915 TMEM185BQ9H7F4 350 aa12.44□□□□□ -0.42
VMP1-209ENST00000588915 BARX1Q9HBU1 254 aaPredicted RBP12.44□□□□□ -0.42
VMP1-209ENST00000588915 EMCNQ9ULC0 261 aa12.44□□□□□ -0.42
VMP1-209ENST00000588915 STAB1Q9NY15 2570 aa12.43□□□□□ -0.42
VMP1-209ENST00000588915 A0A1W2PP18 115 aa12.43□□□□□ -0.42
VMP1-209ENST00000588915 ZNF195O14628 629 aa12.43□□□□□ -0.42
VMP1-209ENST00000588915 CLOCKO15516 846 aa12.43□□□□□ -0.42
VMP1-209ENST00000588915 CD5LO43866 347 aa12.43□□□□□ -0.42
VMP1-209ENST00000588915 SFTPDP35247 375 aa12.43□□□□□ -0.42
VMP1-209ENST00000588915 ASMTP46597 345 aa12.43□□□□□ -0.42
VMP1-209ENST00000588915 P2RX1P51575 399 aa12.43□□□□□ -0.42
VMP1-209ENST00000588915 CD226Q15762 336 aa12.43□□□□□ -0.42
VMP1-209ENST00000588915 ZNF385BQ569K4 471 aa12.43□□□□□ -0.42
VMP1-209ENST00000588915 LRIG3Q6UXM1 1119 aa12.43□□□□□ -0.42
VMP1-209ENST00000588915 Q6ZT83 130 aa12.43□□□□□ -0.42
VMP1-209ENST00000588915 NUFIP2Q7Z417 695 aaKnown RBP12.43□□□□□ -0.42
VMP1-209ENST00000588915 TUSC5Q8IXB3 177 aa12.43□□□□□ -0.42
VMP1-209ENST00000588915 GATSQ8NAP1 163 aa12.43□□□□□ -0.42
VMP1-209ENST00000588915 PHOSPHO1Q8TCT1 267 aa12.43□□□□□ -0.42
VMP1-209ENST00000588915 ABHD3Q8WU67 409 aa12.43□□□□□ -0.42
VMP1-209ENST00000588915 MRGPRX4Q96LA9 322 aa12.43□□□□□ -0.42
VMP1-209ENST00000588915 REPIN1Q9BWE0 567 aaKnown RBP12.43□□□□□ -0.42
VMP1-209ENST00000588915 PIGUQ9H490 435 aa12.43□□□□□ -0.42
VMP1-209ENST00000588915 BCO1Q9HAY6 547 aa12.43□□□□□ -0.42
VMP1-209ENST00000588915 FAIMQ9NVQ4 179 aa12.43□□□□□ -0.42
VMP1-209ENST00000588915 OXSMQ9NWU1 459 aa12.43□□□□□ -0.42
VMP1-209ENST00000588915 LIPT1Q9Y234 373 aa12.43□□□□□ -0.42
VMP1-209ENST00000588915 MXRA5Q9NR99 2828 aa12.42□□□□□ -0.42
VMP1-209ENST00000588915 H3BNH8 94 aa12.42□□□□□ -0.42
VMP1-209ENST00000588915 EFNA2O43921 213 aa12.42□□□□□ -0.42
VMP1-209ENST00000588915 ADAP00813 363 aa12.42□□□□□ -0.42
VMP1-209ENST00000588915 PROCP04070 461 aa12.42□□□□□ -0.42
VMP1-209ENST00000588915 SDC1P18827 310 aa12.42□□□□□ -0.42
VMP1-209ENST00000588915 ATP6V1C1P21283 382 aa12.42□□□□□ -0.42
VMP1-209ENST00000588915 CRHR1P34998 444 aa12.42□□□□□ -0.42
VMP1-209ENST00000588915 RPL3P39023 403 aaKnown RBP12.42□□□□□ -0.42
VMP1-209ENST00000588915 RAC3P60763 192 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms