RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 C14orf105Q9NVL8 296 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 CNIH4Q9P003 139 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 TESQ9UGI8 421 aaKnown RBP8.1□□□□□ -1.11
SMAD4-206ENST00000588860 PSORS1C1Q9UIG5 152 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 CBLCQ9ULV8 474 aa8.1□□□□□ -1.11
SMAD4-206ENST00000588860 COL27A1Q8IZC6 1860 aaPredicted RBP8.09□□□□□ -1.11
SMAD4-206ENST00000588860 PCNX3Q9H6A9 2034 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 TCRBV16S1A1N1A0A5B0 115 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 ZNF99A8MXY4 864 aaPredicted RBP8.09□□□□□ -1.11
SMAD4-206ENST00000588860 MAN1A2O60476 641 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 FMO6PO60774 539 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 INMTO95050 263 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 THY1P04216 161 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 SYPP08247 313 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 CT45A8P0DMV1 189 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 CT45A9P0DMV2 189 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 CKMT1AP12532 417 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 PTNP21246 168 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 DRD5P21918 477 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 PCMT1P22061 227 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 DCKP27707 260 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 SLC5A2P31639 672 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 RORAP35398 523 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 STAT5AP42229 794 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 GPR4P46093 362 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 OMPP47874 163 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 MASP1P48740 699 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 FOXC1Q12948 553 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 TSPAN31Q12999 210 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 TUBA3CQ13748 450 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 GINS1Q14691 196 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 ELAVL1Q15717 326 aaKnown RBP8.09□□□□□ -1.11
SMAD4-206ENST00000588860 ZNF141Q15928 474 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 CT45A2Q5DJT8 189 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 PHF19Q5T6S3 580 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 GTF2IRD2BQ6EKJ0 949 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 MBOAT2Q6ZWT7 520 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 COX15Q7KZN9 410 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 PRSS48Q7RTY5 328 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 GTF2IRD2Q86UP8 949 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 NRMQ8IXM6 262 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 TOR1AIP2Q8NFQ8 470 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 OR14A16Q8NHC5 309 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 ZNF420Q8TAQ5 688 aaPredicted RBP8.09□□□□□ -1.11
SMAD4-206ENST00000588860 SLC2A12Q8TD20 617 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 FAR1Q8WVX9 515 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 RORBQ92753 470 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 GGHQ92820 318 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 SENP5Q96HI0 755 aaPredicted RBP8.09□□□□□ -1.11
SMAD4-206ENST00000588860 GFM1Q96RP9 751 aaKnown RBP8.09□□□□□ -1.11
SMAD4-206ENST00000588860 IL4I1Q96RQ9 567 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 GPA33Q99795 319 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 NUDT9Q9BW91 350 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 VN1R1Q9GZP7 353 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 DSN1Q9H410 356 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 EGLN3Q9H6Z9 239 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 TMEM27Q9HBJ8 222 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 SLC25A19Q9HC21 320 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 TBC1D23Q9NUY8 699 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 TOR4AQ9NXH8 423 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 DNAJB12Q9NXW2 375 aaKnown RBP8.09□□□□□ -1.11
SMAD4-206ENST00000588860 CTSFQ9UBX1 484 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 WARS2Q9UGM6 360 aaKnown RBP8.09□□□□□ -1.11
SMAD4-206ENST00000588860 RARRES3Q9UL19 164 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 MKL2Q9ULH7 1088 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 CLCA3PQ9Y6N3 262 aa8.09□□□□□ -1.11
SMAD4-206ENST00000588860 SH3D21A4FU49 640 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 EFCAB10A6NFE3 127 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 ENO4A6NNW6 628 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 CLCA1A8K7I4 914 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 NPIPB9F8W1W9 429 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 H3BMQ9 156 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 ZNF701M0R085 212 aaPredicted RBP8.08□□□□□ -1.12
SMAD4-206ENST00000588860 PRKNO60260 465 aaPredicted RBP8.08□□□□□ -1.12
SMAD4-206ENST00000588860 ENTPD6O75354 484 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 SCRG1O75711 98 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 LYPD3O95274 346 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 DDAH2O95865 285 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 CDK1P06493 297 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 SP9P0CG40 484 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 FPR3P25089 353 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 PSMB9P28065 219 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 SMCPP49901 116 aaPredicted RBP8.08□□□□□ -1.12
SMAD4-206ENST00000588860 DUSP3P51452 185 aaPredicted RBP8.08□□□□□ -1.12
SMAD4-206ENST00000588860 SMSP52788 366 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 EFNA3P52797 238 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 ATP12AP54707 1039 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 GP2P55259 537 aaKnown RBP8.08□□□□□ -1.12
SMAD4-206ENST00000588860 SLC37A1P57057 533 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 SNRPGP62308 76 aaKnown RBP8.08□□□□□ -1.12
SMAD4-206ENST00000588860 PLAURQ03405 335 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 MVKQ03426 396 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 EMX1Q04741 257 aaPredicted RBP8.08□□□□□ -1.12
SMAD4-206ENST00000588860 LSAMPQ13449 338 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 FGFBP1Q14512 234 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 NSDHLQ15738 373 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.08□□□□□ -1.12
SMAD4-206ENST00000588860 ZSWIM7Q19AV6 140 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 HLA-DQA1Q5Y7H0 255 aa8.08□□□□□ -1.12
SMAD4-206ENST00000588860 AP1ARQ63HQ0 302 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms