RNA–Protein interactions for RNA: ENST00000588815.5

CAPNS1-206, Transcript of calpain small subunit 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CAPNS1, Length 1,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-206ENST00000588815 TBC1D25Q3MII6 688 aa28.46■■■□□ 2.15
CAPNS1-206ENST00000588815 DCST1Q5T197 706 aa28.46■■■□□ 2.15
CAPNS1-206ENST00000588815 MAGEE2Q8TD90 523 aaPredicted RBP28.46■■■□□ 2.15
CAPNS1-206ENST00000588815 RNF138Q8WVD3 245 aa28.46■■■□□ 2.15
CAPNS1-206ENST00000588815 C15orf41Q9Y2V0 281 aa28.46■■■□□ 2.15
CAPNS1-206ENST00000588815 GTPBP1O00178 669 aaKnown RBP28.46■■■□□ 2.15
CAPNS1-206ENST00000588815 FAAHO00519 579 aa28.46■■■□□ 2.15
CAPNS1-206ENST00000588815 NDUFB5O43674 189 aa28.46■■■□□ 2.15
CAPNS1-206ENST00000588815 EIF4E2O60573 245 aaKnown RBP28.46■■■□□ 2.15
CAPNS1-206ENST00000588815 UBTFL6P0CB48 400 aaPredicted RBP28.46■■■□□ 2.15
CAPNS1-206ENST00000588815 GKN3PP0CG01 181 aa28.46■■■□□ 2.15
CAPNS1-206ENST00000588815 ANXA8P13928 327 aa28.46■■■□□ 2.15
CAPNS1-206ENST00000588815 ELAVL4P26378 380 aaKnown RBP28.46■■■□□ 2.15
CAPNS1-206ENST00000588815 MLF1P58340 268 aa28.46■■■□□ 2.15
CAPNS1-206ENST00000588815 EPS8Q12929 822 aa28.46■■■□□ 2.15
CAPNS1-206ENST00000588815 TRAM2Q15035 370 aa28.46■■■□□ 2.15
CAPNS1-206ENST00000588815 TGIF1Q15583 401 aa28.46■■■□□ 2.15
CAPNS1-206ENST00000588815 ZNF613Q6PF04 617 aa28.46■■■□□ 2.15
CAPNS1-206ENST00000588815 APOOLQ6UXV4 268 aa28.46■■■□□ 2.15
CAPNS1-206ENST00000588815 LSMEM1Q8N8F7 131 aa28.46■■■□□ 2.15
CAPNS1-206ENST00000588815 OR52J3Q8NH60 311 aa28.46■■■□□ 2.15
CAPNS1-206ENST00000588815 LAT2Q9GZY6 243 aa28.46■■■□□ 2.15
CAPNS1-206ENST00000588815 TMEM27Q9HBJ8 222 aa28.46■■■□□ 2.15
CAPNS1-206ENST00000588815 RHCGQ9UBD6 479 aa28.46■■■□□ 2.15
CAPNS1-206ENST00000588815 MAGED1Q9Y5V3 778 aaPredicted RBP28.46■■■□□ 2.15
CAPNS1-206ENST00000588815 EML6Q6ZMW3 1958 aa28.45■■■□□ 2.14
CAPNS1-206ENST00000588815 TRAPPC13A5PLN9 417 aa28.45■■■□□ 2.14
CAPNS1-206ENST00000588815 CPSF4LA6NMK7 179 aaKnown RBP28.45■■■□□ 2.14
CAPNS1-206ENST00000588815 CYP7B1O75881 506 aa28.45■■■□□ 2.14
CAPNS1-206ENST00000588815 UQCRBP14927 111 aa28.45■■■□□ 2.14
CAPNS1-206ENST00000588815 ACAA2P42765 397 aaKnown RBP28.45■■■□□ 2.14
CAPNS1-206ENST00000588815 SSR4P51571 173 aa28.45■■■□□ 2.14
CAPNS1-206ENST00000588815 RPP38P78345 283 aaKnown RBP28.45■■■□□ 2.14
CAPNS1-206ENST00000588815 Q0VFX4 171 aa28.45■■■□□ 2.14
CAPNS1-206ENST00000588815 HS3ST5Q8IZT8 346 aa28.45■■■□□ 2.14
CAPNS1-206ENST00000588815 SECISBP2Q96T21 854 aaKnown RBP28.45■■■□□ 2.14
CAPNS1-206ENST00000588815 OSBPL11Q9BXB4 747 aa28.45■■■□□ 2.14
CAPNS1-206ENST00000588815 CDCP1Q9H5V8 836 aa28.45■■■□□ 2.14
CAPNS1-206ENST00000588815 SMPD3Q9NY59 655 aaPredicted RBP28.45■■■□□ 2.14
CAPNS1-206ENST00000588815 RAB26Q9ULW5 256 aa28.45■■■□□ 2.14
CAPNS1-206ENST00000588815 TP53I11O14683 189 aa28.44■■■□□ 2.14
CAPNS1-206ENST00000588815 BCAS1O75363 584 aaPredicted RBP28.44■■■□□ 2.14
CAPNS1-206ENST00000588815 CCNB2O95067 398 aa28.44■■■□□ 2.14
CAPNS1-206ENST00000588815 PRG2P13727 222 aa28.44■■■□□ 2.14
CAPNS1-206ENST00000588815 SLC6A8P48029 635 aa28.44■■■□□ 2.14
CAPNS1-206ENST00000588815 FBXW4P57775 412 aa28.44■■■□□ 2.14
CAPNS1-206ENST00000588815 AIMP2Q13155 320 aaKnown RBP28.44■■■□□ 2.14
CAPNS1-206ENST00000588815 SKP2Q13309 424 aa28.44■■■□□ 2.14
CAPNS1-206ENST00000588815 CD226Q15762 336 aa28.44■■■□□ 2.14
CAPNS1-206ENST00000588815 FGD3Q5JSP0 725 aa28.44■■■□□ 2.14
CAPNS1-206ENST00000588815 DCAF10Q5QP82 559 aa28.44■■■□□ 2.14
CAPNS1-206ENST00000588815 TMEM81Q6P7N7 255 aa28.44■■■□□ 2.14
CAPNS1-206ENST00000588815 TSPYL5Q86VY4 417 aaPredicted RBP28.44■■■□□ 2.14
CAPNS1-206ENST00000588815 OR10G2Q8NGC3 310 aa28.44■■■□□ 2.14
CAPNS1-206ENST00000588815 SLC38A4Q969I6 547 aa28.44■■■□□ 2.14
CAPNS1-206ENST00000588815 SLC41A3Q96GZ6 507 aa28.44■■■□□ 2.14
CAPNS1-206ENST00000588815 FUZQ9BT04 418 aa28.44■■■□□ 2.14
CAPNS1-206ENST00000588815 ATP13A2Q9NQ11 1180 aa28.44■■■□□ 2.14
CAPNS1-206ENST00000588815 MAN2C1Q9NTJ4 1040 aa28.44■■■□□ 2.14
CAPNS1-206ENST00000588815 ORC6Q9Y5N6 252 aa28.44■■■□□ 2.14
CAPNS1-206ENST00000588815 ACADSP16219 412 aa28.43■■■□□ 2.14
CAPNS1-206ENST00000588815 RAD23AP54725 363 aa28.43■■■□□ 2.14
CAPNS1-206ENST00000588815 OR1Q1Q15612 314 aa28.43■■■□□ 2.14
CAPNS1-206ENST00000588815 ZNF791Q3KP31 576 aaPredicted RBP28.43■■■□□ 2.14
CAPNS1-206ENST00000588815 CRTC2Q53ET0 693 aaPredicted RBP28.43■■■□□ 2.14
CAPNS1-206ENST00000588815 FAHD1Q6P587 224 aa28.43■■■□□ 2.14
CAPNS1-206ENST00000588815 ASB15Q8WXK1 588 aa28.43■■■□□ 2.14
CAPNS1-206ENST00000588815 THAP4Q8WY91 577 aa28.43■■■□□ 2.14
CAPNS1-206ENST00000588815 KIF17Q9P2E2 1029 aa28.43■■■□□ 2.14
CAPNS1-206ENST00000588815 C7orf72A4D263 438 aa28.42■■■□□ 2.14
CAPNS1-206ENST00000588815 ANGPTL1O95841 491 aa28.42■■■□□ 2.14
CAPNS1-206ENST00000588815 HTR2AP28223 471 aa28.42■■■□□ 2.14
CAPNS1-206ENST00000588815 HOXC5Q00444 222 aa28.42■■■□□ 2.14
CAPNS1-206ENST00000588815 CMPK2Q5EBM0 449 aa28.42■■■□□ 2.14
CAPNS1-206ENST00000588815 KDM4DQ6B0I6 523 aa28.42■■■□□ 2.14
CAPNS1-206ENST00000588815 DESI1Q6ICB0 168 aa28.42■■■□□ 2.14
CAPNS1-206ENST00000588815 SLC7A13Q8TCU3 470 aa28.42■■■□□ 2.14
CAPNS1-206ENST00000588815 GRHL3Q8TE85 626 aa28.42■■■□□ 2.14
CAPNS1-206ENST00000588815 Q9H521 79 aa28.42■■■□□ 2.14
CAPNS1-206ENST00000588815 PCNX3Q9H6A9 2034 aa28.42■■■□□ 2.14
CAPNS1-206ENST00000588815 TRBV4-1A0A0J9YWV2 114 aa28.41■■■□□ 2.14
CAPNS1-206ENST00000588815 PRKACGP22612 351 aa28.41■■■□□ 2.14
CAPNS1-206ENST00000588815 SOX3P41225 446 aa28.41■■■□□ 2.14
CAPNS1-206ENST00000588815 RNF144AP50876 292 aaPredicted RBP28.41■■■□□ 2.14
CAPNS1-206ENST00000588815 COPZ1P61923 177 aa28.41■■■□□ 2.14
CAPNS1-206ENST00000588815 FOXC1Q12948 553 aa28.41■■■□□ 2.14
CAPNS1-206ENST00000588815 MEP1AQ16819 746 aa28.41■■■□□ 2.14
CAPNS1-206ENST00000588815 ATG16L2Q8NAA4 619 aa28.41■■■□□ 2.14
CAPNS1-206ENST00000588815 NODALQ96S42 347 aa28.41■■■□□ 2.14
CAPNS1-206ENST00000588815 BARD1Q99728 777 aaKnown RBP28.41■■■□□ 2.14
CAPNS1-206ENST00000588815 SMURF2Q9HAU4 748 aa28.41■■■□□ 2.14
CAPNS1-206ENST00000588815 SH3PXD2BA1X283 911 aa28.4■■■□□ 2.14
CAPNS1-206ENST00000588815 CDK2AP1O14519 115 aa28.4■■■□□ 2.14
CAPNS1-206ENST00000588815 CDH2P19022 906 aaPredicted RBP28.4■■■□□ 2.14
CAPNS1-206ENST00000588815 RRADP55042 308 aa28.4■■■□□ 2.14
CAPNS1-206ENST00000588815 C17orf67Q0P5P2 114 aa28.4■■■□□ 2.14
CAPNS1-206ENST00000588815 SNTA1Q13424 505 aa28.4■■■□□ 2.14
CAPNS1-206ENST00000588815 TAF11Q15544 211 aa28.4■■■□□ 2.14
CAPNS1-206ENST00000588815 SWT1Q5T5J6 900 aaKnown RBP28.4■■■□□ 2.14
CAPNS1-206ENST00000588815 GDF7Q7Z4P5 450 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms