RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 DTNAQ9Y4J8 743 aa13□□□□□ -0.33
DDX39A-208ENST00000588692 A8MXE2 369 aa12.99□□□□□ -0.33
DDX39A-208ENST00000588692 SHISA8B8ZZ34 492 aa12.99□□□□□ -0.33
DDX39A-208ENST00000588692 EIF1AYO14602 144 aaKnown RBP12.99□□□□□ -0.33
DDX39A-208ENST00000588692 STX11O75558 287 aa12.99□□□□□ -0.33
DDX39A-208ENST00000588692 ALDOCP09972 364 aaKnown RBP12.99□□□□□ -0.33
DDX39A-208ENST00000588692 LINGO3P0C6S8 592 aa12.99□□□□□ -0.33
DDX39A-208ENST00000588692 EPXP11678 715 aa12.99□□□□□ -0.33
DDX39A-208ENST00000588692 UQCRC2P22695 453 aa12.99□□□□□ -0.33
DDX39A-208ENST00000588692 ELK4P28324 431 aa12.99□□□□□ -0.33
DDX39A-208ENST00000588692 S100A3P33764 101 aa12.99□□□□□ -0.33
DDX39A-208ENST00000588692 P2RX1P51575 399 aa12.99□□□□□ -0.33
DDX39A-208ENST00000588692 RPS26P62854 115 aaKnown RBP12.99□□□□□ -0.33
DDX39A-208ENST00000588692 LRRC74AQ0VAA2 488 aa12.99□□□□□ -0.33
DDX39A-208ENST00000588692 CASP8Q14790 479 aa12.99□□□□□ -0.33
DDX39A-208ENST00000588692 SGCBQ16585 318 aa12.99□□□□□ -0.33
DDX39A-208ENST00000588692 FAM174BQ3ZCQ3 159 aa12.99□□□□□ -0.33
DDX39A-208ENST00000588692 SPANXN4Q5MJ08 99 aa12.99□□□□□ -0.33
DDX39A-208ENST00000588692 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.99□□□□□ -0.33
DDX39A-208ENST00000588692 ESPNLQ6ZVH7 1005 aa12.99□□□□□ -0.33
DDX39A-208ENST00000588692 CNEP1R1Q8N9A8 125 aa12.99□□□□□ -0.33
DDX39A-208ENST00000588692 OIT3Q8WWZ8 545 aa12.99□□□□□ -0.33
DDX39A-208ENST00000588692 RNF145Q96MT1 663 aa12.99□□□□□ -0.33
DDX39A-208ENST00000588692 POLDIP3Q9BY77 421 aaKnown RBP12.99□□□□□ -0.33
DDX39A-208ENST00000588692 CLEC4MQ9H2X3 399 aaPredicted RBP12.99□□□□□ -0.33
DDX39A-208ENST00000588692 SERHL2Q9H4I8 314 aa12.99□□□□□ -0.33
DDX39A-208ENST00000588692 RASSF1Q9NS23 344 aa12.99□□□□□ -0.33
DDX39A-208ENST00000588692 ICAM5Q9UMF0 924 aa12.99□□□□□ -0.33
DDX39A-208ENST00000588692 SPG11Q96JI7 2443 aa12.99□□□□□ -0.33
DDX39A-208ENST00000588692 KLF11O14901 512 aa12.98□□□□□ -0.33
DDX39A-208ENST00000588692 ADAMDEC1O15204 470 aa12.98□□□□□ -0.33
DDX39A-208ENST00000588692 GUSBP08236 651 aa12.98□□□□□ -0.33
DDX39A-208ENST00000588692 ADH6P28332 368 aa12.98□□□□□ -0.33
DDX39A-208ENST00000588692 EIF1AXP47813 144 aaKnown RBP12.98□□□□□ -0.33
DDX39A-208ENST00000588692 ARHGAP11BQ3KRB8 267 aa12.98□□□□□ -0.33
DDX39A-208ENST00000588692 PDSS1Q5T2R2 415 aa12.98□□□□□ -0.33
DDX39A-208ENST00000588692 C16orf62Q7Z3J2 963 aa12.98□□□□□ -0.33
DDX39A-208ENST00000588692 ANKRD46Q86W74 232 aa12.98□□□□□ -0.33
DDX39A-208ENST00000588692 TOR1AIP2Q8NFQ8 470 aa12.98□□□□□ -0.33
DDX39A-208ENST00000588692 STARD4Q96DR4 205 aa12.98□□□□□ -0.33
DDX39A-208ENST00000588692 NEURL3Q96EH8 262 aa12.98□□□□□ -0.33
DDX39A-208ENST00000588692 ZNF845Q96IR2 970 aaPredicted RBP12.98□□□□□ -0.33
DDX39A-208ENST00000588692 ADGRG7Q96K78 797 aa12.98□□□□□ -0.33
DDX39A-208ENST00000588692 CCDC115Q96NT0 180 aa12.98□□□□□ -0.33
DDX39A-208ENST00000588692 GPATCH1Q9BRR8 931 aaKnown RBP12.98□□□□□ -0.33
DDX39A-208ENST00000588692 ZNF350Q9GZX5 532 aa12.98□□□□□ -0.33
DDX39A-208ENST00000588692 MANSC1Q9H8J5 431 aa12.98□□□□□ -0.33
DDX39A-208ENST00000588692 POLE3Q9NRF9 147 aa12.98□□□□□ -0.33
DDX39A-208ENST00000588692 MARCOQ9UEW3 520 aaPredicted RBP12.98□□□□□ -0.33
DDX39A-208ENST00000588692 BTNL2Q9UIR0 455 aa12.98□□□□□ -0.33
DDX39A-208ENST00000588692 ITGB1BP2Q9UKP3 347 aa12.98□□□□□ -0.33
DDX39A-208ENST00000588692 MCTS1Q9ULC4 181 aaKnown RBP12.98□□□□□ -0.33
DDX39A-208ENST00000588692 GPC6Q9Y625 555 aaPredicted RBP12.98□□□□□ -0.33
DDX39A-208ENST00000588692 NPIPA5A0A0B4J1W7 369 aa12.97□□□□□ -0.33
DDX39A-208ENST00000588692 NPIPA7E9PJI5 369 aa12.97□□□□□ -0.33
DDX39A-208ENST00000588692 GTPBP1O00178 669 aaKnown RBP12.97□□□□□ -0.33
DDX39A-208ENST00000588692 ZNF264O43296 627 aa12.97□□□□□ -0.33
DDX39A-208ENST00000588692 EIF4E2O60573 245 aaKnown RBP12.97□□□□□ -0.33
DDX39A-208ENST00000588692 SMNDC1O75940 238 aaKnown RBP eCLIP12.97□□□□□ -0.337e-7■■□□□ 13.3
DDX39A-208ENST00000588692 CPSF4O95639 269 aaKnown RBP12.97□□□□□ -0.33
DDX39A-208ENST00000588692 NUDT14O95848 222 aa12.97□□□□□ -0.33
DDX39A-208ENST00000588692 NPIPA8P0DM63 369 aa12.97□□□□□ -0.33
DDX39A-208ENST00000588692 CD8BP10966 210 aa12.97□□□□□ -0.33
DDX39A-208ENST00000588692 UBL4AP11441 157 aa12.97□□□□□ -0.33
DDX39A-208ENST00000588692 EPHA3P29320 983 aa12.97□□□□□ -0.33
DDX39A-208ENST00000588692 KIR2DL2P43627 348 aaPredicted RBP12.97□□□□□ -0.33
DDX39A-208ENST00000588692 PHC1P78364 1004 aa12.97□□□□□ -0.33
DDX39A-208ENST00000588692 GUSBP1Q15486 140 aa12.97□□□□□ -0.33
DDX39A-208ENST00000588692 ZNF141Q15928 474 aa12.97□□□□□ -0.33
DDX39A-208ENST00000588692 CTU2Q2VPK5 515 aaKnown RBP12.97□□□□□ -0.33
DDX39A-208ENST00000588692 ATAD3BQ5T9A4 648 aa12.97□□□□□ -0.33
DDX39A-208ENST00000588692 AGBL2Q5U5Z8 902 aa12.97□□□□□ -0.33
DDX39A-208ENST00000588692 SAXO2Q658L1 398 aa12.97□□□□□ -0.33
DDX39A-208ENST00000588692 HEPHL1Q6MZM0 1159 aa12.97□□□□□ -0.33
DDX39A-208ENST00000588692 VWA1Q6PCB0 445 aa12.97□□□□□ -0.33
DDX39A-208ENST00000588692 CBLN3Q6UW01 205 aa12.97□□□□□ -0.33
DDX39A-208ENST00000588692 CLEC4FQ8N1N0 589 aa12.97□□□□□ -0.33
DDX39A-208ENST00000588692 TRIML2Q8N7C3 387 aa12.97□□□□□ -0.33
DDX39A-208ENST00000588692 ZNF614Q8N883 585 aa12.97□□□□□ -0.33
DDX39A-208ENST00000588692 GLB1L3Q8NCI6 653 aaPredicted RBP12.97□□□□□ -0.33
DDX39A-208ENST00000588692 OR10D3Q8NH80 312 aa12.97□□□□□ -0.33
DDX39A-208ENST00000588692 OR2V1Q8NHB1 315 aa12.97□□□□□ -0.33
DDX39A-208ENST00000588692 POC1BQ8TC44 478 aa12.97□□□□□ -0.33
DDX39A-208ENST00000588692 DACH2Q96NX9 599 aa12.97□□□□□ -0.33
DDX39A-208ENST00000588692 ZBTB18Q99592 522 aa12.97□□□□□ -0.33
DDX39A-208ENST00000588692 PRRG4Q9BZD6 226 aa12.97□□□□□ -0.33
DDX39A-208ENST00000588692 OR51I1Q9H343 314 aa12.97□□□□□ -0.33
DDX39A-208ENST00000588692 EDARQ9UNE0 448 aa12.97□□□□□ -0.33
DDX39A-208ENST00000588692 CARD8Q9Y2G2 431 aa12.97□□□□□ -0.33
DDX39A-208ENST00000588692 GPR45Q9Y5Y3 372 aa12.97□□□□□ -0.33
DDX39A-208ENST00000588692 HRNRQ86YZ3 2850 aaPredicted RBP12.97□□□□□ -0.33
DDX39A-208ENST00000588692 GOLGA8QA0A0J9YX86 632 aa12.97□□□□□ -0.33
DDX39A-208ENST00000588692 GOLGA8OA6NCC3 632 aa12.97□□□□□ -0.33
DDX39A-208ENST00000588692 SERINC4A6NH21 518 aa12.97□□□□□ -0.33
DDX39A-208ENST00000588692 GJE1A6NN92 205 aa12.97□□□□□ -0.33
DDX39A-208ENST00000588692 GOLGA8NF8WBI6 632 aa12.97□□□□□ -0.33
DDX39A-208ENST00000588692 SYNGR4O95473 234 aa12.97□□□□□ -0.33
DDX39A-208ENST00000588692 PGRP06401 933 aa12.97□□□□□ -0.33
DDX39A-208ENST00000588692 KITP10721 976 aa12.97□□□□□ -0.33
DDX39A-208ENST00000588692 IDO1P14902 403 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms