RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 KLHDC3Q9BQ90 382 aa10.35□□□□□ -0.75
VMP1-207ENST00000588131 TBL1XR1Q9BZK7 514 aa10.35□□□□□ -0.75
VMP1-207ENST00000588131 LHPPQ9H008 270 aa10.35□□□□□ -0.75
VMP1-207ENST00000588131 ARMC7Q9H6L4 198 aa10.35□□□□□ -0.75
VMP1-207ENST00000588131 COQ10BQ9H8M1 238 aa10.35□□□□□ -0.75
VMP1-207ENST00000588131 REEP1Q9H902 201 aa10.35□□□□□ -0.75
VMP1-207ENST00000588131 ACER3Q9NUN7 267 aa10.35□□□□□ -0.75
VMP1-207ENST00000588131 CARD8Q9Y2G2 431 aa10.35□□□□□ -0.75
VMP1-207ENST00000588131 SAMHD1Q9Y3Z3 626 aaKnown RBP10.35□□□□□ -0.75
VMP1-207ENST00000588131 FAM32AQ9Y421 112 aaKnown RBP10.35□□□□□ -0.75
VMP1-207ENST00000588131 HRH3Q9Y5N1 445 aa10.35□□□□□ -0.75
VMP1-207ENST00000588131 LYVE1Q9Y5Y7 322 aa10.35□□□□□ -0.75
VMP1-207ENST00000588131 CPAMD8Q8IZJ3 1885 aa10.34□□□□□ -0.75
VMP1-207ENST00000588131 C2orf72A6NCS6 295 aa10.34□□□□□ -0.75
VMP1-207ENST00000588131 TNFRSF11BO00300 401 aa10.34□□□□□ -0.75
VMP1-207ENST00000588131 SOCS2O14508 198 aa10.34□□□□□ -0.75
VMP1-207ENST00000588131 ADAMDEC1O15204 470 aa10.34□□□□□ -0.75
VMP1-207ENST00000588131 ZNF264O43296 627 aa10.34□□□□□ -0.75
VMP1-207ENST00000588131 NDUFB5O43674 189 aa10.34□□□□□ -0.75
VMP1-207ENST00000588131 E2F6O75461 281 aa10.34□□□□□ -0.75
VMP1-207ENST00000588131 GADD45GO95257 159 aa10.34□□□□□ -0.75
VMP1-207ENST00000588131 THY1P04216 161 aa10.34□□□□□ -0.75
VMP1-207ENST00000588131 ZNF23P17027 643 aa10.34□□□□□ -0.75
VMP1-207ENST00000588131 VHLP40337 213 aa10.34□□□□□ -0.75
VMP1-207ENST00000588131 LIMS1P48059 325 aa10.34□□□□□ -0.75
VMP1-207ENST00000588131 TAS2R41P59536 307 aa10.34□□□□□ -0.75
VMP1-207ENST00000588131 EPS8Q12929 822 aa10.34□□□□□ -0.75
VMP1-207ENST00000588131 RAPSNQ13702 412 aa10.34□□□□□ -0.75
VMP1-207ENST00000588131 ZSWIM7Q19AV6 140 aa10.34□□□□□ -0.75
VMP1-207ENST00000588131 EXOC3L2Q2M3D2 409 aa10.34□□□□□ -0.75
VMP1-207ENST00000588131 CRTC2Q53ET0 693 aaPredicted RBP10.34□□□□□ -0.75
VMP1-207ENST00000588131 ANKRD34AQ69YU3 496 aa10.34□□□□□ -0.75
VMP1-207ENST00000588131 PLEKHM3Q6ZWE6 761 aa10.34□□□□□ -0.75
VMP1-207ENST00000588131 ZNF550Q7Z398 422 aa10.34□□□□□ -0.75
VMP1-207ENST00000588131 PACS2Q86VP3 889 aa10.34□□□□□ -0.75
VMP1-207ENST00000588131 RANBP3LQ86VV4 465 aaPredicted RBP10.34□□□□□ -0.75
VMP1-207ENST00000588131 OFCC1Q8IZS5 231 aa10.34□□□□□ -0.75
VMP1-207ENST00000588131 GALNT16Q8N428 558 aa10.34□□□□□ -0.75
VMP1-207ENST00000588131 TMEM156Q8N614 296 aa10.34□□□□□ -0.75
VMP1-207ENST00000588131 OR52J3Q8NH60 311 aa10.34□□□□□ -0.75
VMP1-207ENST00000588131 OR5K1Q8NHB7 308 aa10.34□□□□□ -0.75
VMP1-207ENST00000588131 EME1Q96AY2 570 aa10.34□□□□□ -0.75
VMP1-207ENST00000588131 SH3YL1Q96HL8 342 aaPredicted RBP10.34□□□□□ -0.75
VMP1-207ENST00000588131 SLC29A1Q99808 456 aa10.34□□□□□ -0.75
VMP1-207ENST00000588131 EVA1AQ9H8M9 152 aa10.34□□□□□ -0.75
VMP1-207ENST00000588131 NMNAT1Q9HAN9 279 aaPredicted RBP10.34□□□□□ -0.75
VMP1-207ENST00000588131 GALNT9Q9HCQ5 603 aa10.34□□□□□ -0.75
VMP1-207ENST00000588131 EXOSC3Q9NQT5 275 aaKnown RBP10.34□□□□□ -0.75
VMP1-207ENST00000588131 MAN2C1Q9NTJ4 1040 aa10.34□□□□□ -0.75
VMP1-207ENST00000588131 ANKRD10Q9NXR5 420 aa10.34□□□□□ -0.75
VMP1-207ENST00000588131 TESQ9UGI8 421 aaKnown RBP10.34□□□□□ -0.75
VMP1-207ENST00000588131 CHCHD2Q9Y6H1 151 aaPredicted RBP10.34□□□□□ -0.75
VMP1-207ENST00000588131 A6NL46 340 aa10.33□□□□□ -0.76
VMP1-207ENST00000588131 B4DXG7 233 aa10.33□□□□□ -0.76
VMP1-207ENST00000588131 G3V2T6 193 aa10.33□□□□□ -0.76
VMP1-207ENST00000588131 H3BNH8 94 aa10.33□□□□□ -0.76
VMP1-207ENST00000588131 GTPBP1O00178 669 aaKnown RBP10.33□□□□□ -0.76
VMP1-207ENST00000588131 GMFGO60234 142 aa10.33□□□□□ -0.76
VMP1-207ENST00000588131 FMO6PO60774 539 aa10.33□□□□□ -0.76
VMP1-207ENST00000588131 OR5F1O95221 314 aa10.33□□□□□ -0.76
VMP1-207ENST00000588131 LYPD3O95274 346 aa10.33□□□□□ -0.76
VMP1-207ENST00000588131 NTN1O95631 604 aa10.33□□□□□ -0.76
VMP1-207ENST00000588131 H1F0P07305 194 aaKnown RBP10.33□□□□□ -0.76
VMP1-207ENST00000588131 ADRB1P08588 477 aa10.33□□□□□ -0.76
VMP1-207ENST00000588131 CCL3P10147 92 aa10.33□□□□□ -0.76
VMP1-207ENST00000588131 ZNF26P17031 533 aaPredicted RBP10.33□□□□□ -0.76
VMP1-207ENST00000588131 FPR1P21462 350 aa10.33□□□□□ -0.76
VMP1-207ENST00000588131 PRKACGP22612 351 aa10.33□□□□□ -0.76
VMP1-207ENST00000588131 DNAJA1P31689 397 aaKnown RBP10.33□□□□□ -0.76
VMP1-207ENST00000588131 RYKP34925 604 aa10.33□□□□□ -0.76
VMP1-207ENST00000588131 CASP3P42574 277 aa10.33□□□□□ -0.76
VMP1-207ENST00000588131 CLK3P49761 638 aaKnown RBP10.33□□□□□ -0.76
VMP1-207ENST00000588131 RRADP55042 308 aa10.33□□□□□ -0.76
VMP1-207ENST00000588131 OR1Q1Q15612 314 aa10.33□□□□□ -0.76
VMP1-207ENST00000588131 DEFB109BQ30KR1 87 aa10.33□□□□□ -0.76
VMP1-207ENST00000588131 COLEC12Q5KU26 742 aa10.33□□□□□ -0.76
VMP1-207ENST00000588131 PRAMEF20Q5VT98 475 aa10.33□□□□□ -0.76
VMP1-207ENST00000588131 SHQ1Q6PI26 577 aaKnown RBP10.33□□□□□ -0.76
VMP1-207ENST00000588131 GDF7Q7Z4P5 450 aa10.33□□□□□ -0.76
VMP1-207ENST00000588131 STK32CQ86UX6 486 aa10.33□□□□□ -0.76
VMP1-207ENST00000588131 ZNF227Q86WZ6 799 aa10.33□□□□□ -0.76
VMP1-207ENST00000588131 SVOPLQ8N434 492 aa10.33□□□□□ -0.76
VMP1-207ENST00000588131 CBR4Q8N4T8 237 aa10.33□□□□□ -0.76
VMP1-207ENST00000588131 TMCO5AQ8N6Q1 288 aa10.33□□□□□ -0.76
VMP1-207ENST00000588131 ADAMTS16Q8TE57 1224 aa10.33□□□□□ -0.76
VMP1-207ENST00000588131 SLC35B4Q969S0 331 aa10.33□□□□□ -0.76
VMP1-207ENST00000588131 ZNF524Q96C55 264 aa10.33□□□□□ -0.76
VMP1-207ENST00000588131 SLC41A3Q96GZ6 507 aa10.33□□□□□ -0.76
VMP1-207ENST00000588131 CCNL2Q96S94 520 aaPredicted RBP10.33□□□□□ -0.76
VMP1-207ENST00000588131 EPYCQ99645 322 aa10.33□□□□□ -0.76
VMP1-207ENST00000588131 ZNF559Q9BR84 538 aa10.33□□□□□ -0.76
VMP1-207ENST00000588131 TACO1Q9BSH4 297 aaKnown RBP10.33□□□□□ -0.76
VMP1-207ENST00000588131 C9orf16Q9BUW7 83 aa10.33□□□□□ -0.76
VMP1-207ENST00000588131 FNDC11Q9BVV2 318 aa10.33□□□□□ -0.76
VMP1-207ENST00000588131 OSBPL11Q9BXB4 747 aa10.33□□□□□ -0.76
VMP1-207ENST00000588131 DPH1Q9BZG8 443 aa10.33□□□□□ -0.76
VMP1-207ENST00000588131 KLHL4Q9C0H6 718 aa10.33□□□□□ -0.76
VMP1-207ENST00000588131 LAT2Q9GZY6 243 aa10.33□□□□□ -0.76
VMP1-207ENST00000588131 ING2Q9H160 280 aa10.33□□□□□ -0.76
VMP1-207ENST00000588131 METTL7AQ9H8H3 244 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms