RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 MARVELD3Q96A59 401 aa17.28■□□□□ 0.36
DDX39A-206ENST00000587730 SLC22A18Q96BI1 424 aa17.28■□□□□ 0.36
DDX39A-206ENST00000587730 ZNF707Q96C28 371 aaPredicted RBP17.28■□□□□ 0.36
DDX39A-206ENST00000587730 RSPRY1Q96DX4 576 aa17.28■□□□□ 0.36
DDX39A-206ENST00000587730 CMTM3Q96MX0 182 aa17.28■□□□□ 0.36
DDX39A-206ENST00000587730 OR2M2Q96R28 347 aa17.28■□□□□ 0.36
DDX39A-206ENST00000587730 IL23AQ9NPF7 189 aa17.28■□□□□ 0.36
DDX39A-206ENST00000587730 EMC3Q9P0I2 261 aa17.28■□□□□ 0.36
DDX39A-206ENST00000587730 SLC35A3Q9Y2D2 325 aa17.28■□□□□ 0.36
DDX39A-206ENST00000587730 HSPB11Q9Y547 144 aa17.28■□□□□ 0.36
DDX39A-206ENST00000587730 LAMA2P24043 3122 aaKnown RBP17.28■□□□□ 0.36
DDX39A-206ENST00000587730 TRAV1-2A0A0B4J238 106 aa17.28■□□□□ 0.36
DDX39A-206ENST00000587730 HRO43593 1189 aa17.28■□□□□ 0.36
DDX39A-206ENST00000587730 PIP5K1CO60331 668 aa17.28■□□□□ 0.36
DDX39A-206ENST00000587730 FCMRO60667 390 aa17.28■□□□□ 0.36
DDX39A-206ENST00000587730 ACRP10323 421 aa17.28■□□□□ 0.36
DDX39A-206ENST00000587730 DRD3P35462 400 aa17.28■□□□□ 0.36
DDX39A-206ENST00000587730 ZNF136P52737 540 aa17.28■□□□□ 0.36
DDX39A-206ENST00000587730 RAB8AP61006 207 aa17.28■□□□□ 0.36
DDX39A-206ENST00000587730 BTN3A2P78410 334 aa17.28■□□□□ 0.36
DDX39A-206ENST00000587730 CCDC58Q4VC31 144 aa17.28■□□□□ 0.36
DDX39A-206ENST00000587730 GARNL3Q5VVW2 1013 aa17.28■□□□□ 0.36
DDX39A-206ENST00000587730 NUDT18Q6ZVK8 323 aa17.28■□□□□ 0.36
DDX39A-206ENST00000587730 PXKQ7Z7A4 578 aa17.28■□□□□ 0.36
DDX39A-206ENST00000587730 LUZP2Q86TE4 346 aa17.28■□□□□ 0.36
DDX39A-206ENST00000587730 CADM2Q8N3J6 435 aa17.28■□□□□ 0.36
DDX39A-206ENST00000587730 SAMD12Q8N8I0 201 aa17.28■□□□□ 0.36
DDX39A-206ENST00000587730 SLC16A11Q8NCK7 471 aa17.28■□□□□ 0.36
DDX39A-206ENST00000587730 OR4M1Q8NGD0 313 aa17.28■□□□□ 0.36
DDX39A-206ENST00000587730 KAT2AQ92830 837 aa17.28■□□□□ 0.36
DDX39A-206ENST00000587730 CDS1Q92903 461 aa17.28■□□□□ 0.36
DDX39A-206ENST00000587730 C10orf90Q96M02 699 aa17.28■□□□□ 0.36
DDX39A-206ENST00000587730 SERINC2Q96SA4 455 aa17.28■□□□□ 0.36
DDX39A-206ENST00000587730 ACTR6Q9GZN1 396 aa17.28■□□□□ 0.36
DDX39A-206ENST00000587730 ZNF350Q9GZX5 532 aa17.28■□□□□ 0.36
DDX39A-206ENST00000587730 ISG20L2Q9H9L3 353 aaKnown RBP17.28■□□□□ 0.36
DDX39A-206ENST00000587730 POLMQ9NP87 494 aaPredicted RBP17.28■□□□□ 0.36
DDX39A-206ENST00000587730 POLE3Q9NRF9 147 aa17.28■□□□□ 0.36
DDX39A-206ENST00000587730 ABRACLQ9P1F3 81 aa17.28■□□□□ 0.36
DDX39A-206ENST00000587730 APOBEC3BQ9UH17 382 aaKnown RBP17.28■□□□□ 0.36
DDX39A-206ENST00000587730 OR1A2Q9Y585 309 aa17.28■□□□□ 0.36
DDX39A-206ENST00000587730 TBC1D3EA0A087X179 549 aa17.27■□□□□ 0.36
DDX39A-206ENST00000587730 CDC42EP2O14613 210 aa17.27■□□□□ 0.36
DDX39A-206ENST00000587730 ZIC2O95409 532 aaPredicted RBP17.27■□□□□ 0.36
DDX39A-206ENST00000587730 SLC35G6P0C7Q6 338 aa17.27■□□□□ 0.36
DDX39A-206ENST00000587730 ITGB8P26012 769 aa17.27■□□□□ 0.36
DDX39A-206ENST00000587730 THBS2P35442 1172 aa17.27■□□□□ 0.36
DDX39A-206ENST00000587730 VIPR2P41587 438 aa17.27■□□□□ 0.36
DDX39A-206ENST00000587730 NRG3P56975 720 aa17.27■□□□□ 0.36
DDX39A-206ENST00000587730 IKZF1Q13422 519 aa17.27■□□□□ 0.36
DDX39A-206ENST00000587730 SUZ12Q15022 739 aaKnown RBP17.27■□□□□ 0.36
DDX39A-206ENST00000587730 CST6Q15828 149 aa17.27■□□□□ 0.36
DDX39A-206ENST00000587730 PAQR7Q86WK9 346 aa17.27■□□□□ 0.36
DDX39A-206ENST00000587730 FAM109AQ8N4B1 249 aa17.27■□□□□ 0.36
DDX39A-206ENST00000587730 OR7G2Q8NG99 324 aa17.27■□□□□ 0.36
DDX39A-206ENST00000587730 SMARCD2Q92925 531 aa17.27■□□□□ 0.36
DDX39A-206ENST00000587730 TRIM43Q96BQ3 446 aaPredicted RBP17.27■□□□□ 0.36
DDX39A-206ENST00000587730 MRPL48Q96GC5 212 aaKnown RBP17.27■□□□□ 0.36
DDX39A-206ENST00000587730 SCMH1Q96GD3 660 aa17.27■□□□□ 0.36
DDX39A-206ENST00000587730 RSPH9Q9H1X1 276 aaPredicted RBP17.27■□□□□ 0.36
DDX39A-206ENST00000587730 MBNL1Q9NR56 388 aaKnown RBP17.27■□□□□ 0.36
DDX39A-206ENST00000587730 NOTCH4Q99466 2003 aa17.27■□□□□ 0.36
DDX39A-206ENST00000587730 ERVH48-1M5A8F1 160 aa17.26■□□□□ 0.35
DDX39A-206ENST00000587730 NOS1APO75052 506 aaPredicted RBP17.26■□□□□ 0.35
DDX39A-206ENST00000587730 UBL3O95164 117 aa17.26■□□□□ 0.35
DDX39A-206ENST00000587730 SLC2A10O95528 541 aa17.26■□□□□ 0.35
DDX39A-206ENST00000587730 IFNGP01579 166 aa17.26■□□□□ 0.35
DDX39A-206ENST00000587730 ZGLP1P0C6A0 271 aa17.26■□□□□ 0.35
DDX39A-206ENST00000587730 SAGP10523 405 aaPredicted RBP17.26■□□□□ 0.35
DDX39A-206ENST00000587730 LAMP2P13473 410 aa17.26■□□□□ 0.35
DDX39A-206ENST00000587730 NID1P14543 1247 aa17.26■□□□□ 0.35
DDX39A-206ENST00000587730 ZNF3P17036 446 aa17.26■□□□□ 0.35
DDX39A-206ENST00000587730 BMP8BP34820 402 aa17.26■□□□□ 0.35
DDX39A-206ENST00000587730 P2RX3P56373 397 aa17.26■□□□□ 0.35
DDX39A-206ENST00000587730 RPS21P63220 83 aaKnown RBP17.26■□□□□ 0.35
DDX39A-206ENST00000587730 GPLD1P80108 840 aa17.26■□□□□ 0.35
DDX39A-206ENST00000587730 SGCGQ13326 291 aa17.26■□□□□ 0.35
DDX39A-206ENST00000587730 CCDC85BQ15834 202 aaPredicted RBP17.26■□□□□ 0.35
DDX39A-206ENST00000587730 NTRK2Q16620 822 aa17.26■□□□□ 0.35
DDX39A-206ENST00000587730 USP53Q70EK8 1073 aa17.26■□□□□ 0.35
DDX39A-206ENST00000587730 BMP8AQ7Z5Y6 402 aa17.26■□□□□ 0.35
DDX39A-206ENST00000587730 FBXL6Q8N531 539 aa17.26■□□□□ 0.35
DDX39A-206ENST00000587730 OR10H4Q8NGA5 316 aa17.26■□□□□ 0.35
DDX39A-206ENST00000587730 ABHD4Q8TB40 342 aa17.26■□□□□ 0.35
DDX39A-206ENST00000587730 GFM1Q96RP9 751 aaKnown RBP17.26■□□□□ 0.35
DDX39A-206ENST00000587730 STACQ99469 402 aa17.26■□□□□ 0.35
DDX39A-206ENST00000587730 SDF2Q99470 211 aa17.26■□□□□ 0.35
DDX39A-206ENST00000587730 PRSS27Q9BQR3 290 aa17.26■□□□□ 0.35
DDX39A-206ENST00000587730 MKRN2Q9H000 416 aaKnown RBP17.26■□□□□ 0.35
DDX39A-206ENST00000587730 GALNT9Q9HCQ5 603 aa17.26■□□□□ 0.35
DDX39A-206ENST00000587730 DUSP22Q9NRW4 184 aa17.26■□□□□ 0.35
DDX39A-206ENST00000587730 KCNK6Q9Y257 313 aa17.26■□□□□ 0.35
DDX39A-206ENST00000587730 RASD1Q9Y272 281 aa17.26■□□□□ 0.35
DDX39A-206ENST00000587730 MED31Q9Y3C7 131 aa17.26■□□□□ 0.35
DDX39A-206ENST00000587730 A0A087WV62 115 aa17.26■□□□□ 0.35
DDX39A-206ENST00000587730 A0A1B0GVI7 797 aa17.26■□□□□ 0.35
DDX39A-206ENST00000587730 CHP2O43745 196 aa17.26■□□□□ 0.35
DDX39A-206ENST00000587730 ARL6IP5O75915 188 aa17.26■□□□□ 0.35
DDX39A-206ENST00000587730 CD1AP06126 327 aa17.26■□□□□ 0.35
DDX39A-206ENST00000587730 ANXA3P12429 323 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms