RNA–Protein interactions for RNA: ENST00000585058.1

RAB11FIP4-210, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 2

Gene RAB11FIP4, Length 5,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-210ENST00000585058 BADQ92934 168 aa12.49□□□□□ -0.41
RAB11FIP4-210ENST00000585058 TBC1D20Q96BZ9 403 aa12.49□□□□□ -0.41
RAB11FIP4-210ENST00000585058 BCL7BQ9BQE9 202 aa12.49□□□□□ -0.41
RAB11FIP4-210ENST00000585058 PPP1R14DQ9NXH3 145 aa12.49□□□□□ -0.41
RAB11FIP4-210ENST00000585058 ENPP5Q9UJA9 477 aa12.49□□□□□ -0.41
RAB11FIP4-210ENST00000585058 NAP1L6A6NFF2 107 aa12.48□□□□□ -0.41
RAB11FIP4-210ENST00000585058 MT-ND4P03905 459 aa12.48□□□□□ -0.41
RAB11FIP4-210ENST00000585058 HBQ1P09105 142 aa12.48□□□□□ -0.41
RAB11FIP4-210ENST00000585058 CHRNB1P11230 501 aa12.48□□□□□ -0.41
RAB11FIP4-210ENST00000585058 UBL4AP11441 157 aa12.48□□□□□ -0.41
RAB11FIP4-210ENST00000585058 TDGQ13569 410 aa12.48□□□□□ -0.41
RAB11FIP4-210ENST00000585058 SF3A2Q15428 464 aaKnown RBP12.48□□□□□ -0.41
RAB11FIP4-210ENST00000585058 C3orf58Q8NDZ4 430 aa12.48□□□□□ -0.41
RAB11FIP4-210ENST00000585058 BEST4Q8NFU0 473 aa12.48□□□□□ -0.41
RAB11FIP4-210ENST00000585058 OR9A4Q8NGU2 314 aa12.48□□□□□ -0.41
RAB11FIP4-210ENST00000585058 CDS1Q92903 461 aa12.48□□□□□ -0.41
RAB11FIP4-210ENST00000585058 ZNF587Q96SQ5 575 aaPredicted RBP12.48□□□□□ -0.41
RAB11FIP4-210ENST00000585058 USB1Q9BQ65 265 aaKnown RBP12.48□□□□□ -0.41
RAB11FIP4-210ENST00000585058 CPEB1Q9BZB8 566 aaKnown RBP12.48□□□□□ -0.41
RAB11FIP4-210ENST00000585058 DDX31Q9H8H2 851 aaKnown RBP12.48□□□□□ -0.41
RAB11FIP4-210ENST00000585058 IL26Q9NPH9 171 aa12.48□□□□□ -0.41
RAB11FIP4-210ENST00000585058 RNASET2O00584 256 aaKnown RBP12.48□□□□□ -0.41
RAB11FIP4-210ENST00000585058 HPGDSO60760 199 aa12.48□□□□□ -0.41
RAB11FIP4-210ENST00000585058 CHATP28329 748 aa12.48□□□□□ -0.41
RAB11FIP4-210ENST00000585058 SLC6A8P48029 635 aa12.48□□□□□ -0.41
RAB11FIP4-210ENST00000585058 RRAS2P62070 204 aaPredicted RBP12.48□□□□□ -0.41
RAB11FIP4-210ENST00000585058 C14orf28Q4W4Y0 310 aa12.48□□□□□ -0.41
RAB11FIP4-210ENST00000585058 ACVR1CQ8NER5 493 aa12.48□□□□□ -0.41
RAB11FIP4-210ENST00000585058 FOXJ1Q92949 421 aa12.48□□□□□ -0.41
RAB11FIP4-210ENST00000585058 ZNF486Q96H40 463 aaPredicted RBP12.48□□□□□ -0.41
RAB11FIP4-210ENST00000585058 FOXN4Q96NZ1 517 aa12.48□□□□□ -0.41
RAB11FIP4-210ENST00000585058 OR6C2Q9NZP2 312 aa12.48□□□□□ -0.41
RAB11FIP4-210ENST00000585058 ANKRD30BLA7E2S9 258 aa12.48□□□□□ -0.41
RAB11FIP4-210ENST00000585058 LDB3O75112 727 aa12.48□□□□□ -0.41
RAB11FIP4-210ENST00000585058 OPN1LWP04000 364 aa12.48□□□□□ -0.41
RAB11FIP4-210ENST00000585058 TTC9BQ8N6N2 239 aa12.48□□□□□ -0.41
RAB11FIP4-210ENST00000585058 OR4K15Q8NH41 348 aa12.48□□□□□ -0.41
RAB11FIP4-210ENST00000585058 PAQR8Q8TEZ7 354 aa12.48□□□□□ -0.41
RAB11FIP4-210ENST00000585058 INTS14Q96SY0 518 aa12.48□□□□□ -0.41
RAB11FIP4-210ENST00000585058 ACAD8Q9UKU7 415 aa12.48□□□□□ -0.41
RAB11FIP4-210ENST00000585058 A0A0A6YYC8 382 aaPredicted RBP12.48□□□□□ -0.41
RAB11FIP4-210ENST00000585058 A6NL46 340 aa12.48□□□□□ -0.41
RAB11FIP4-210ENST00000585058 I3L1I5 382 aaPredicted RBP12.48□□□□□ -0.41
RAB11FIP4-210ENST00000585058 SULT2B1O00204 365 aa12.48□□□□□ -0.41
RAB11FIP4-210ENST00000585058 NUPL2O15504 423 aaKnown RBP12.48□□□□□ -0.41
RAB11FIP4-210ENST00000585058 B4GAT1O43505 415 aa12.48□□□□□ -0.41
RAB11FIP4-210ENST00000585058 CXCR4P61073 352 aa12.48□□□□□ -0.41
RAB11FIP4-210ENST00000585058 C1orf220Q5T0J3 134 aa12.48□□□□□ -0.41
RAB11FIP4-210ENST00000585058 ZNF585AQ6P3V2 769 aa12.48□□□□□ -0.41
RAB11FIP4-210ENST00000585058 NEIL2Q969S2 332 aa12.48□□□□□ -0.41
RAB11FIP4-210ENST00000585058 C4orf36Q96KX1 117 aa12.48□□□□□ -0.41
RAB11FIP4-210ENST00000585058 KRBA1A5PL33 1030 aa12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 PRICKLE3O43900 615 aaPredicted RBP12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 RPP30P78346 268 aaKnown RBP12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 SIX1Q15475 284 aaPredicted RBP12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 CD163Q86VB7 1156 aa12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 RNF128Q8TEB7 428 aa12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 RTP3Q9BQQ7 232 aa12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 ACTR10Q9NZ32 417 aa12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 TRAV27A0A087WT01 109 aa12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 SDC1P18827 310 aa12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 NTHL1P78549 312 aa12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 IL13RA1P78552 427 aa12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 SMAD2Q15796 467 aaKnown RBP12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 SLC22A6Q4U2R8 563 aa12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 TSSK4Q6SA08 328 aa12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 RANBP10Q6VN20 620 aa12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 LIPIQ6XZB0 460 aa12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 ABHD12BQ7Z5M8 362 aaPredicted RBP12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 GPATCH2Q9NW75 528 aa12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 POLHQ9Y253 713 aa12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 ATG4BQ9Y4P1 393 aa12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 ARFGEF2Q9Y6D5 1785 aa12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 EIF3FO00303 357 aaPredicted RBP12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 ZNF623O75123 536 aa12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 TPT1P13693 172 aaKnown RBP12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 HNRNPA2B1P22626 353 aaKnown RBP12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 HLA-DMAP28067 261 aa12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 EPHA4P54764 986 aa12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 BDH1Q02338 343 aa12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 ZNF252P-AS1Q0IIN9 211 aa12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 DCST2Q5T1A1 773 aa12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 CPZQ66K79 652 aa12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 GDPGP1Q6ZNW5 385 aa12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 VASH1Q7L8A9 365 aaPredicted RBP12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 MRPL41Q8IXM3 137 aaKnown RBP12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 SAP130Q9H0E3 1048 aa12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 OR10A5Q9H207 317 aa12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 OR10A2Q9H208 303 aa12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 ACKR4Q9NPB9 350 aa12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 DCAF13Q9NV06 445 aaKnown RBP12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 VAPAQ9P0L0 249 aa12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 PRAF2O60831 178 aa12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 HMGN2P05204 90 aaKnown RBP12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 FAM69AQ5T7M9 428 aa12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 PPP1R35Q8TAP8 253 aa12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 SLC7A13Q8TCU3 470 aa12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 ZFP90Q8TF47 636 aa12.47□□□□□ -0.41
RAB11FIP4-210ENST00000585058 RSC1A1Q92681 617 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms