RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 SERHL2Q9H4I8 314 aa13.91□□□□□ -0.18
CDK5RAP3-236ENST00000584991 TRIM45Q9H8W5 580 aaPredicted RBP13.91□□□□□ -0.18
CDK5RAP3-236ENST00000584991 EXOSC4Q9NPD3 245 aaKnown RBP13.91□□□□□ -0.18
CDK5RAP3-236ENST00000584991 FGF21Q9NSA1 209 aa13.91□□□□□ -0.18
CDK5RAP3-236ENST00000584991 CUTCQ9NTM9 273 aa13.91□□□□□ -0.18
CDK5RAP3-236ENST00000584991 ZCCHC3Q9NUD5 404 aaKnown RBP13.91□□□□□ -0.18
CDK5RAP3-236ENST00000584991 DNAJC27Q9NZQ0 273 aa13.91□□□□□ -0.18
CDK5RAP3-236ENST00000584991 HCN3Q9P1Z3 774 aa13.91□□□□□ -0.18
CDK5RAP3-236ENST00000584991 SERTAD3Q9UJW9 196 aa13.91□□□□□ -0.18
CDK5RAP3-236ENST00000584991 ENTPD4Q9Y227 616 aa13.91□□□□□ -0.18
CDK5RAP3-236ENST00000584991 FAM227AF5H4B4 570 aa13.91□□□□□ -0.18
CDK5RAP3-236ENST00000584991 NTN3O00634 580 aaPredicted RBP13.91□□□□□ -0.18
CDK5RAP3-236ENST00000584991 PRODHO43272 600 aa13.91□□□□□ -0.18
CDK5RAP3-236ENST00000584991 FHP07954 510 aa13.91□□□□□ -0.18
CDK5RAP3-236ENST00000584991 HBQ1P09105 142 aa13.91□□□□□ -0.18
CDK5RAP3-236ENST00000584991 MSL3P1P0C860 447 aa13.91□□□□□ -0.18
CDK5RAP3-236ENST00000584991 ACP2P11117 423 aa13.91□□□□□ -0.18
CDK5RAP3-236ENST00000584991 MMP11P24347 488 aa13.91□□□□□ -0.18
CDK5RAP3-236ENST00000584991 ACP1P24666 158 aa13.91□□□□□ -0.18
CDK5RAP3-236ENST00000584991 CASP3P42574 277 aa13.91□□□□□ -0.18
CDK5RAP3-236ENST00000584991 NCBP2P52298 156 aaKnown RBP eCLIP13.91□□□□□ -0.186e-7■■■■□ 23.5
CDK5RAP3-236ENST00000584991 WNT4P56705 351 aa13.91□□□□□ -0.18
CDK5RAP3-236ENST00000584991 RAB38P57729 211 aa13.91□□□□□ -0.18
CDK5RAP3-236ENST00000584991 PSPHP78330 225 aa13.91□□□□□ -0.18
CDK5RAP3-236ENST00000584991 PIN1Q13526 163 aaPredicted RBP13.91□□□□□ -0.18
CDK5RAP3-236ENST00000584991 GINS1Q14691 196 aa13.91□□□□□ -0.18
CDK5RAP3-236ENST00000584991 FAM214AQ32MH5 1076 aa13.91□□□□□ -0.18
CDK5RAP3-236ENST00000584991 XKRXQ6PP77 449 aa13.91□□□□□ -0.18
CDK5RAP3-236ENST00000584991 TTLL10Q6ZVT0 673 aa13.91□□□□□ -0.18
CDK5RAP3-236ENST00000584991 ZER1Q7Z7L7 766 aa13.91□□□□□ -0.18
CDK5RAP3-236ENST00000584991 OR4N5Q8IXE1 308 aa13.91□□□□□ -0.18
CDK5RAP3-236ENST00000584991 CCDC116Q8IYX3 515 aa13.91□□□□□ -0.18
CDK5RAP3-236ENST00000584991 GPR135Q8IZ08 494 aa13.91□□□□□ -0.18
CDK5RAP3-236ENST00000584991 TMEM52Q8NDY8 209 aa13.91□□□□□ -0.18
CDK5RAP3-236ENST00000584991 VANGL1Q8TAA9 524 aaPredicted RBP13.91□□□□□ -0.18
CDK5RAP3-236ENST00000584991 GNPDA2Q8TDQ7 276 aa13.91□□□□□ -0.18
CDK5RAP3-236ENST00000584991 AP3S1Q92572 193 aa13.91□□□□□ -0.18
CDK5RAP3-236ENST00000584991 TEX12Q9BXU0 123 aa13.91□□□□□ -0.18
CDK5RAP3-236ENST00000584991 HOXD1Q9GZZ0 328 aa13.91□□□□□ -0.18
CDK5RAP3-236ENST00000584991 TMEM9BQ9NQ34 198 aa13.91□□□□□ -0.18
CDK5RAP3-236ENST00000584991 SEMA4GQ9NTN9 838 aa13.91□□□□□ -0.18
CDK5RAP3-236ENST00000584991 GIMAP4Q9NUV9 329 aa13.91□□□□□ -0.18
CDK5RAP3-236ENST00000584991 EXOSC1Q9Y3B2 195 aaKnown RBP13.91□□□□□ -0.18
CDK5RAP3-236ENST00000584991 ZNF780BQ9Y6R6 833 aa13.91□□□□□ -0.18
CDK5RAP3-236ENST00000584991 PRAMEF27A3QJZ7 478 aa13.9□□□□□ -0.18
CDK5RAP3-236ENST00000584991 D6RAR5 112 aa13.9□□□□□ -0.18
CDK5RAP3-236ENST00000584991 CYR61O00622 381 aa13.9□□□□□ -0.18
CDK5RAP3-236ENST00000584991 TLX2O43763 284 aaPredicted RBP13.9□□□□□ -0.18
CDK5RAP3-236ENST00000584991 SOX14O95416 240 aa13.9□□□□□ -0.18
CDK5RAP3-236ENST00000584991 TNNI3P19429 210 aa13.9□□□□□ -0.18
CDK5RAP3-236ENST00000584991 CSNK2A2P19784 350 aaPredicted RBP13.9□□□□□ -0.18
CDK5RAP3-236ENST00000584991 PTBP1P26599 531 aaKnown RBP eCLIP13.9□□□□□ -0.18
CDK5RAP3-236ENST00000584991 FGF9P31371 208 aaPredicted RBP13.9□□□□□ -0.18
CDK5RAP3-236ENST00000584991 PTGER1P34995 402 aa13.9□□□□□ -0.18
CDK5RAP3-236ENST00000584991 RPS5P46782 204 aaKnown RBP13.9□□□□□ -0.18
CDK5RAP3-236ENST00000584991 AVPR1BP47901 424 aa13.9□□□□□ -0.18
CDK5RAP3-236ENST00000584991 SLC9A3P48764 834 aa13.9□□□□□ -0.18
CDK5RAP3-236ENST00000584991 PRR5P85299 388 aa13.9□□□□□ -0.18
CDK5RAP3-236ENST00000584991 MAT1AQ00266 395 aaKnown RBP13.9□□□□□ -0.18
CDK5RAP3-236ENST00000584991 SCN1BQ07699 218 aa13.9□□□□□ -0.18
CDK5RAP3-236ENST00000584991 LARS2Q15031 903 aaKnown RBP13.9□□□□□ -0.18
CDK5RAP3-236ENST00000584991 CEBPEQ15744 281 aa13.9□□□□□ -0.18
CDK5RAP3-236ENST00000584991 CLPPQ16740 277 aaPredicted RBP13.9□□□□□ -0.18
CDK5RAP3-236ENST00000584991 PHF19Q5T6S3 580 aa13.9□□□□□ -0.18
CDK5RAP3-236ENST00000584991 LAPTM4BQ86VI4 370 aa13.9□□□□□ -0.18
CDK5RAP3-236ENST00000584991 SLITRK4Q8IW52 837 aa13.9□□□□□ -0.18
CDK5RAP3-236ENST00000584991 GDPD1Q8N9F7 314 aa13.9□□□□□ -0.18
CDK5RAP3-236ENST00000584991 OR4K14Q8NGD5 310 aa13.9□□□□□ -0.18
CDK5RAP3-236ENST00000584991 OR52I1Q8NGK6 324 aa13.9□□□□□ -0.18
CDK5RAP3-236ENST00000584991 TMEM163Q8TC26 289 aa13.9□□□□□ -0.18
CDK5RAP3-236ENST00000584991 ZNF681Q96N22 645 aa13.9□□□□□ -0.18
CDK5RAP3-236ENST00000584991 ZNF582Q96NG8 517 aaPredicted RBP13.9□□□□□ -0.18
CDK5RAP3-236ENST00000584991 SLC38A2Q96QD8 506 aa13.9□□□□□ -0.18
CDK5RAP3-236ENST00000584991 KCNS3Q9BQ31 491 aa13.9□□□□□ -0.18
CDK5RAP3-236ENST00000584991 ENAMQ9NRM1 1142 aa13.9□□□□□ -0.18
CDK5RAP3-236ENST00000584991 MAN2C1Q9NTJ4 1040 aa13.9□□□□□ -0.18
CDK5RAP3-236ENST00000584991 MED17Q9NVC6 651 aa13.9□□□□□ -0.18
CDK5RAP3-236ENST00000584991 TVP23BQ9NYZ1 205 aa13.9□□□□□ -0.18
CDK5RAP3-236ENST00000584991 TRPC4Q9UBN4 977 aa13.9□□□□□ -0.18
CDK5RAP3-236ENST00000584991 CLEC2DQ9UHP7 191 aa13.9□□□□□ -0.18
CDK5RAP3-236ENST00000584991 CMAHPQ9Y471 501 aa13.9□□□□□ -0.18
CDK5RAP3-236ENST00000584991 LDB3O75112 727 aa13.89□□□□□ -0.19
CDK5RAP3-236ENST00000584991 GP1BAP07359 652 aa13.89□□□□□ -0.19
CDK5RAP3-236ENST00000584991 ATXN8OSP0DMR3 200 aa13.89□□□□□ -0.19
CDK5RAP3-236ENST00000584991 ALAS2P22557 587 aa13.89□□□□□ -0.19
CDK5RAP3-236ENST00000584991 ACY1Q03154 408 aa13.89□□□□□ -0.19
CDK5RAP3-236ENST00000584991 TSPAN31Q12999 210 aa13.89□□□□□ -0.19
CDK5RAP3-236ENST00000584991 MINDY4Q4G0A6 757 aa13.89□□□□□ -0.19
CDK5RAP3-236ENST00000584991 CCDC92Q53HC0 331 aaPredicted RBP13.89□□□□□ -0.19
CDK5RAP3-236ENST00000584991 SLC27A4Q6P1M0 643 aa13.89□□□□□ -0.19
CDK5RAP3-236ENST00000584991 RBM45Q8IUH3 476 aaKnown RBP13.89□□□□□ -0.19
CDK5RAP3-236ENST00000584991 NAXDQ8IW45 347 aa13.89□□□□□ -0.19
CDK5RAP3-236ENST00000584991 UBQLNLQ8IYU4 475 aa13.89□□□□□ -0.19
CDK5RAP3-236ENST00000584991 ASB15Q8WXK1 588 aa13.89□□□□□ -0.19
CDK5RAP3-236ENST00000584991 RFKQ969G6 155 aa13.89□□□□□ -0.19
CDK5RAP3-236ENST00000584991 PEX11GQ96HA9 241 aa13.89□□□□□ -0.19
CDK5RAP3-236ENST00000584991 PRRX2Q99811 253 aa13.89□□□□□ -0.19
CDK5RAP3-236ENST00000584991 BARHL1Q9BZE3 327 aa13.89□□□□□ -0.19
CDK5RAP3-236ENST00000584991 FAM86C1Q9NVL1 165 aa13.89□□□□□ -0.19
CDK5RAP3-236ENST00000584991 TXNL4BQ9NX01 149 aaKnown RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms