RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 SERINC4A6NH21 518 aa14.68□□□□□ -0.06
ERBB2-222ENST00000584908 KDM4EB2RXH2 506 aaPredicted RBP14.68□□□□□ -0.06
ERBB2-222ENST00000584908 PRSS44E7EML9 344 aa14.68□□□□□ -0.06
ERBB2-222ENST00000584908 HCRTR2O43614 444 aa14.68□□□□□ -0.06
ERBB2-222ENST00000584908 EIF4E2O60573 245 aaKnown RBP14.68□□□□□ -0.06
ERBB2-222ENST00000584908 DNAJA2O60884 412 aa14.68□□□□□ -0.06
ERBB2-222ENST00000584908 TNFRSF21O75509 655 aa14.68□□□□□ -0.06
ERBB2-222ENST00000584908 LINGO3P0C6S8 592 aa14.68□□□□□ -0.06
ERBB2-222ENST00000584908 CAPN3P20807 821 aa14.68□□□□□ -0.06
ERBB2-222ENST00000584908 PSMA4P25789 261 aaKnown RBP14.68□□□□□ -0.06
ERBB2-222ENST00000584908 HTR1EP28566 365 aa14.68□□□□□ -0.06
ERBB2-222ENST00000584908 P2RX1P51575 399 aa14.68□□□□□ -0.06
ERBB2-222ENST00000584908 GPR68Q15743 365 aa14.68□□□□□ -0.06
ERBB2-222ENST00000584908 GTDC1Q4AE62 458 aa14.68□□□□□ -0.06
ERBB2-222ENST00000584908 PDZK1Q5T2W1 519 aa14.68□□□□□ -0.06
ERBB2-222ENST00000584908 RAET1LQ5VY80 246 aa14.68□□□□□ -0.06
ERBB2-222ENST00000584908 CGB2Q6NT52 195 aa14.68□□□□□ -0.06
ERBB2-222ENST00000584908 SLC2A7Q6PXP3 512 aa14.68□□□□□ -0.06
ERBB2-222ENST00000584908 CBLN3Q6UW01 205 aa14.68□□□□□ -0.06
ERBB2-222ENST00000584908 DNAJC14Q6Y2X3 702 aaPredicted RBP14.68□□□□□ -0.06
ERBB2-222ENST00000584908 LRRC74BQ6ZQY2 392 aa14.68□□□□□ -0.06
ERBB2-222ENST00000584908 CCDC71Q8IV32 467 aaPredicted RBP14.68□□□□□ -0.06
ERBB2-222ENST00000584908 ACBD4Q8NC06 268 aa14.68□□□□□ -0.06
ERBB2-222ENST00000584908 TOR1AIP2Q8NFQ8 470 aa14.68□□□□□ -0.06
ERBB2-222ENST00000584908 ARSGQ96EG1 525 aa14.68□□□□□ -0.06
ERBB2-222ENST00000584908 KLHDC3Q9BQ90 382 aa14.68□□□□□ -0.06
ERBB2-222ENST00000584908 TUBA1CQ9BQE3 449 aa14.68□□□□□ -0.06
ERBB2-222ENST00000584908 SLC38A1Q9H2H9 487 aa14.68□□□□□ -0.06
ERBB2-222ENST00000584908 CHST11Q9NPF2 352 aa14.68□□□□□ -0.06
ERBB2-222ENST00000584908 FGFR1OP2Q9NVK5 253 aa14.68□□□□□ -0.06
ERBB2-222ENST00000584908 L3MBTL1Q9Y468 752 aa14.68□□□□□ -0.06
ERBB2-222ENST00000584908 PCDHB14Q9Y5E9 798 aa14.68□□□□□ -0.06
ERBB2-222ENST00000584908 AP4B1Q9Y6B7 739 aa14.68□□□□□ -0.06
ERBB2-222ENST00000584908 PKDREJQ9NTG1 2253 aa14.68□□□□□ -0.06
ERBB2-222ENST00000584908 CENPVL1A0A0U1RR11 272 aa14.67□□□□□ -0.06
ERBB2-222ENST00000584908 HSPB2A8KAH6 182 aa14.67□□□□□ -0.06
ERBB2-222ENST00000584908 ETV2O00321 342 aaPredicted RBP14.67□□□□□ -0.06
ERBB2-222ENST00000584908 ZNF264O43296 627 aa14.67□□□□□ -0.06
ERBB2-222ENST00000584908 OIP5O43482 229 aa14.67□□□□□ -0.06
ERBB2-222ENST00000584908 H6PDO95479 791 aa14.67□□□□□ -0.06
ERBB2-222ENST00000584908 ANP32DO95626 131 aa14.67□□□□□ -0.06
ERBB2-222ENST00000584908 TROVE2P10155 538 aaKnown RBP eCLIP14.67□□□□□ -0.06
ERBB2-222ENST00000584908 COL8A1P27658 744 aa14.67□□□□□ -0.06
ERBB2-222ENST00000584908 MDH1P40925 334 aaKnown RBP14.67□□□□□ -0.06
ERBB2-222ENST00000584908 ZNF41P51814 821 aaPredicted RBP14.67□□□□□ -0.06
ERBB2-222ENST00000584908 CLDN15P56746 228 aa14.67□□□□□ -0.06
ERBB2-222ENST00000584908 TFF3Q07654 80 aa14.67□□□□□ -0.06
ERBB2-222ENST00000584908 FGFBP1Q14512 234 aa14.67□□□□□ -0.06
ERBB2-222ENST00000584908 MAPK11Q15759 364 aa14.67□□□□□ -0.06
ERBB2-222ENST00000584908 HSPB2Q16082 182 aa14.67□□□□□ -0.06
ERBB2-222ENST00000584908 MAPK14Q16539 360 aa14.67□□□□□ -0.06
ERBB2-222ENST00000584908 SYPL1Q16563 259 aa14.67□□□□□ -0.06
ERBB2-222ENST00000584908 AGKQ53H12 422 aa14.67□□□□□ -0.06
ERBB2-222ENST00000584908 C6orf10Q5SRN2 563 aa14.67□□□□□ -0.06
ERBB2-222ENST00000584908 HIST2H2BCQ6DN03 193 aa14.67□□□□□ -0.06
ERBB2-222ENST00000584908 OLIG3Q7RTU3 272 aa14.67□□□□□ -0.06
ERBB2-222ENST00000584908 ZNF619Q8N2I2 560 aa14.67□□□□□ -0.06
ERBB2-222ENST00000584908 FAM71CQ8NEG0 241 aa14.67□□□□□ -0.06
ERBB2-222ENST00000584908 OR10Q1Q8NGQ4 319 aa14.67□□□□□ -0.06
ERBB2-222ENST00000584908 TSPEARQ8WU66 669 aa14.67□□□□□ -0.06
ERBB2-222ENST00000584908 SH3YL1Q96HL8 342 aaPredicted RBP14.67□□□□□ -0.06
ERBB2-222ENST00000584908 THUMPD1Q9NXG2 353 aaKnown RBP14.67□□□□□ -0.06
ERBB2-222ENST00000584908 CLCF1Q9UBD9 225 aa14.67□□□□□ -0.06
ERBB2-222ENST00000584908 VDAC3Q9Y277 283 aa14.67□□□□□ -0.06
ERBB2-222ENST00000584908 CARD8Q9Y2G2 431 aa14.67□□□□□ -0.06
ERBB2-222ENST00000584908 NAV2Q8IVL1 2488 aa14.67□□□□□ -0.06
ERBB2-222ENST00000584908 TRBV5-3A0A0A0MS03 114 aa14.66□□□□□ -0.06
ERBB2-222ENST00000584908 A0A1W2PP18 115 aa14.66□□□□□ -0.06
ERBB2-222ENST00000584908 H0Y3Z8 333 aa14.66□□□□□ -0.06
ERBB2-222ENST00000584908 GTPBP1O00178 669 aaKnown RBP14.66□□□□□ -0.06
ERBB2-222ENST00000584908 NR5A2O00482 541 aa14.66□□□□□ -0.06
ERBB2-222ENST00000584908 CHRM4P08173 479 aa14.66□□□□□ -0.06
ERBB2-222ENST00000584908 UBL4AP11441 157 aa14.66□□□□□ -0.06
ERBB2-222ENST00000584908 BMP2P12643 396 aa14.66□□□□□ -0.06
ERBB2-222ENST00000584908 CD1EP15812 388 aa14.66□□□□□ -0.06
ERBB2-222ENST00000584908 NCF2P19878 526 aaPredicted RBP14.66□□□□□ -0.06
ERBB2-222ENST00000584908 POU3F2P20265 443 aaPredicted RBP14.66□□□□□ -0.06
ERBB2-222ENST00000584908 RPS4Y1P22090 263 aaKnown RBP14.66□□□□□ -0.06
ERBB2-222ENST00000584908 TCEA1P23193 301 aaKnown RBP14.66□□□□□ -0.06
ERBB2-222ENST00000584908 ADH6P28332 368 aa14.66□□□□□ -0.06
ERBB2-222ENST00000584908 GRNP28799 593 aaKnown RBP14.66□□□□□ -0.06
ERBB2-222ENST00000584908 EIF1P41567 113 aaKnown RBP14.66□□□□□ -0.06
ERBB2-222ENST00000584908 CHRNEQ04844 493 aa14.66□□□□□ -0.06
ERBB2-222ENST00000584908 FADDQ13158 208 aa14.66□□□□□ -0.06
ERBB2-222ENST00000584908 SKP2Q13309 424 aa14.66□□□□□ -0.06
ERBB2-222ENST00000584908 PAGE3Q5JUK9 113 aa14.66□□□□□ -0.06
ERBB2-222ENST00000584908 SP5Q6BEB4 398 aaPredicted RBP14.66□□□□□ -0.06
ERBB2-222ENST00000584908 POMZP3Q6PJE2 187 aa14.66□□□□□ -0.06
ERBB2-222ENST00000584908 MSRB3Q8IXL7 192 aa14.66□□□□□ -0.06
ERBB2-222ENST00000584908 ANKFN1Q8N957 763 aa14.66□□□□□ -0.06
ERBB2-222ENST00000584908 NAXEQ8NCW5 288 aa14.66□□□□□ -0.06
ERBB2-222ENST00000584908 TNIP2Q8NFZ5 429 aa14.66□□□□□ -0.06
ERBB2-222ENST00000584908 OR5W2Q8NH69 310 aa14.66□□□□□ -0.06
ERBB2-222ENST00000584908 PNPT1Q8TCS8 783 aaKnown RBP14.66□□□□□ -0.06
ERBB2-222ENST00000584908 GPR119Q8TDV5 335 aa14.66□□□□□ -0.06
ERBB2-222ENST00000584908 ZG16BQ96DA0 208 aa14.66□□□□□ -0.06
ERBB2-222ENST00000584908 AURKBQ96GD4 344 aaPredicted RBP14.66□□□□□ -0.06
ERBB2-222ENST00000584908 ZNF317Q96PQ6 595 aaPredicted RBP14.66□□□□□ -0.06
ERBB2-222ENST00000584908 TRIB1Q96RU8 372 aa14.66□□□□□ -0.06
ERBB2-222ENST00000584908 NPAS1Q99742 590 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms