RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 ADGRG7Q96K78 797 aa11.84□□□□□ -0.51
ERBB2-220ENST00000584684 SLC35G5Q96KT7 338 aa11.84□□□□□ -0.51
ERBB2-220ENST00000584684 CCDC115Q96NT0 180 aa11.84□□□□□ -0.51
ERBB2-220ENST00000584684 SDF2Q99470 211 aa11.84□□□□□ -0.51
ERBB2-220ENST00000584684 PINK1Q9BXM7 581 aa11.84□□□□□ -0.51
ERBB2-220ENST00000584684 ZNF350Q9GZX5 532 aa11.84□□□□□ -0.51
ERBB2-220ENST00000584684 POLE3Q9NRF9 147 aa11.84□□□□□ -0.51
ERBB2-220ENST00000584684 BTNL2Q9UIR0 455 aa11.84□□□□□ -0.51
ERBB2-220ENST00000584684 ICAM5Q9UMF0 924 aa11.84□□□□□ -0.51
ERBB2-220ENST00000584684 ABCA4P78363 2273 aa11.84□□□□□ -0.51
ERBB2-220ENST00000584684 AKAP6Q13023 2319 aa11.83□□□□□ -0.51
ERBB2-220ENST00000584684 TUBAL3A6NHL2 446 aa11.83□□□□□ -0.52
ERBB2-220ENST00000584684 A6NNC1 897 aa11.83□□□□□ -0.52
ERBB2-220ENST00000584684 A8MXE2 369 aa11.83□□□□□ -0.52
ERBB2-220ENST00000584684 ETV2O00321 342 aaPredicted RBP11.83□□□□□ -0.52
ERBB2-220ENST00000584684 ADAMDEC1O15204 470 aa11.83□□□□□ -0.52
ERBB2-220ENST00000584684 MATN1P21941 496 aa11.83□□□□□ -0.52
ERBB2-220ENST00000584684 ME2P23368 584 aa11.83□□□□□ -0.52
ERBB2-220ENST00000584684 ADH6P28332 368 aa11.83□□□□□ -0.52
ERBB2-220ENST00000584684 EPHA3P29320 983 aa11.83□□□□□ -0.52
ERBB2-220ENST00000584684 P2RX1P51575 399 aa11.83□□□□□ -0.52
ERBB2-220ENST00000584684 AGFG1P52594 562 aaKnown RBP11.83□□□□□ -0.52
ERBB2-220ENST00000584684 RAC1P63000 192 aa11.83□□□□□ -0.52
ERBB2-220ENST00000584684 TXNL4AP83876 142 aaKnown RBP11.83□□□□□ -0.52
ERBB2-220ENST00000584684 DAZAP2Q15038 168 aaPredicted RBP11.83□□□□□ -0.52
ERBB2-220ENST00000584684 PON3Q15166 354 aa11.83□□□□□ -0.52
ERBB2-220ENST00000584684 ZNF141Q15928 474 aa11.83□□□□□ -0.52
ERBB2-220ENST00000584684 ARHGAP11BQ3KRB8 267 aa11.83□□□□□ -0.52
ERBB2-220ENST00000584684 AGBL2Q5U5Z8 902 aa11.83□□□□□ -0.52
ERBB2-220ENST00000584684 PLXDC2Q6UX71 529 aa11.83□□□□□ -0.52
ERBB2-220ENST00000584684 ESPNLQ6ZVH7 1005 aa11.83□□□□□ -0.52
ERBB2-220ENST00000584684 P4HA3Q7Z4N8 544 aa11.83□□□□□ -0.52
ERBB2-220ENST00000584684 WDR75Q8IWA0 830 aaKnown RBP11.83□□□□□ -0.52
ERBB2-220ENST00000584684 ZZZ3Q8IYH5 903 aa11.83□□□□□ -0.52
ERBB2-220ENST00000584684 GLB1L3Q8NCI6 653 aaPredicted RBP11.83□□□□□ -0.52
ERBB2-220ENST00000584684 FNDC9Q8TBE3 224 aa11.83□□□□□ -0.52
ERBB2-220ENST00000584684 PHOSPHO1Q8TCT1 267 aa11.83□□□□□ -0.52
ERBB2-220ENST00000584684 MGARPQ8TDB4 240 aa11.83□□□□□ -0.52
ERBB2-220ENST00000584684 FIG4Q92562 907 aa11.83□□□□□ -0.52
ERBB2-220ENST00000584684 ZBTB9Q96C00 473 aa11.83□□□□□ -0.52
ERBB2-220ENST00000584684 ARSGQ96EG1 525 aa11.83□□□□□ -0.52
ERBB2-220ENST00000584684 SH3YL1Q96HL8 342 aaPredicted RBP11.83□□□□□ -0.52
ERBB2-220ENST00000584684 TEX37Q96LM6 180 aa11.83□□□□□ -0.52
ERBB2-220ENST00000584684 RNF145Q96MT1 663 aa11.83□□□□□ -0.52
ERBB2-220ENST00000584684 RBM24Q9BX46 236 aaKnown RBP11.83□□□□□ -0.52
ERBB2-220ENST00000584684 MANSC1Q9H8J5 431 aa11.83□□□□□ -0.52
ERBB2-220ENST00000584684 GALNT8Q9NY28 637 aa11.83□□□□□ -0.52
ERBB2-220ENST00000584684 DTNAQ9Y4J8 743 aa11.83□□□□□ -0.52
ERBB2-220ENST00000584684 GPR45Q9Y5Y3 372 aa11.83□□□□□ -0.52
ERBB2-220ENST00000584684 SHISA8B8ZZ34 492 aa11.82□□□□□ -0.52
ERBB2-220ENST00000584684 GMFGO60234 142 aa11.82□□□□□ -0.52
ERBB2-220ENST00000584684 KIAA0513O60268 411 aa11.82□□□□□ -0.52
ERBB2-220ENST00000584684 EIF4E2O60573 245 aaKnown RBP11.82□□□□□ -0.52
ERBB2-220ENST00000584684 DNAJA2O60884 412 aa11.82□□□□□ -0.52
ERBB2-220ENST00000584684 STX11O75558 287 aa11.82□□□□□ -0.52
ERBB2-220ENST00000584684 NTN1O95631 604 aa11.82□□□□□ -0.52
ERBB2-220ENST00000584684 CD8BP10966 210 aa11.82□□□□□ -0.52
ERBB2-220ENST00000584684 IDO1P14902 403 aa11.82□□□□□ -0.52
ERBB2-220ENST00000584684 S100A3P33764 101 aa11.82□□□□□ -0.52
ERBB2-220ENST00000584684 CPA2P48052 419 aa11.82□□□□□ -0.52
ERBB2-220ENST00000584684 KHKP50053 298 aa11.82□□□□□ -0.52
ERBB2-220ENST00000584684 SLC25A53Q5H9E4 307 aa11.82□□□□□ -0.52
ERBB2-220ENST00000584684 CBLN3Q6UW01 205 aa11.82□□□□□ -0.52
ERBB2-220ENST00000584684 ANKRD46Q86W74 232 aa11.82□□□□□ -0.52
ERBB2-220ENST00000584684 POC1BQ8TC44 478 aa11.82□□□□□ -0.52
ERBB2-220ENST00000584684 PIWIL2Q8TC59 973 aaKnown RBP11.82□□□□□ -0.52
ERBB2-220ENST00000584684 SMPDL3BQ92485 455 aa11.82□□□□□ -0.52
ERBB2-220ENST00000584684 STARD4Q96DR4 205 aa11.82□□□□□ -0.52
ERBB2-220ENST00000584684 ZNF845Q96IR2 970 aaPredicted RBP11.82□□□□□ -0.52
ERBB2-220ENST00000584684 NPAS1Q99742 590 aa11.82□□□□□ -0.52
ERBB2-220ENST00000584684 KLHDC3Q9BQ90 382 aa11.82□□□□□ -0.52
ERBB2-220ENST00000584684 OR51I1Q9H343 314 aa11.82□□□□□ -0.52
ERBB2-220ENST00000584684 WDR55Q9H6Y2 383 aaPredicted RBP11.82□□□□□ -0.52
ERBB2-220ENST00000584684 RASSF1Q9NS23 344 aa11.82□□□□□ -0.52
ERBB2-220ENST00000584684 EXD2Q9NVH0 621 aa11.82□□□□□ -0.52
ERBB2-220ENST00000584684 MARCOQ9UEW3 520 aaPredicted RBP11.82□□□□□ -0.52
ERBB2-220ENST00000584684 GPC6Q9Y625 555 aaPredicted RBP11.82□□□□□ -0.52
ERBB2-220ENST00000584684 NPIPA5A0A0B4J1W7 369 aa11.81□□□□□ -0.52
ERBB2-220ENST00000584684 SERINC4A6NH21 518 aa11.81□□□□□ -0.52
ERBB2-220ENST00000584684 NPIPA7E9PJI5 369 aa11.81□□□□□ -0.52
ERBB2-220ENST00000584684 EIF1AYO14602 144 aaKnown RBP11.81□□□□□ -0.52
ERBB2-220ENST00000584684 ZNF264O43296 627 aa11.81□□□□□ -0.52
ERBB2-220ENST00000584684 OIP5O43482 229 aa11.81□□□□□ -0.52
ERBB2-220ENST00000584684 CGAP01215 116 aa11.81□□□□□ -0.52
ERBB2-220ENST00000584684 PGRP06401 933 aa11.81□□□□□ -0.52
ERBB2-220ENST00000584684 NPIPA8P0DM63 369 aa11.81□□□□□ -0.52
ERBB2-220ENST00000584684 UBL4AP11441 157 aa11.81□□□□□ -0.52
ERBB2-220ENST00000584684 EPXP11678 715 aa11.81□□□□□ -0.52
ERBB2-220ENST00000584684 NID1P14543 1247 aa11.81□□□□□ -0.52
ERBB2-220ENST00000584684 MAGEA8P43361 318 aa11.81□□□□□ -0.52
ERBB2-220ENST00000584684 KIR2DL2P43627 348 aaPredicted RBP11.81□□□□□ -0.52
ERBB2-220ENST00000584684 UFM1P61960 85 aa11.81□□□□□ -0.52
ERBB2-220ENST00000584684 FUT5Q11128 374 aa11.81□□□□□ -0.52
ERBB2-220ENST00000584684 FOXF1Q12946 379 aa11.81□□□□□ -0.52
ERBB2-220ENST00000584684 SKP2Q13309 424 aa11.81□□□□□ -0.52
ERBB2-220ENST00000584684 SNTB1Q13884 538 aaKnown RBP11.81□□□□□ -0.52
ERBB2-220ENST00000584684 TESK1Q15569 626 aa11.81□□□□□ -0.52
ERBB2-220ENST00000584684 PDCD4Q53EL6 469 aaKnown RBP11.81□□□□□ -0.52
ERBB2-220ENST00000584684 PDZK1Q5T2W1 519 aa11.81□□□□□ -0.52
ERBB2-220ENST00000584684 ATAD3BQ5T9A4 648 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms