RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 KLHL17Q6TDP4 642 aa12.43□□□□□ -0.42
CSNK1D-224ENST00000584672 ZAR1Q86SH2 424 aa12.43□□□□□ -0.42
CSNK1D-224ENST00000584672 TRABD2AQ86V40 505 aa12.43□□□□□ -0.42
CSNK1D-224ENST00000584672 SLC35F6Q8N357 371 aa12.43□□□□□ -0.42
CSNK1D-224ENST00000584672 SEMA6DQ8NFY4 1073 aa12.43□□□□□ -0.42
CSNK1D-224ENST00000584672 OR4C3Q8NH37 302 aa12.43□□□□□ -0.42
CSNK1D-224ENST00000584672 FBXO30Q8TB52 745 aa12.43□□□□□ -0.42
CSNK1D-224ENST00000584672 GCDHQ92947 438 aaPredicted RBP12.43□□□□□ -0.42
CSNK1D-224ENST00000584672 ZNF300Q96RE9 604 aaPredicted RBP12.43□□□□□ -0.42
CSNK1D-224ENST00000584672 INPP5KQ9BT40 448 aa12.43□□□□□ -0.42
CSNK1D-224ENST00000584672 EBPLQ9BY08 206 aa12.43□□□□□ -0.42
CSNK1D-224ENST00000584672 COQ10BQ9H8M1 238 aa12.43□□□□□ -0.42
CSNK1D-224ENST00000584672 ANKZF1Q9H8Y5 726 aa12.43□□□□□ -0.42
CSNK1D-224ENST00000584672 DDX18Q9NVP1 670 aaKnown RBP12.43□□□□□ -0.42
CSNK1D-224ENST00000584672 MCM8Q9UJA3 840 aa12.43□□□□□ -0.42
CSNK1D-224ENST00000584672 PPP2R2CQ9Y2T4 447 aa12.43□□□□□ -0.42
CSNK1D-224ENST00000584672 SNX24Q9Y343 169 aa12.43□□□□□ -0.42
CSNK1D-224ENST00000584672 FKBP7Q9Y680 259 aa12.43□□□□□ -0.42
CSNK1D-224ENST00000584672 GOLGA8QA0A0J9YX86 632 aa12.42□□□□□ -0.42
CSNK1D-224ENST00000584672 C7orf72A4D263 438 aa12.42□□□□□ -0.42
CSNK1D-224ENST00000584672 GOLGA8OA6NCC3 632 aa12.42□□□□□ -0.42
CSNK1D-224ENST00000584672 GOLGA8NF8WBI6 632 aa12.42□□□□□ -0.42
CSNK1D-224ENST00000584672 GOLGA8RI6L899 631 aa12.42□□□□□ -0.42
CSNK1D-224ENST00000584672 NDUFS8O00217 210 aa12.42□□□□□ -0.42
CSNK1D-224ENST00000584672 UPK1AO00322 258 aa12.42□□□□□ -0.42
CSNK1D-224ENST00000584672 EFNA2O43921 213 aa12.42□□□□□ -0.42
CSNK1D-224ENST00000584672 KCNH1O95259 989 aa12.42□□□□□ -0.42
CSNK1D-224ENST00000584672 BMP4P12644 408 aa12.42□□□□□ -0.42
CSNK1D-224ENST00000584672 COX5AP20674 150 aa12.42□□□□□ -0.42
CSNK1D-224ENST00000584672 PTAFRP25105 342 aa12.42□□□□□ -0.42
CSNK1D-224ENST00000584672 DEFA6Q01524 100 aa12.42□□□□□ -0.42
CSNK1D-224ENST00000584672 ZNF544Q6NX49 715 aa12.42□□□□□ -0.42
CSNK1D-224ENST00000584672 C3orf62Q6ZUJ4 267 aa12.42□□□□□ -0.42
CSNK1D-224ENST00000584672 ZNF100Q8IYN0 542 aa12.42□□□□□ -0.42
CSNK1D-224ENST00000584672 SAMD14Q8IZD0 417 aaPredicted RBP12.42□□□□□ -0.42
CSNK1D-224ENST00000584672 ZNF433Q8N7K0 673 aaPredicted RBP12.42□□□□□ -0.42
CSNK1D-224ENST00000584672 FAM110BQ8TC76 370 aa12.42□□□□□ -0.42
CSNK1D-224ENST00000584672 GPR151Q8TDV0 419 aa12.42□□□□□ -0.42
CSNK1D-224ENST00000584672 C16orf78Q8WTQ4 265 aa12.42□□□□□ -0.42
CSNK1D-224ENST00000584672 VRK1Q99986 396 aaPredicted RBP12.42□□□□□ -0.42
CSNK1D-224ENST00000584672 PSD2Q9BQI7 771 aa12.42□□□□□ -0.42
CSNK1D-224ENST00000584672 MYNNQ9NPC7 610 aa12.42□□□□□ -0.42
CSNK1D-224ENST00000584672 VPS29Q9UBQ0 182 aa12.42□□□□□ -0.42
CSNK1D-224ENST00000584672 METRNQ9UJH8 293 aa12.42□□□□□ -0.42
CSNK1D-224ENST00000584672 ING1Q9UK53 422 aaPredicted RBP12.42□□□□□ -0.42
CSNK1D-224ENST00000584672 C19orf53Q9UNZ5 99 aaPredicted RBP12.42□□□□□ -0.42
CSNK1D-224ENST00000584672 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.42□□□□□ -0.42
CSNK1D-224ENST00000584672 A0A087WV62 115 aa12.41□□□□□ -0.42
CSNK1D-224ENST00000584672 NPIPA5A0A0B4J1W7 369 aa12.41□□□□□ -0.42
CSNK1D-224ENST00000584672 A0A1W2PNR3 127 aa12.41□□□□□ -0.42
CSNK1D-224ENST00000584672 CIB4A0PJX0 185 aa12.41□□□□□ -0.42
CSNK1D-224ENST00000584672 CCT8L1PA6NM43 557 aa12.41□□□□□ -0.42
CSNK1D-224ENST00000584672 ALG1L2C9J202 215 aa12.41□□□□□ -0.42
CSNK1D-224ENST00000584672 NPIPA7E9PJI5 369 aa12.41□□□□□ -0.42
CSNK1D-224ENST00000584672 SMAD9O15198 467 aaKnown RBP12.41□□□□□ -0.42
CSNK1D-224ENST00000584672 PGM3O95394 542 aa12.41□□□□□ -0.42
CSNK1D-224ENST00000584672 NPIPA8P0DM63 369 aa12.41□□□□□ -0.42
CSNK1D-224ENST00000584672 CDH13P55290 713 aa12.41□□□□□ -0.42
CSNK1D-224ENST00000584672 RASGEF1BQ0VAM2 473 aa12.41□□□□□ -0.42
CSNK1D-224ENST00000584672 MLC1Q15049 377 aa12.41□□□□□ -0.42
CSNK1D-224ENST00000584672 GGTA1PQ4G0N0 100 aa12.41□□□□□ -0.42
CSNK1D-224ENST00000584672 TECRLQ5HYJ1 363 aa12.41□□□□□ -0.42
CSNK1D-224ENST00000584672 MROH9Q5TGP6 573 aa12.41□□□□□ -0.42
CSNK1D-224ENST00000584672 PLD6Q8N2A8 252 aaKnown RBP12.41□□□□□ -0.42
CSNK1D-224ENST00000584672 UBE2J2Q8N2K1 259 aa12.41□□□□□ -0.42
CSNK1D-224ENST00000584672 GPR78Q96P69 363 aa12.41□□□□□ -0.42
CSNK1D-224ENST00000584672 LMF2Q9BU23 707 aaKnown RBP12.41□□□□□ -0.42
CSNK1D-224ENST00000584672 METTL17Q9H7H0 456 aaPredicted RBP12.41□□□□□ -0.42
CSNK1D-224ENST00000584672 BRF2Q9HAW0 419 aa12.41□□□□□ -0.42
CSNK1D-224ENST00000584672 NMRK1Q9NWW6 199 aa12.41□□□□□ -0.42
CSNK1D-224ENST00000584672 KLHL9Q9P2J3 617 aa12.41□□□□□ -0.42
CSNK1D-224ENST00000584672 SLC25A15Q9Y619 301 aa12.41□□□□□ -0.42
CSNK1D-224ENST00000584672 A0A096LPK6 155 aa12.4□□□□□ -0.42
CSNK1D-224ENST00000584672 MYO1GB0I1T2 1018 aa12.4□□□□□ -0.42
CSNK1D-224ENST00000584672 ATP6V1G2-DDX39BF2Z307 99 aa12.4□□□□□ -0.42
CSNK1D-224ENST00000584672 OR4F21O95013 312 aa12.4□□□□□ -0.42
CSNK1D-224ENST00000584672 KLHL2O95198 593 aa12.4□□□□□ -0.42
CSNK1D-224ENST00000584672 SLU7O95391 586 aaKnown RBP12.4□□□□□ -0.42
CSNK1D-224ENST00000584672 PSMG1O95456 288 aa12.4□□□□□ -0.42
CSNK1D-224ENST00000584672 NUDT14O95848 222 aa12.4□□□□□ -0.42
CSNK1D-224ENST00000584672 LINGO3P0C6S8 592 aa12.4□□□□□ -0.42
CSNK1D-224ENST00000584672 BTKQ06187 659 aa12.4□□□□□ -0.42
CSNK1D-224ENST00000584672 HEPACAMQ14CZ8 416 aa12.4□□□□□ -0.42
CSNK1D-224ENST00000584672 CD226Q15762 336 aa12.4□□□□□ -0.42
CSNK1D-224ENST00000584672 GLE1Q53GS7 698 aaKnown RBP12.4□□□□□ -0.42
CSNK1D-224ENST00000584672 KLC3Q6P597 504 aa12.4□□□□□ -0.42
CSNK1D-224ENST00000584672 P2RY8Q86VZ1 359 aa12.4□□□□□ -0.42
CSNK1D-224ENST00000584672 FBXO27Q8NI29 283 aa12.4□□□□□ -0.42
CSNK1D-224ENST00000584672 ACTRT2Q8TDY3 377 aa12.4□□□□□ -0.42
CSNK1D-224ENST00000584672 ZFP90Q8TF47 636 aa12.4□□□□□ -0.42
CSNK1D-224ENST00000584672 OTUB1Q96FW1 271 aaPredicted RBP12.4□□□□□ -0.42
CSNK1D-224ENST00000584672 APIPQ96GX9 242 aa12.4□□□□□ -0.42
CSNK1D-224ENST00000584672 VPS11Q9H270 941 aa12.4□□□□□ -0.42
CSNK1D-224ENST00000584672 DPH5Q9H2P9 285 aa12.4□□□□□ -0.42
CSNK1D-224ENST00000584672 GLIPR2Q9H4G4 154 aa12.4□□□□□ -0.42
CSNK1D-224ENST00000584672 BCO1Q9HAY6 547 aa12.4□□□□□ -0.42
CSNK1D-224ENST00000584672 C3orf14Q9HBI5 128 aa12.4□□□□□ -0.42
CSNK1D-224ENST00000584672 GP6Q9HCN6 339 aa12.4□□□□□ -0.42
CSNK1D-224ENST00000584672 NTMQ9P121 344 aa12.4□□□□□ -0.42
CSNK1D-224ENST00000584672 SNX12Q9UMY4 172 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms