RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 AAMDCQ9H7C9 122 aa5.67□□□□□ -1.5
PPP4R1-216ENST00000580283 OBP2BQ9NPH6 170 aa5.67□□□□□ -1.5
PPP4R1-216ENST00000580283 CCDC177Q9NQR7 707 aaPredicted RBP5.67□□□□□ -1.5
PPP4R1-216ENST00000580283 PRTFDC1Q9NRG1 225 aa5.67□□□□□ -1.5
PPP4R1-216ENST00000580283 HOMER3Q9NSC5 361 aa5.67□□□□□ -1.5
PPP4R1-216ENST00000580283 PSD3Q9NYI0 1048 aa5.67□□□□□ -1.5
PPP4R1-216ENST00000580283 CLCF1Q9UBD9 225 aa5.67□□□□□ -1.5
PPP4R1-216ENST00000580283 BOKQ9UMX3 212 aaPredicted RBP5.67□□□□□ -1.5
PPP4R1-216ENST00000580283 ZNF148Q9UQR1 794 aa5.67□□□□□ -1.5
PPP4R1-216ENST00000580283 LAMP3Q9UQV4 416 aa5.67□□□□□ -1.5
PPP4R1-216ENST00000580283 PDE10AQ9Y233 779 aa5.67□□□□□ -1.5
PPP4R1-216ENST00000580283 IKBKGQ9Y6K9 419 aa5.67□□□□□ -1.5
PPP4R1-216ENST00000580283 PLCE1Q9P212 2302 aa5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 IGHV4-30-2A0A087WSY4 118 aa5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 ZNF814B7Z6K7 855 aa5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 RHODO00212 210 aa5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 EIF3FO00303 357 aaPredicted RBP5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 HS3ST1O14792 307 aa5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 ZBTB14O43829 449 aa5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 SKAP2O75563 359 aaPredicted RBP5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 TRAPPC6AO75865 159 aa5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 CD8AP01732 235 aa5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 PEPDP12955 493 aa5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 ETS1P14921 441 aa5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 HNRNPH1P31943 449 aaKnown RBP5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 CPOXP36551 454 aa5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 CDKN1AP38936 164 aa5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 RPL21P46778 160 aaKnown RBP5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 STARP49675 285 aa5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 CCR8P51685 355 aa5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 FOXG1P55316 489 aaPredicted RBP5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 BTN3A2P78410 334 aa5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 CCZ1BP86790 482 aa5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 CCZ1P86791 482 aaPredicted RBP5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 PHKG1Q16816 387 aa5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 TMEM249Q2WGJ8 235 aa5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 FAM174BQ3ZCQ3 159 aa5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 TOR1AIP1Q5JTV8 583 aa5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 C6orf10Q5SRN2 563 aa5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 UGT3A1Q6NUS8 523 aa5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 BHLHB9Q6PI77 547 aa5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 SASS6Q6UVJ0 657 aa5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 TMEM64Q6YI46 380 aa5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 ZNF704Q6ZNC4 412 aaPredicted RBP5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 PIWIL4Q7Z3Z4 852 aaKnown RBP5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 DDIASQ8IXT1 998 aa5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 TC2NQ8N9U0 490 aa5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 DOK4Q8TEW6 326 aa5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 SPACA9Q96E40 222 aaPredicted RBP5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 SNF8Q96H20 258 aa5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 BPIFA3Q9BQP9 254 aa5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 MED18Q9BUE0 208 aa5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 OPN3Q9H1Y3 402 aaPredicted RBP5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 PIGMQ9H3S5 423 aa5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 CXorf56Q9H5V9 222 aa5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 EIF2B3Q9NR50 452 aaKnown RBP5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 ZNF226Q9NYT6 803 aa5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 CNIH4Q9P003 139 aa5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 FETUBQ9UGM5 382 aa5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 DHRS7Q9Y394 339 aa5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 CLCA3PQ9Y6N3 262 aa5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 KMT2CQ8NEZ4 4911 aaKnown RBP5.66□□□□□ -1.5
PPP4R1-216ENST00000580283 HEATR1Q9H583 2144 aaKnown RBP5.65□□□□□ -1.5
PPP4R1-216ENST00000580283 ARFGEF3Q5TH69 2177 aa5.65□□□□□ -1.5
PPP4R1-216ENST00000580283 A0A087WV62 115 aa5.65□□□□□ -1.5
PPP4R1-216ENST00000580283 TMEM272A0A1B0GTI8 110 aa5.65□□□□□ -1.5
PPP4R1-216ENST00000580283 MACROD2A1Z1Q3 448 aa5.65□□□□□ -1.5
PPP4R1-216ENST00000580283 C17orf105B2RV13 164 aa5.65□□□□□ -1.5
PPP4R1-216ENST00000580283 PSMD12O00232 456 aaPredicted RBP5.65□□□□□ -1.5
PPP4R1-216ENST00000580283 OR10H2O60403 315 aa5.65□□□□□ -1.5
PPP4R1-216ENST00000580283 CTNSO60931 367 aa5.65□□□□□ -1.5
PPP4R1-216ENST00000580283 LDB3O75112 727 aa5.65□□□□□ -1.5
PPP4R1-216ENST00000580283 AVILO75366 819 aa5.65□□□□□ -1.5
PPP4R1-216ENST00000580283 VAPBO95292 243 aa5.65□□□□□ -1.5
PPP4R1-216ENST00000580283 TNFRSF6BO95407 300 aa5.65□□□□□ -1.5
PPP4R1-216ENST00000580283 CLPSP04118 112 aa5.65□□□□□ -1.5
PPP4R1-216ENST00000580283 IFNA16P05015 189 aa5.65□□□□□ -1.5
PPP4R1-216ENST00000580283 IGFBP5P24593 272 aa5.65□□□□□ -1.5
PPP4R1-216ENST00000580283 PTPN6P29350 595 aa5.65□□□□□ -1.5
PPP4R1-216ENST00000580283 RPL22P35268 128 aaKnown RBP5.65□□□□□ -1.5
PPP4R1-216ENST00000580283 AHRP35869 848 aa5.65□□□□□ -1.5
PPP4R1-216ENST00000580283 CLDN15P56746 228 aa5.65□□□□□ -1.5
PPP4R1-216ENST00000580283 RAB38P57729 211 aa5.65□□□□□ -1.5
PPP4R1-216ENST00000580283 LINC00205P59089 165 aa5.65□□□□□ -1.5
PPP4R1-216ENST00000580283 FUT7Q11130 342 aa5.65□□□□□ -1.5
PPP4R1-216ENST00000580283 SF3B4Q15427 424 aaKnown RBP eCLIP5.65□□□□□ -1.59e-12■■□□□ 13.6
PPP4R1-216ENST00000580283 NTRK2Q16620 822 aa5.65□□□□□ -1.5
PPP4R1-216ENST00000580283 KCTD19Q17RG1 926 aaPredicted RBP5.65□□□□□ -1.5
PPP4R1-216ENST00000580283 YRDCQ86U90 279 aaKnown RBP5.65□□□□□ -1.5
PPP4R1-216ENST00000580283 MEX3DQ86XN8 651 aaKnown RBP5.65□□□□□ -1.5
PPP4R1-216ENST00000580283 ZNF595Q8IYB9 648 aa5.65□□□□□ -1.5
PPP4R1-216ENST00000580283 PAQR4Q8N4S7 273 aaPredicted RBP5.65□□□□□ -1.5
PPP4R1-216ENST00000580283 FAM83FQ8NEG4 500 aaPredicted RBP5.65□□□□□ -1.5
PPP4R1-216ENST00000580283 OR5L2Q8NGL0 311 aa5.65□□□□□ -1.5
PPP4R1-216ENST00000580283 OR14A16Q8NHC5 309 aa5.65□□□□□ -1.5
PPP4R1-216ENST00000580283 RAB3IL1Q8TBN0 382 aa5.65□□□□□ -1.5
PPP4R1-216ENST00000580283 CD200R1Q8TD46 325 aa5.65□□□□□ -1.5
PPP4R1-216ENST00000580283 EEF1AKMT1Q8WVE0 214 aa5.65□□□□□ -1.5
PPP4R1-216ENST00000580283 NEUROG1Q92886 237 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms