RNA–Protein interactions for RNA: ENST00000577988.2

SNORD3B-1-201, Transcript of small nucleolar RNA, C/D box 3B-1, humanhuman

BASIC

Gene SNORD3B-1, Length 758 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3B-1-201ENST00000577988 AGAP20933 346 aa12.6□□□□□ -0.39
SNORD3B-1-201ENST00000577988 RPS4Y1P22090 263 aaKnown RBP12.6□□□□□ -0.39
SNORD3B-1-201ENST00000577988 ACVR2AP27037 513 aa12.6□□□□□ -0.39
SNORD3B-1-201ENST00000577988 ZNF41P51814 821 aaPredicted RBP12.6□□□□□ -0.39
SNORD3B-1-201ENST00000577988 GFRA1P56159 465 aa12.6□□□□□ -0.39
SNORD3B-1-201ENST00000577988 KCNJ10P78508 379 aa12.6□□□□□ -0.39
SNORD3B-1-201ENST00000577988 FGFBP1Q14512 234 aa12.6□□□□□ -0.39
SNORD3B-1-201ENST00000577988 CD226Q15762 336 aa12.6□□□□□ -0.39
SNORD3B-1-201ENST00000577988 EMC4Q5J8M3 183 aa12.6□□□□□ -0.39
SNORD3B-1-201ENST00000577988 RPTNQ6XPR3 784 aa12.6□□□□□ -0.39
SNORD3B-1-201ENST00000577988 PIGWQ7Z7B1 504 aa12.6□□□□□ -0.39
SNORD3B-1-201ENST00000577988 RETREG3Q86VR2 466 aa12.6□□□□□ -0.39
SNORD3B-1-201ENST00000577988 FJX1Q86VR8 437 aa12.6□□□□□ -0.39
SNORD3B-1-201ENST00000577988 ZNF614Q8N883 585 aa12.6□□□□□ -0.39
SNORD3B-1-201ENST00000577988 GATSQ8NAP1 163 aa12.6□□□□□ -0.39
SNORD3B-1-201ENST00000577988 DMRTA2Q96SC8 542 aa12.6□□□□□ -0.39
SNORD3B-1-201ENST00000577988 UGT2B28Q9BY64 529 aa12.6□□□□□ -0.39
SNORD3B-1-201ENST00000577988 PRDM14Q9GZV8 571 aa12.6□□□□□ -0.39
SNORD3B-1-201ENST00000577988 TMEM38AQ9H6F2 299 aa12.6□□□□□ -0.39
SNORD3B-1-201ENST00000577988 CACYBPQ9HB71 228 aaKnown RBP12.6□□□□□ -0.39
SNORD3B-1-201ENST00000577988 GID8Q9NWU2 228 aa12.6□□□□□ -0.39
SNORD3B-1-201ENST00000577988 KCNE5Q9UJ90 142 aa12.6□□□□□ -0.39
SNORD3B-1-201ENST00000577988 ICAM5Q9UMF0 924 aa12.6□□□□□ -0.39
SNORD3B-1-201ENST00000577988 ZNF232Q9UNY5 417 aa12.6□□□□□ -0.39
SNORD3B-1-201ENST00000577988 SLC6A5Q9Y345 797 aa12.6□□□□□ -0.39
SNORD3B-1-201ENST00000577988 HRH3Q9Y5N1 445 aa12.6□□□□□ -0.39
SNORD3B-1-201ENST00000577988 DOPEY2Q9Y3R5 2298 aa12.6□□□□□ -0.39
SNORD3B-1-201ENST00000577988 NCOA6Q14686 2063 aaPredicted RBP12.6□□□□□ -0.39
SNORD3B-1-201ENST00000577988 ARHGAP21Q5T5U3 1957 aa12.6□□□□□ -0.39
SNORD3B-1-201ENST00000577988 UBR5O95071 2799 aaPredicted RBP12.59□□□□□ -0.39
SNORD3B-1-201ENST00000577988 B4DXG7 233 aa12.59□□□□□ -0.39
SNORD3B-1-201ENST00000577988 FBP2O00757 339 aa12.59□□□□□ -0.39
SNORD3B-1-201ENST00000577988 DNAJA2O60884 412 aa12.59□□□□□ -0.39
SNORD3B-1-201ENST00000577988 ETS2P15036 469 aa12.59□□□□□ -0.39
SNORD3B-1-201ENST00000577988 IL7RP16871 459 aa12.59□□□□□ -0.39
SNORD3B-1-201ENST00000577988 ZNF17P17021 662 aa12.59□□□□□ -0.39
SNORD3B-1-201ENST00000577988 ADH6P28332 368 aa12.59□□□□□ -0.39
SNORD3B-1-201ENST00000577988 SMSP52788 366 aa12.59□□□□□ -0.39
SNORD3B-1-201ENST00000577988 EEFSECP57772 596 aaKnown RBP12.59□□□□□ -0.39
SNORD3B-1-201ENST00000577988 B3GALT5-AS1P59052 145 aa12.59□□□□□ -0.39
SNORD3B-1-201ENST00000577988 ZNF117Q03924 483 aa12.59□□□□□ -0.39
SNORD3B-1-201ENST00000577988 RBBP4Q09028 425 aa12.59□□□□□ -0.39
SNORD3B-1-201ENST00000577988 TMEM44Q2T9K0 475 aa12.59□□□□□ -0.39
SNORD3B-1-201ENST00000577988 TRMT5Q32P41 509 aaKnown RBP12.59□□□□□ -0.39
SNORD3B-1-201ENST00000577988 GCNT6Q5T4J0 391 aa12.59□□□□□ -0.39
SNORD3B-1-201ENST00000577988 XKRXQ6PP77 449 aa12.59□□□□□ -0.39
SNORD3B-1-201ENST00000577988 GTPBP8Q8N3Z3 284 aaPredicted RBP12.59□□□□□ -0.39
SNORD3B-1-201ENST00000577988 OR5W2Q8NH69 310 aa12.59□□□□□ -0.39
SNORD3B-1-201ENST00000577988 ZPLD1Q8TCW7 415 aa12.59□□□□□ -0.39
SNORD3B-1-201ENST00000577988 LRRC58Q96CX6 371 aa12.59□□□□□ -0.39
SNORD3B-1-201ENST00000577988 WDYHV1Q96HA8 205 aa12.59□□□□□ -0.39
SNORD3B-1-201ENST00000577988 TREX2Q9BQ50 279 aaPredicted RBP12.59□□□□□ -0.39
SNORD3B-1-201ENST00000577988 CPPED1Q9BRF8 314 aaPredicted RBP12.59□□□□□ -0.39
SNORD3B-1-201ENST00000577988 THUMPD3Q9BV44 507 aaKnown RBP12.59□□□□□ -0.39
SNORD3B-1-201ENST00000577988 FAM107BQ9H098 131 aa12.59□□□□□ -0.39
SNORD3B-1-201ENST00000577988 ARMC7Q9H6L4 198 aa12.59□□□□□ -0.39
SNORD3B-1-201ENST00000577988 EXOSC3Q9NQT5 275 aaKnown RBP12.59□□□□□ -0.39
SNORD3B-1-201ENST00000577988 PNPLA3Q9NST1 481 aa12.59□□□□□ -0.39
SNORD3B-1-201ENST00000577988 CARD8Q9Y2G2 431 aa12.59□□□□□ -0.39
SNORD3B-1-201ENST00000577988 ARL2BPQ9Y2Y0 163 aa12.59□□□□□ -0.39
SNORD3B-1-201ENST00000577988 IFT52Q9Y366 437 aa12.59□□□□□ -0.39
SNORD3B-1-201ENST00000577988 GPC6Q9Y625 555 aaPredicted RBP12.59□□□□□ -0.39
SNORD3B-1-201ENST00000577988 AP4B1Q9Y6B7 739 aa12.59□□□□□ -0.39
SNORD3B-1-201ENST00000577988 DSPPQ9NZW4 1301 aa12.59□□□□□ -0.39
SNORD3B-1-201ENST00000577988 LOC100653049A0A140TA62 436 aa12.58□□□□□ -0.4
SNORD3B-1-201ENST00000577988 C5orf58C9J3I9 102 aa12.58□□□□□ -0.4
SNORD3B-1-201ENST00000577988 MRASO14807 208 aa12.58□□□□□ -0.4
SNORD3B-1-201ENST00000577988 KRT34O76011 436 aa12.58□□□□□ -0.4
SNORD3B-1-201ENST00000577988 BCHEP06276 602 aa12.58□□□□□ -0.4
SNORD3B-1-201ENST00000577988 THBS1P07996 1170 aa12.58□□□□□ -0.4
SNORD3B-1-201ENST00000577988 ARAFP10398 606 aa12.58□□□□□ -0.4
SNORD3B-1-201ENST00000577988 PRDX6P30041 224 aa12.58□□□□□ -0.4
SNORD3B-1-201ENST00000577988 PGM1P36871 562 aa12.58□□□□□ -0.4
SNORD3B-1-201ENST00000577988 SLC6A8P48029 635 aa12.58□□□□□ -0.4
SNORD3B-1-201ENST00000577988 CBFBQ13951 182 aa12.58□□□□□ -0.4
SNORD3B-1-201ENST00000577988 LARS2Q15031 903 aaKnown RBP12.58□□□□□ -0.4
SNORD3B-1-201ENST00000577988 MAPK11Q15759 364 aa12.58□□□□□ -0.4
SNORD3B-1-201ENST00000577988 MAPK14Q16539 360 aa12.58□□□□□ -0.4
SNORD3B-1-201ENST00000577988 PLPPR5Q32ZL2 321 aa12.58□□□□□ -0.4
SNORD3B-1-201ENST00000577988 C1orf185Q5T7R7 199 aa12.58□□□□□ -0.4
SNORD3B-1-201ENST00000577988 RAET1LQ5VY80 246 aa12.58□□□□□ -0.4
SNORD3B-1-201ENST00000577988 REEP3Q6NUK4 255 aa12.58□□□□□ -0.4
SNORD3B-1-201ENST00000577988 ZNF585AQ6P3V2 769 aa12.58□□□□□ -0.4
SNORD3B-1-201ENST00000577988 B3GNT6Q6ZMB0 384 aa12.58□□□□□ -0.4
SNORD3B-1-201ENST00000577988 MTDHQ86UE4 582 aaKnown RBP12.58□□□□□ -0.4
SNORD3B-1-201ENST00000577988 SNX32Q86XE0 403 aa12.58□□□□□ -0.4
SNORD3B-1-201ENST00000577988 SLC30A8Q8IWU4 369 aa12.58□□□□□ -0.4
SNORD3B-1-201ENST00000577988 ZNF440Q8IYI8 595 aa12.58□□□□□ -0.4
SNORD3B-1-201ENST00000577988 ULK2Q8IYT8 1036 aa12.58□□□□□ -0.4
SNORD3B-1-201ENST00000577988 ZNF808Q8N4W9 903 aaPredicted RBP12.58□□□□□ -0.4
SNORD3B-1-201ENST00000577988 FAM71CQ8NEG0 241 aa12.58□□□□□ -0.4
SNORD3B-1-201ENST00000577988 OR8J3Q8NGG0 315 aa12.58□□□□□ -0.4
SNORD3B-1-201ENST00000577988 OR5M9Q8NGP3 310 aa12.58□□□□□ -0.4
SNORD3B-1-201ENST00000577988 BBS10Q8TAM1 723 aa12.58□□□□□ -0.4
SNORD3B-1-201ENST00000577988 GPR119Q8TDV5 335 aa12.58□□□□□ -0.4
SNORD3B-1-201ENST00000577988 TMEM234Q8WY98 164 aa12.58□□□□□ -0.4
SNORD3B-1-201ENST00000577988 ZG16BQ96DA0 208 aa12.58□□□□□ -0.4
SNORD3B-1-201ENST00000577988 CMTM5Q96DZ9 223 aa12.58□□□□□ -0.4
SNORD3B-1-201ENST00000577988 TMEM19Q96HH6 336 aa12.58□□□□□ -0.4
SNORD3B-1-201ENST00000577988 SH3YL1Q96HL8 342 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms