RNA–Protein interactions for RNA: ENST00000577802.1

CDK5RAP3-205, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 415 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-205ENST00000577802 PGCP20142 388 aa12.17□□□□□ -0.46
CDK5RAP3-205ENST00000577802 TNFRSF1BP20333 461 aa12.17□□□□□ -0.46
CDK5RAP3-205ENST00000577802 FPR1P21462 350 aa12.17□□□□□ -0.46
CDK5RAP3-205ENST00000577802 RRM2P31350 389 aa12.17□□□□□ -0.46
CDK5RAP3-205ENST00000577802 DNAJA1P31689 397 aaKnown RBP12.17□□□□□ -0.46
CDK5RAP3-205ENST00000577802 CCR4P51679 360 aa12.17□□□□□ -0.46
CDK5RAP3-205ENST00000577802 SKP2Q13309 424 aa12.17□□□□□ -0.46
CDK5RAP3-205ENST00000577802 FCRLBQ6BAA4 426 aa12.17□□□□□ -0.46
CDK5RAP3-205ENST00000577802 ZNF613Q6PF04 617 aa12.17□□□□□ -0.46
CDK5RAP3-205ENST00000577802 IL20RBQ6UXL0 311 aa12.17□□□□□ -0.46
CDK5RAP3-205ENST00000577802 C16orf47Q6ZP98 133 aaPredicted RBP12.17□□□□□ -0.46
CDK5RAP3-205ENST00000577802 APLFQ8IW19 511 aaPredicted RBP12.17□□□□□ -0.46
CDK5RAP3-205ENST00000577802 BEST3Q8N1M1 668 aa12.17□□□□□ -0.46
CDK5RAP3-205ENST00000577802 CLIP4Q8N3C7 705 aa12.17□□□□□ -0.46
CDK5RAP3-205ENST00000577802 PACRGLQ8N7B6 248 aa12.17□□□□□ -0.46
CDK5RAP3-205ENST00000577802 ICA1LQ8NDH6 482 aa12.17□□□□□ -0.46
CDK5RAP3-205ENST00000577802 OR10G3Q8NGC4 313 aa12.17□□□□□ -0.46
CDK5RAP3-205ENST00000577802 OR6T1Q8NGN1 323 aa12.17□□□□□ -0.46
CDK5RAP3-205ENST00000577802 OR5K1Q8NHB7 308 aa12.17□□□□□ -0.46
CDK5RAP3-205ENST00000577802 PAQR8Q8TEZ7 354 aa12.17□□□□□ -0.46
CDK5RAP3-205ENST00000577802 TM9SF4Q92544 642 aa12.17□□□□□ -0.46
CDK5RAP3-205ENST00000577802 MCHR1Q99705 422 aa12.17□□□□□ -0.46
CDK5RAP3-205ENST00000577802 SACM1LQ9NTJ5 587 aa12.17□□□□□ -0.46
CDK5RAP3-205ENST00000577802 RLIMQ9NVW2 624 aa12.17□□□□□ -0.46
CDK5RAP3-205ENST00000577802 GPR83Q9NYM4 423 aa12.17□□□□□ -0.46
CDK5RAP3-205ENST00000577802 STMN3Q9NZ72 180 aa12.17□□□□□ -0.46
CDK5RAP3-205ENST00000577802 CPAMD8Q8IZJ3 1885 aa12.17□□□□□ -0.46
CDK5RAP3-205ENST00000577802 PCSK5Q92824 1860 aa12.17□□□□□ -0.46
CDK5RAP3-205ENST00000577802 TRAPPC13A5PLN9 417 aa12.16□□□□□ -0.46
CDK5RAP3-205ENST00000577802 ANKRD33BA6NCL7 494 aa12.16□□□□□ -0.46
CDK5RAP3-205ENST00000577802 ARRDC5A6NEK1 342 aa12.16□□□□□ -0.46
CDK5RAP3-205ENST00000577802 TNFRSF11BO00300 401 aa12.16□□□□□ -0.46
CDK5RAP3-205ENST00000577802 EPPINO95925 133 aa12.16□□□□□ -0.46
CDK5RAP3-205ENST00000577802 LINGO3P0C6S8 592 aa12.16□□□□□ -0.46
CDK5RAP3-205ENST00000577802 ELAVL4P26378 380 aaKnown RBP12.16□□□□□ -0.46
CDK5RAP3-205ENST00000577802 IFNGR2P38484 337 aa12.16□□□□□ -0.46
CDK5RAP3-205ENST00000577802 VHLP40337 213 aa12.16□□□□□ -0.46
CDK5RAP3-205ENST00000577802 EIF2S3P41091 472 aaKnown RBP12.16□□□□□ -0.46
CDK5RAP3-205ENST00000577802 P2RX1P51575 399 aa12.16□□□□□ -0.46
CDK5RAP3-205ENST00000577802 CDH12P55289 794 aa12.16□□□□□ -0.46
CDK5RAP3-205ENST00000577802 TMPRSS3P57727 454 aa12.16□□□□□ -0.46
CDK5RAP3-205ENST00000577802 OC90Q02509 493 aaPredicted RBP12.16□□□□□ -0.46
CDK5RAP3-205ENST00000577802 EPS8Q12929 822 aa12.16□□□□□ -0.46
CDK5RAP3-205ENST00000577802 MFAP5Q13361 173 aa12.16□□□□□ -0.46
CDK5RAP3-205ENST00000577802 TRAM2Q15035 370 aa12.16□□□□□ -0.46
CDK5RAP3-205ENST00000577802 ENTPD8Q5MY95 495 aa12.16□□□□□ -0.46
CDK5RAP3-205ENST00000577802 ATP1A1-AS1Q5TC04 95 aa12.16□□□□□ -0.46
CDK5RAP3-205ENST00000577802 SLC22A10Q63ZE4 541 aa12.16□□□□□ -0.46
CDK5RAP3-205ENST00000577802 SHQ1Q6PI26 577 aaKnown RBP12.16□□□□□ -0.46
CDK5RAP3-205ENST00000577802 ZNF605Q86T29 641 aa12.16□□□□□ -0.46
CDK5RAP3-205ENST00000577802 LILRA2Q8N149 483 aa12.16□□□□□ -0.46
CDK5RAP3-205ENST00000577802 LSMEM1Q8N8F7 131 aa12.16□□□□□ -0.46
CDK5RAP3-205ENST00000577802 GATSQ8NAP1 163 aa12.16□□□□□ -0.46
CDK5RAP3-205ENST00000577802 B4GALNT2Q8NHY0 566 aa12.16□□□□□ -0.46
CDK5RAP3-205ENST00000577802 GRHL3Q8TE85 626 aa12.16□□□□□ -0.46
CDK5RAP3-205ENST00000577802 DNAJA4Q8WW22 397 aaPredicted RBP12.16□□□□□ -0.46
CDK5RAP3-205ENST00000577802 DNAJC9Q8WXX5 260 aa12.16□□□□□ -0.46
CDK5RAP3-205ENST00000577802 TMEM234Q8WY98 164 aa12.16□□□□□ -0.46
CDK5RAP3-205ENST00000577802 PSMF1Q92530 271 aa12.16□□□□□ -0.46
CDK5RAP3-205ENST00000577802 CNOT9Q92600 299 aaKnown RBP12.16□□□□□ -0.46
CDK5RAP3-205ENST00000577802 NODALQ96S42 347 aa12.16□□□□□ -0.46
CDK5RAP3-205ENST00000577802 PTGES2Q9H7Z7 377 aa12.16□□□□□ -0.46
CDK5RAP3-205ENST00000577802 KIF17Q9P2E2 1029 aa12.16□□□□□ -0.46
CDK5RAP3-205ENST00000577802 NKX1-2Q9UD57 310 aaPredicted RBP12.16□□□□□ -0.46
CDK5RAP3-205ENST00000577802 ENOPH1Q9UHY7 261 aa12.16□□□□□ -0.46
CDK5RAP3-205ENST00000577802 TESMINQ9Y4I5 508 aa12.16□□□□□ -0.46
CDK5RAP3-205ENST00000577802 ORC6Q9Y5N6 252 aa12.16□□□□□ -0.46
CDK5RAP3-205ENST00000577802 CHCHD2Q9Y6H1 151 aaPredicted RBP12.16□□□□□ -0.46
CDK5RAP3-205ENST00000577802 PIEZO1Q92508 2521 aa12.15□□□□□ -0.46
CDK5RAP3-205ENST00000577802 CFAP54Q96N23 3096 aa12.15□□□□□ -0.46
CDK5RAP3-205ENST00000577802 AHCTF1Q8WYP5 2266 aa12.15□□□□□ -0.46
CDK5RAP3-205ENST00000577802 IGLV3-32A0A0A0MS00 114 aa12.15□□□□□ -0.46
CDK5RAP3-205ENST00000577802 A0A1W2PRQ8 180 aa12.15□□□□□ -0.46
CDK5RAP3-205ENST00000577802 TMEM8BA6NDV4 472 aa12.15□□□□□ -0.46
CDK5RAP3-205ENST00000577802 CLDN24A6NM45 220 aa12.15□□□□□ -0.46
CDK5RAP3-205ENST00000577802 CPSF4LA6NMK7 179 aaKnown RBP12.15□□□□□ -0.46
CDK5RAP3-205ENST00000577802 G3V2T6 193 aa12.15□□□□□ -0.46
CDK5RAP3-205ENST00000577802 PEX1O43933 1283 aa12.15□□□□□ -0.46
CDK5RAP3-205ENST00000577802 NUDT14O95848 222 aa12.15□□□□□ -0.46
CDK5RAP3-205ENST00000577802 HPRP00739 348 aa12.15□□□□□ -0.46
CDK5RAP3-205ENST00000577802 GCKP35557 465 aa12.15□□□□□ -0.46
CDK5RAP3-205ENST00000577802 CASP3P42574 277 aa12.15□□□□□ -0.46
CDK5RAP3-205ENST00000577802 PTDSS1P48651 473 aaKnown RBP12.15□□□□□ -0.46
CDK5RAP3-205ENST00000577802 HSPA13P48723 471 aa12.15□□□□□ -0.46
CDK5RAP3-205ENST00000577802 MASP1P48740 699 aa12.15□□□□□ -0.46
CDK5RAP3-205ENST00000577802 ZNF41P51814 821 aaPredicted RBP12.15□□□□□ -0.46
CDK5RAP3-205ENST00000577802 ZNF136P52737 540 aa12.15□□□□□ -0.46
CDK5RAP3-205ENST00000577802 ZNF117Q03924 483 aa12.15□□□□□ -0.46
CDK5RAP3-205ENST00000577802 DGCR6Q14129 220 aa12.15□□□□□ -0.46
CDK5RAP3-205ENST00000577802 GANABQ14697 944 aaKnown RBP12.15□□□□□ -0.46
CDK5RAP3-205ENST00000577802 CD226Q15762 336 aa12.15□□□□□ -0.46
CDK5RAP3-205ENST00000577802 DEFB109BQ30KR1 87 aa12.15□□□□□ -0.46
CDK5RAP3-205ENST00000577802 FGD3Q5JSP0 725 aa12.15□□□□□ -0.46
CDK5RAP3-205ENST00000577802 OGFRL1Q5TC84 451 aaPredicted RBP12.15□□□□□ -0.46
CDK5RAP3-205ENST00000577802 B3GNTL1Q67FW5 361 aaPredicted RBP12.15□□□□□ -0.46
CDK5RAP3-205ENST00000577802 WBP2NLQ6ICG8 309 aa12.15□□□□□ -0.46
CDK5RAP3-205ENST00000577802 HMBOX1Q6NT76 420 aa12.15□□□□□ -0.46
CDK5RAP3-205ENST00000577802 AMIGO2Q86SJ2 522 aa12.15□□□□□ -0.46
CDK5RAP3-205ENST00000577802 MARCH3Q86UD3 253 aa12.15□□□□□ -0.46
CDK5RAP3-205ENST00000577802 PACS2Q86VP3 889 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms