RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 BMP7P18075 431 aa11.53□□□□□ -0.56
CDK5RAP3-203ENST00000577442 ACVR2AP27037 513 aa11.53□□□□□ -0.56
CDK5RAP3-203ENST00000577442 ADH7P40394 386 aa11.53□□□□□ -0.56
CDK5RAP3-203ENST00000577442 P2RX1P51575 399 aa11.53□□□□□ -0.56
CDK5RAP3-203ENST00000577442 SMSP52788 366 aa11.53□□□□□ -0.56
CDK5RAP3-203ENST00000577442 ZNF117Q03924 483 aa11.53□□□□□ -0.56
CDK5RAP3-203ENST00000577442 CHRNEQ04844 493 aa11.53□□□□□ -0.56
CDK5RAP3-203ENST00000577442 CYLC2Q14093 348 aaPredicted RBP11.53□□□□□ -0.56
CDK5RAP3-203ENST00000577442 FGFBP1Q14512 234 aa11.53□□□□□ -0.56
CDK5RAP3-203ENST00000577442 RPTNQ6XPR3 784 aa11.53□□□□□ -0.56
CDK5RAP3-203ENST00000577442 RETREG3Q86VR2 466 aa11.53□□□□□ -0.56
CDK5RAP3-203ENST00000577442 SNX32Q86XE0 403 aa11.53□□□□□ -0.56
CDK5RAP3-203ENST00000577442 CMIPQ8IY22 773 aa11.53□□□□□ -0.56
CDK5RAP3-203ENST00000577442 PEX5LQ8IYB4 626 aa11.53□□□□□ -0.56
CDK5RAP3-203ENST00000577442 OR5M9Q8NGP3 310 aa11.53□□□□□ -0.56
CDK5RAP3-203ENST00000577442 BBS10Q8TAM1 723 aa11.53□□□□□ -0.56
CDK5RAP3-203ENST00000577442 ANKRD27Q96NW4 1050 aa11.53□□□□□ -0.56
CDK5RAP3-203ENST00000577442 CPPED1Q9BRF8 314 aaPredicted RBP11.53□□□□□ -0.56
CDK5RAP3-203ENST00000577442 PRDM14Q9GZV8 571 aa11.53□□□□□ -0.56
CDK5RAP3-203ENST00000577442 LAT2Q9GZY6 243 aa11.53□□□□□ -0.56
CDK5RAP3-203ENST00000577442 MTHFD2LQ9H903 347 aaPredicted RBP11.53□□□□□ -0.56
CDK5RAP3-203ENST00000577442 PNPLA3Q9NST1 481 aa11.53□□□□□ -0.56
CDK5RAP3-203ENST00000577442 SLAMF8Q9P0V8 285 aa11.53□□□□□ -0.56
CDK5RAP3-203ENST00000577442 RPH3AQ9Y2J0 694 aaPredicted RBP11.53□□□□□ -0.56
CDK5RAP3-203ENST00000577442 MEMO1Q9Y316 297 aa11.53□□□□□ -0.56
CDK5RAP3-203ENST00000577442 L3MBTL1Q9Y468 752 aa11.53□□□□□ -0.56
CDK5RAP3-203ENST00000577442 INTS1Q8N201 2190 aaKnown RBP11.52□□□□□ -0.56
CDK5RAP3-203ENST00000577442 ARHGAP21Q5T5U3 1957 aa11.52□□□□□ -0.56
CDK5RAP3-203ENST00000577442 A0A0G2JPF8 293 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 C7orf72A4D263 438 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 AGAP5A6NIR3 686 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 AHRRA9YTQ3 701 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 HNRNPCL2B2RXH8 293 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 B4DXG7 233 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 HNRNPCL3B7ZW38 293 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 ZNHIT1O43257 154 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 ZIC3O60481 467 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 HNRNPCL1O60812 293 aaKnown RBP11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 NUDT14O95848 222 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 LDLRP01130 860 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 TFPTP0C1Z6 253 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 HNRNPCL4P0DMR1 293 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 ARAFP10398 606 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 PEPDP12955 493 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 CD1EP15812 388 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 GPX2P18283 190 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 TCEA1P23193 301 aaKnown RBP11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 EIF1P41567 113 aaKnown RBP11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 CCR4P51679 360 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 GFRA1P56159 465 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 SRSF1Q07955 248 aaKnown RBP eCLIP11.52□□□□□ -0.575e-7■■□□□ 13.6
CDK5RAP3-203ENST00000577442 SKP2Q13309 424 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 CBFBQ13951 182 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 ZSWIM7Q19AV6 140 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 LIN52Q52LA3 116 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 RUNDC3AQ59EK9 446 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 EMC4Q5J8M3 183 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 C1orf185Q5T7R7 199 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 REP15Q6BDI9 236 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 ZNF585AQ6P3V2 769 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 B3GNT6Q6ZMB0 384 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 OLIG3Q7RTU3 272 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 ULK2Q8IYT8 1036 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 GTPBP8Q8N3Z3 284 aaPredicted RBP11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 RP9Q8TA86 221 aaKnown RBP11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 SLC38A5Q8WUX1 472 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 WDR60Q8WVS4 1066 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 CCDC120Q96HB5 630 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 TMEM19Q96HH6 336 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 TIMP4Q99727 224 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 SH3GL1Q99961 368 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 TREX2Q9BQ50 279 aaPredicted RBP11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 ARMC7Q9H6L4 198 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 BCL2L10Q9HD36 194 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 MED17Q9NVC6 651 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 GID8Q9NWU2 228 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 ARMCX1Q9P291 453 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 TNFRSF10DQ9UBN6 386 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 KCNE5Q9UJ90 142 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 CAMK2AQ9UQM7 478 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 VDAC3Q9Y277 283 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 CARD8Q9Y2G2 431 aa11.52□□□□□ -0.57
CDK5RAP3-203ENST00000577442 DOCK7Q96N67 2140 aa11.51□□□□□ -0.57
CDK5RAP3-203ENST00000577442 ASH1LQ9NR48 2969 aaKnown RBP11.51□□□□□ -0.57
CDK5RAP3-203ENST00000577442 CENPVL1A0A0U1RR11 272 aa11.51□□□□□ -0.57
CDK5RAP3-203ENST00000577442 OR2M5A3KFT3 312 aa11.51□□□□□ -0.57
CDK5RAP3-203ENST00000577442 H0Y3Z8 333 aa11.51□□□□□ -0.57
CDK5RAP3-203ENST00000577442 GMFGO60234 142 aa11.51□□□□□ -0.57
CDK5RAP3-203ENST00000577442 CYP7B1O75881 506 aa11.51□□□□□ -0.57
CDK5RAP3-203ENST00000577442 NID1P14543 1247 aa11.51□□□□□ -0.57
CDK5RAP3-203ENST00000577442 UQCRBP14927 111 aa11.51□□□□□ -0.57
CDK5RAP3-203ENST00000577442 IL7RP16871 459 aa11.51□□□□□ -0.57
CDK5RAP3-203ENST00000577442 POU3F2P20265 443 aaPredicted RBP11.51□□□□□ -0.57
CDK5RAP3-203ENST00000577442 RPS4Y1P22090 263 aaKnown RBP11.51□□□□□ -0.57
CDK5RAP3-203ENST00000577442 ELK4P28324 431 aa11.51□□□□□ -0.57
CDK5RAP3-203ENST00000577442 SLC6A8P48029 635 aa11.51□□□□□ -0.57
CDK5RAP3-203ENST00000577442 RNF144AP50876 292 aaPredicted RBP11.51□□□□□ -0.57
CDK5RAP3-203ENST00000577442 B3GALT5-AS1P59052 145 aa11.51□□□□□ -0.57
CDK5RAP3-203ENST00000577442 KCNJ10P78508 379 aa11.51□□□□□ -0.57
CDK5RAP3-203ENST00000577442 LARS2Q15031 903 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms