RNA–Protein interactions for RNA: ENST00000577435.5

GGA3-203, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-203ENST00000577435 RFXANKO14593 260 aa12.6□□□□□ -0.39
GGA3-203ENST00000577435 EIF4E2O60573 245 aaKnown RBP12.6□□□□□ -0.39
GGA3-203ENST00000577435 DNAJA2O60884 412 aa12.6□□□□□ -0.39
GGA3-203ENST00000577435 LINGO3P0C6S8 592 aa12.6□□□□□ -0.39
GGA3-203ENST00000577435 NPIPA8P0DM63 369 aa12.6□□□□□ -0.39
GGA3-203ENST00000577435 POU3F2P20265 443 aaPredicted RBP12.6□□□□□ -0.39
GGA3-203ENST00000577435 TCEA1P23193 301 aaKnown RBP12.6□□□□□ -0.39
GGA3-203ENST00000577435 ADH6P28332 368 aa12.6□□□□□ -0.39
GGA3-203ENST00000577435 OPRM1P35372 400 aa12.6□□□□□ -0.39
GGA3-203ENST00000577435 EIF1P41567 113 aaKnown RBP12.6□□□□□ -0.39
GGA3-203ENST00000577435 CDKN2CP42773 168 aa12.6□□□□□ -0.39
GGA3-203ENST00000577435 KHKP50053 298 aa12.6□□□□□ -0.39
GGA3-203ENST00000577435 ANXA11P50995 505 aaKnown RBP12.6□□□□□ -0.39
GGA3-203ENST00000577435 P2RX1P51575 399 aa12.6□□□□□ -0.39
GGA3-203ENST00000577435 SUCLG1P53597 346 aaKnown RBP12.6□□□□□ -0.39
GGA3-203ENST00000577435 AQP5P55064 265 aa12.6□□□□□ -0.39
GGA3-203ENST00000577435 EEF1A1P68104 462 aaKnown RBP12.6□□□□□ -0.39
GGA3-203ENST00000577435 ZNF117Q03924 483 aa12.6□□□□□ -0.39
GGA3-203ENST00000577435 PLPPR5Q32ZL2 321 aa12.6□□□□□ -0.39
GGA3-203ENST00000577435 FBXL19-AS1Q494R0 122 aa12.6□□□□□ -0.39
GGA3-203ENST00000577435 EEF1A1P5Q5VTE0 462 aa12.6□□□□□ -0.39
GGA3-203ENST00000577435 TNFAIP8L2Q6P589 184 aaPredicted RBP12.6□□□□□ -0.39
GGA3-203ENST00000577435 C16orf62Q7Z3J2 963 aa12.6□□□□□ -0.39
GGA3-203ENST00000577435 C9orf106Q8NAJ2 232 aa12.6□□□□□ -0.39
GGA3-203ENST00000577435 TOR1AIP2Q8NFQ8 470 aa12.6□□□□□ -0.39
GGA3-203ENST00000577435 ZFP90Q8TF47 636 aa12.6□□□□□ -0.39
GGA3-203ENST00000577435 PMM1Q92871 262 aa12.6□□□□□ -0.39
GGA3-203ENST00000577435 RAB8BQ92930 207 aa12.6□□□□□ -0.39
GGA3-203ENST00000577435 MARK4Q96L34 752 aa12.6□□□□□ -0.39
GGA3-203ENST00000577435 EBF4Q9BQW3 602 aa12.6□□□□□ -0.39
GGA3-203ENST00000577435 RMND5AQ9H871 391 aa12.6□□□□□ -0.39
GGA3-203ENST00000577435 ZNF446Q9NWS9 450 aa12.6□□□□□ -0.39
GGA3-203ENST00000577435 KCNE5Q9UJ90 142 aa12.6□□□□□ -0.39
GGA3-203ENST00000577435 LIPT1Q9Y234 373 aa12.6□□□□□ -0.39
GGA3-203ENST00000577435 PRAMEF27A3QJZ7 478 aa12.59□□□□□ -0.39
GGA3-203ENST00000577435 SERINC4A6NH21 518 aa12.59□□□□□ -0.39
GGA3-203ENST00000577435 GTPBP1O00178 669 aaKnown RBP12.59□□□□□ -0.39
GGA3-203ENST00000577435 ZNF264O43296 627 aa12.59□□□□□ -0.39
GGA3-203ENST00000577435 KIAA0513O60268 411 aa12.59□□□□□ -0.39
GGA3-203ENST00000577435 UGT2B17O75795 530 aa12.59□□□□□ -0.39
GGA3-203ENST00000577435 KRT75O95678 551 aa12.59□□□□□ -0.39
GGA3-203ENST00000577435 CRHP06850 196 aa12.59□□□□□ -0.39
GGA3-203ENST00000577435 PRF1P14222 555 aa12.59□□□□□ -0.39
GGA3-203ENST00000577435 ZNF41P51814 821 aaPredicted RBP12.59□□□□□ -0.39
GGA3-203ENST00000577435 CASP9P55211 416 aa12.59□□□□□ -0.39
GGA3-203ENST00000577435 RAC1P63000 192 aa12.59□□□□□ -0.39
GGA3-203ENST00000577435 FUT5Q11128 374 aa12.59□□□□□ -0.39
GGA3-203ENST00000577435 GPR68Q15743 365 aa12.59□□□□□ -0.39
GGA3-203ENST00000577435 PDZK1Q5T2W1 519 aa12.59□□□□□ -0.39
GGA3-203ENST00000577435 TYW3Q6IPR3 259 aaKnown RBP12.59□□□□□ -0.39
GGA3-203ENST00000577435 CBLN3Q6UW01 205 aa12.59□□□□□ -0.39
GGA3-203ENST00000577435 MEX3BQ6ZN04 569 aaKnown RBP12.59□□□□□ -0.39
GGA3-203ENST00000577435 CHMP1BQ7LBR1 199 aa12.59□□□□□ -0.39
GGA3-203ENST00000577435 RNF130Q86XS8 419 aa12.59□□□□□ -0.39
GGA3-203ENST00000577435 MCEMP1Q8IX19 187 aa12.59□□□□□ -0.39
GGA3-203ENST00000577435 DMRTC2Q8IXT2 367 aaPredicted RBP12.59□□□□□ -0.39
GGA3-203ENST00000577435 ZNF295-AS1Q8N0V1 137 aa12.59□□□□□ -0.39
GGA3-203ENST00000577435 METTL25Q8N6Q8 603 aa12.59□□□□□ -0.39
GGA3-203ENST00000577435 RELL2Q8NC24 303 aaPredicted RBP12.59□□□□□ -0.39
GGA3-203ENST00000577435 OR5M1Q8NGP8 315 aa12.59□□□□□ -0.39
GGA3-203ENST00000577435 OR9I1Q8NGQ6 314 aa12.59□□□□□ -0.39
GGA3-203ENST00000577435 GPR119Q8TDV5 335 aa12.59□□□□□ -0.39
GGA3-203ENST00000577435 ROPN1LQ96C74 230 aa12.59□□□□□ -0.39
GGA3-203ENST00000577435 ARSGQ96EG1 525 aa12.59□□□□□ -0.39
GGA3-203ENST00000577435 SH3YL1Q96HL8 342 aaPredicted RBP12.59□□□□□ -0.39
GGA3-203ENST00000577435 ITCHQ96J02 903 aa12.59□□□□□ -0.39
GGA3-203ENST00000577435 TRNT1Q96Q11 434 aaKnown RBP12.59□□□□□ -0.39
GGA3-203ENST00000577435 KLHDC3Q9BQ90 382 aa12.59□□□□□ -0.39
GGA3-203ENST00000577435 TRIM8Q9BZR9 551 aa12.59□□□□□ -0.39
GGA3-203ENST00000577435 LAT2Q9GZY6 243 aa12.59□□□□□ -0.39
GGA3-203ENST00000577435 SLC24A3Q9HC58 644 aa12.59□□□□□ -0.39
GGA3-203ENST00000577435 JKAMPQ9P055 326 aa12.59□□□□□ -0.39
GGA3-203ENST00000577435 MKLN1Q9UL63 735 aa12.59□□□□□ -0.39
GGA3-203ENST00000577435 VDAC3Q9Y277 283 aa12.59□□□□□ -0.39
GGA3-203ENST00000577435 CARD8Q9Y2G2 431 aa12.59□□□□□ -0.39
GGA3-203ENST00000577435 ZNF175Q9Y473 711 aa12.59□□□□□ -0.39
GGA3-203ENST00000577435 WDR45Q9Y484 360 aa12.59□□□□□ -0.39
GGA3-203ENST00000577435 FBN2P35556 2912 aa12.59□□□□□ -0.39
GGA3-203ENST00000577435 SPG11Q96JI7 2443 aa12.58□□□□□ -0.4
GGA3-203ENST00000577435 H3BML4 177 aa12.58□□□□□ -0.4
GGA3-203ENST00000577435 ETV2O00321 342 aaPredicted RBP12.58□□□□□ -0.4
GGA3-203ENST00000577435 ADAMDEC1O15204 470 aa12.58□□□□□ -0.4
GGA3-203ENST00000577435 OIP5O43482 229 aa12.58□□□□□ -0.4
GGA3-203ENST00000577435 GMFGO60234 142 aa12.58□□□□□ -0.4
GGA3-203ENST00000577435 EDF1O60869 148 aaKnown RBP12.58□□□□□ -0.4
GGA3-203ENST00000577435 TGM6O95932 706 aa12.58□□□□□ -0.4
GGA3-203ENST00000577435 C1QCP02747 245 aa12.58□□□□□ -0.4
GGA3-203ENST00000577435 GSNP06396 782 aa12.58□□□□□ -0.4
GGA3-203ENST00000577435 TMIGD3P0DMS9 266 aaPredicted RBP12.58□□□□□ -0.4
GGA3-203ENST00000577435 PEX19P40855 299 aa12.58□□□□□ -0.4
GGA3-203ENST00000577435 ATP4BP51164 291 aa12.58□□□□□ -0.4
GGA3-203ENST00000577435 MVDP53602 400 aa12.58□□□□□ -0.4
GGA3-203ENST00000577435 CLDN20P56880 219 aa12.58□□□□□ -0.4
GGA3-203ENST00000577435 RPS3AP61247 264 aaKnown RBP12.58□□□□□ -0.4
GGA3-203ENST00000577435 STX1BP61266 288 aa12.58□□□□□ -0.4
GGA3-203ENST00000577435 SLC25A53Q5H9E4 307 aa12.58□□□□□ -0.4
GGA3-203ENST00000577435 BLOC1S3Q6QNY0 202 aa12.58□□□□□ -0.4
GGA3-203ENST00000577435 FRRS1Q6ZNA5 592 aa12.58□□□□□ -0.4
GGA3-203ENST00000577435 LRRC74BQ6ZQY2 392 aa12.58□□□□□ -0.4
GGA3-203ENST00000577435 GGNQ86UU5 652 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms