RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 CXorf36Q9H7Y0 433 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 PELI2Q9HAT8 420 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 ZNF334Q9HCZ1 680 aaPredicted RBP12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 SDHAF2Q9NX18 166 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 FOXE1O00358 373 aaPredicted RBP12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 NDUFB2O95178 105 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 FBXO45P0C2W1 286 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 ADRB3P13945 408 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 LSSP48449 732 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 KCNJ5P48544 419 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 SRP9P49458 86 aaKnown RBP12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 SORDQ00796 357 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 PLEKHN1Q494U1 663 aaPredicted RBP12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 C18orf63Q68DL7 685 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 PTOV1Q86YD1 416 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 MFSD8Q8NHS3 518 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 DGAT2Q96PD7 388 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 DDOQ99489 341 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 EIF5A2Q9GZV4 153 aaKnown RBP12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 PRSS23O95084 383 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 SOD2P04179 222 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 ADH5P11766 374 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 CPEP16870 476 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 ELK1P19419 428 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 PBX2P40425 430 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 EVX1P49640 407 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 ENTPD8Q5MY95 495 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 ZNF852Q6ZMS4 543 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 FAM26EQ8N5C1 309 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 OR5AR1Q8NGP9 310 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 OR10K1Q8NGX5 313 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 ABHD4Q8TB40 342 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 TCTEX1D2Q8WW35 142 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 TBL1XR1Q9BZK7 514 aa12.32□□□□□ -0.44
PCDHGB3-201ENST00000576222 ARID1BQ8NFD5 2236 aaPredicted RBP12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 UPK1AO00322 258 aa12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 SGCEO43556 437 aa12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 IGFBP1P08833 259 aaPredicted RBP12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 INHBBP09529 407 aa12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 MMP11P24347 488 aa12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 ERVFC1P60507 584 aa12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 RPS27AP62979 156 aaKnown RBP12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 UBA52P62987 128 aaKnown RBP12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 GPLD1P80108 840 aa12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 PRKCZQ05513 592 aa12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 HSD11B1LQ7Z5J1 315 aa12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 VRK2Q86Y07 508 aa12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 GRAMD2AQ8IUY3 354 aa12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 TRIB2Q92519 343 aa12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 GAL3ST3Q96A11 431 aa12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 RADILQ96JH8 1075 aa12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 ZNF559Q9BR84 538 aa12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 SLAMF7Q9NQ25 335 aa12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 ZNF225Q9UK10 706 aa12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 FBXL2Q9UKC9 423 aa12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 DLEC1Q9Y238 1755 aa12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 EVPLQ92817 2033 aa12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 BORCS7-ASMTA0A0B4J1R7 106 aa12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 TOMM20Q15388 145 aa12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 C8orf82Q6P1X6 216 aaPredicted RBP12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 LCTLQ6UWM7 567 aa12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 GLCCI1Q86VQ1 547 aa12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 CALHM3Q86XJ0 350 aa12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 NRSN1Q8IZ57 195 aa12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 KIAA1958Q8N8K9 716 aa12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 OR5T2Q8NGG2 359 aa12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 OR1J4Q8NGS1 313 aa12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 OR52N1Q8NH53 320 aa12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 IGSF21Q96ID5 467 aa12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 RTP3Q9BQQ7 232 aa12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 TMEM168Q9H0V1 697 aa12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 CXXC1Q9P0U4 656 aaPredicted RBP12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 ADAMTSL3P82987 1691 aa12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 TOR1AO14656 332 aa12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 SSX4O60224 188 aa12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 PIP5K1CO60331 668 aa12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 SNAPINO95295 136 aa12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 RAB40ALP0C0E4 278 aa12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 RGS19P49795 217 aa12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 IFITM3Q01628 133 aa12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 DUSP6Q16828 381 aa12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 SMAP2Q8WU79 429 aaPredicted RBP12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 RAB40AQ8WXH6 277 aa12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 TANKQ92844 425 aa12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 GHSRQ92847 366 aa12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 PHB2Q99623 299 aa12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 USP36Q9P275 1121 aaKnown RBP12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 CAMK2AQ9UQM7 478 aa12.31□□□□□ -0.44
PCDHGB3-201ENST00000576222 MYADML2A6NDP7 307 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 MEIS3P1A6NDR6 274 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 AK1P00568 194 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 DCNP07585 359 aaKnown RBP12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 IMPA1P29218 277 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 CCKBRP32239 447 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 VAMP2P63027 116 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 SIM1P81133 766 aaPredicted RBP12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 DECR1Q16698 335 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 NKPD1Q17RQ9 610 aa12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 HENMT1Q5T8I9 393 aaKnown RBP12.3□□□□□ -0.44
PCDHGB3-201ENST00000576222 ZBTB37Q5TC79 503 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms