RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 MED12Q93074 2177 aa12.01□□□□□ -0.49
RPAIN-216ENST00000575599 A0A0G2JNJ9 132 aa12.01□□□□□ -0.49
RPAIN-216ENST00000575599 CYSRT1A8MQ03 144 aa12.01□□□□□ -0.49
RPAIN-216ENST00000575599 AHRRA9YTQ3 701 aa12.01□□□□□ -0.49
RPAIN-216ENST00000575599 B2RBV5 119 aa12.01□□□□□ -0.49
RPAIN-216ENST00000575599 RFXANKO14593 260 aa12.01□□□□□ -0.49
RPAIN-216ENST00000575599 ANP32DO95626 131 aa12.01□□□□□ -0.49
RPAIN-216ENST00000575599 C1QCP02747 245 aa12.01□□□□□ -0.49
RPAIN-216ENST00000575599 HOXD4P09016 255 aaPredicted RBP12.01□□□□□ -0.49
RPAIN-216ENST00000575599 OR12D1P0DN82 309 aa12.01□□□□□ -0.49
RPAIN-216ENST00000575599 CHRNB4P30926 498 aa12.01□□□□□ -0.49
RPAIN-216ENST00000575599 KHKP50053 298 aa12.01□□□□□ -0.49
RPAIN-216ENST00000575599 NUDT2P50583 147 aa12.01□□□□□ -0.49
RPAIN-216ENST00000575599 GFRA1P56159 465 aa12.01□□□□□ -0.49
RPAIN-216ENST00000575599 LRRC74AQ0VAA2 488 aa12.01□□□□□ -0.49
RPAIN-216ENST00000575599 CD226Q15762 336 aa12.01□□□□□ -0.49
RPAIN-216ENST00000575599 C6orf10Q5SRN2 563 aa12.01□□□□□ -0.49
RPAIN-216ENST00000575599 REP15Q6BDI9 236 aa12.01□□□□□ -0.49
RPAIN-216ENST00000575599 ZNF621Q6ZSS3 439 aa12.01□□□□□ -0.49
RPAIN-216ENST00000575599 MSANTD1Q6ZTZ1 278 aa12.01□□□□□ -0.49
RPAIN-216ENST00000575599 OLIG3Q7RTU3 272 aa12.01□□□□□ -0.49
RPAIN-216ENST00000575599 YTHDF3Q7Z739 585 aaKnown RBP12.01□□□□□ -0.49
RPAIN-216ENST00000575599 RNF130Q86XS8 419 aa12.01□□□□□ -0.49
RPAIN-216ENST00000575599 GOT1L1Q8NHS2 421 aaPredicted RBP12.01□□□□□ -0.49
RPAIN-216ENST00000575599 PNPT1Q8TCS8 783 aaKnown RBP12.01□□□□□ -0.49
RPAIN-216ENST00000575599 PHOSPHO1Q8TCT1 267 aa12.01□□□□□ -0.49
RPAIN-216ENST00000575599 XAGE5Q8WWM1 108 aa12.01□□□□□ -0.49
RPAIN-216ENST00000575599 ASB5Q8WWX0 329 aa12.01□□□□□ -0.49
RPAIN-216ENST00000575599 RAB8BQ92930 207 aa12.01□□□□□ -0.49
RPAIN-216ENST00000575599 RCN3Q96D15 328 aa12.01□□□□□ -0.49
RPAIN-216ENST00000575599 NEURL3Q96EH8 262 aa12.01□□□□□ -0.49
RPAIN-216ENST00000575599 C1GALT1C1Q96EU7 318 aa12.01□□□□□ -0.49
RPAIN-216ENST00000575599 ITCHQ96J02 903 aa12.01□□□□□ -0.49
RPAIN-216ENST00000575599 SDF2Q99470 211 aa12.01□□□□□ -0.49
RPAIN-216ENST00000575599 EXD2Q9NVH0 621 aa12.01□□□□□ -0.49
RPAIN-216ENST00000575599 Q9UFV3 132 aa12.01□□□□□ -0.49
RPAIN-216ENST00000575599 VDAC3Q9Y277 283 aa12.01□□□□□ -0.49
RPAIN-216ENST00000575599 MRPS18CQ9Y3D5 142 aaKnown RBP12.01□□□□□ -0.49
RPAIN-216ENST00000575599 UTP20O75691 2785 aaKnown RBP12□□□□□ -0.49
RPAIN-216ENST00000575599 IGLV3-32A0A0A0MS00 114 aa12□□□□□ -0.49
RPAIN-216ENST00000575599 A0A1W2PQD3 144 aa12□□□□□ -0.49
RPAIN-216ENST00000575599 SHISA8B8ZZ34 492 aa12□□□□□ -0.49
RPAIN-216ENST00000575599 GYG2O15488 501 aa12□□□□□ -0.49
RPAIN-216ENST00000575599 HCRTR2O43614 444 aa12□□□□□ -0.49
RPAIN-216ENST00000575599 AK1P00568 194 aa12□□□□□ -0.49
RPAIN-216ENST00000575599 CAPN3P20807 821 aa12□□□□□ -0.49
RPAIN-216ENST00000575599 ADH7P40394 386 aa12□□□□□ -0.49
RPAIN-216ENST00000575599 ZFP36L2P47974 494 aaKnown RBP12□□□□□ -0.49
RPAIN-216ENST00000575599 LHX2P50458 406 aa12□□□□□ -0.49
RPAIN-216ENST00000575599 B3GALT5-AS1P59052 145 aa12□□□□□ -0.49
RPAIN-216ENST00000575599 NFYCQ13952 458 aa12□□□□□ -0.49
RPAIN-216ENST00000575599 GPR68Q15743 365 aa12□□□□□ -0.49
RPAIN-216ENST00000575599 ZNF630Q2M218 657 aaPredicted RBP12□□□□□ -0.49
RPAIN-216ENST00000575599 COQ5Q5HYK3 327 aa12□□□□□ -0.49
RPAIN-216ENST00000575599 ATAD3BQ5T9A4 648 aa12□□□□□ -0.49
RPAIN-216ENST00000575599 ARSKQ6UWY0 536 aa12□□□□□ -0.49
RPAIN-216ENST00000575599 C16orf89Q6UX73 402 aa12□□□□□ -0.49
RPAIN-216ENST00000575599 SEM1Q6ZVN7 128 aa12□□□□□ -0.49
RPAIN-216ENST00000575599 MISPQ8IVT2 679 aa12□□□□□ -0.49
RPAIN-216ENST00000575599 UBQLNLQ8IYU4 475 aa12□□□□□ -0.49
RPAIN-216ENST00000575599 CHDHQ8NE62 594 aaPredicted RBP12□□□□□ -0.49
RPAIN-216ENST00000575599 MIPOL1Q8TD10 442 aa12□□□□□ -0.49
RPAIN-216ENST00000575599 UCK2Q9BZX2 261 aa12□□□□□ -0.49
RPAIN-216ENST00000575599 HOXD1Q9GZZ0 328 aa12□□□□□ -0.49
RPAIN-216ENST00000575599 ARHGAP21Q5T5U3 1957 aa12□□□□□ -0.49
RPAIN-216ENST00000575599 SETXQ7Z333 2677 aaKnown RBP12□□□□□ -0.49
RPAIN-216ENST00000575599 NKX2-6A6NCS4 301 aa11.99□□□□□ -0.49
RPAIN-216ENST00000575599 FAM47E-STBD1D6RA91 191 aa11.99□□□□□ -0.49
RPAIN-216ENST00000575599 H3BML4 177 aa11.99□□□□□ -0.49
RPAIN-216ENST00000575599 H3BNH8 94 aa11.99□□□□□ -0.49
RPAIN-216ENST00000575599 C19orf84I3L1E1 186 aa11.99□□□□□ -0.49
RPAIN-216ENST00000575599 TNFRSF21O75509 655 aa11.99□□□□□ -0.49
RPAIN-216ENST00000575599 STX11O75558 287 aa11.99□□□□□ -0.49
RPAIN-216ENST00000575599 EPPINO95925 133 aa11.99□□□□□ -0.49
RPAIN-216ENST00000575599 AGR2O95994 175 aa11.99□□□□□ -0.49
RPAIN-216ENST00000575599 T-ENOLP0DO92 83 aa11.99□□□□□ -0.49
RPAIN-216ENST00000575599 ZNF708P17019 499 aa11.99□□□□□ -0.49
RPAIN-216ENST00000575599 POU3F2P20265 443 aaPredicted RBP11.99□□□□□ -0.49
RPAIN-216ENST00000575599 CHMP24386 653 aa11.99□□□□□ -0.49
RPAIN-216ENST00000575599 ZNF41P51814 821 aaPredicted RBP11.99□□□□□ -0.49
RPAIN-216ENST00000575599 ATP12AP54707 1039 aa11.99□□□□□ -0.49
RPAIN-216ENST00000575599 HPCAP84074 193 aa11.99□□□□□ -0.49
RPAIN-216ENST00000575599 SF3B4Q15427 424 aaKnown RBP eCLIP11.99□□□□□ -0.495e-17■■■■■ 28.1
RPAIN-216ENST00000575599 NDUFAF6Q330K2 333 aa11.99□□□□□ -0.49
RPAIN-216ENST00000575599 ARHGAP11BQ3KRB8 267 aa11.99□□□□□ -0.49
RPAIN-216ENST00000575599 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.99□□□□□ -0.49
RPAIN-216ENST00000575599 RIPPLY2Q5TAB7 128 aa11.99□□□□□ -0.49
RPAIN-216ENST00000575599 SP5Q6BEB4 398 aaPredicted RBP11.99□□□□□ -0.49
RPAIN-216ENST00000575599 SLC2A7Q6PXP3 512 aa11.99□□□□□ -0.49
RPAIN-216ENST00000575599 LACC1Q8IV20 430 aa11.99□□□□□ -0.49
RPAIN-216ENST00000575599 TNIP2Q8NFZ5 429 aa11.99□□□□□ -0.49
RPAIN-216ENST00000575599 B4GALNT2Q8NHY0 566 aa11.99□□□□□ -0.49
RPAIN-216ENST00000575599 SMPDL3BQ92485 455 aa11.99□□□□□ -0.49
RPAIN-216ENST00000575599 ROPN1LQ96C74 230 aa11.99□□□□□ -0.49
RPAIN-216ENST00000575599 TUBA1CQ9BQE3 449 aa11.99□□□□□ -0.49
RPAIN-216ENST00000575599 PIGQQ9BRB3 760 aa11.99□□□□□ -0.49
RPAIN-216ENST00000575599 HHATLQ9HCP6 504 aa11.99□□□□□ -0.49
RPAIN-216ENST00000575599 CHST11Q9NPF2 352 aa11.99□□□□□ -0.49
RPAIN-216ENST00000575599 SLC6A13Q9NSD5 602 aa11.99□□□□□ -0.49
RPAIN-216ENST00000575599 MKLN1Q9UL63 735 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms