RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 GSG1LQ6UXU4 331 aa13.43□□□□□ -0.26
SMG6-215ENST00000574501 GLDNQ6ZMI3 551 aaPredicted RBP13.43□□□□□ -0.26
SMG6-215ENST00000574501 Q6ZVL8 140 aa13.43□□□□□ -0.26
SMG6-215ENST00000574501 RGMAQ96B86 450 aa13.43□□□□□ -0.26
SMG6-215ENST00000574501 ZNF707Q96C28 371 aaPredicted RBP13.43□□□□□ -0.26
SMG6-215ENST00000574501 TM4SF18Q96CE8 201 aa13.43□□□□□ -0.26
SMG6-215ENST00000574501 ZG16BQ96DA0 208 aa13.43□□□□□ -0.26
SMG6-215ENST00000574501 SLC35G5Q96KT7 338 aa13.43□□□□□ -0.26
SMG6-215ENST00000574501 SAMD8Q96LT4 415 aa13.43□□□□□ -0.26
SMG6-215ENST00000574501 HCAR1Q9BXC0 346 aa13.43□□□□□ -0.26
SMG6-215ENST00000574501 SLC6A20Q9NP91 592 aa13.43□□□□□ -0.26
SMG6-215ENST00000574501 EXOSC3Q9NQT5 275 aaKnown RBP13.43□□□□□ -0.26
SMG6-215ENST00000574501 KLK11Q9UBX7 282 aa13.43□□□□□ -0.26
SMG6-215ENST00000574501 ENTPD4Q9Y227 616 aa13.43□□□□□ -0.26
SMG6-215ENST00000574501 KIF26AQ9ULI4 1882 aaPredicted RBP13.43□□□□□ -0.26
SMG6-215ENST00000574501 A0A1B0GUH1 482 aa13.42□□□□□ -0.26
SMG6-215ENST00000574501 PRAF2O60831 178 aa13.42□□□□□ -0.26
SMG6-215ENST00000574501 ALPPL2P10696 532 aa13.42□□□□□ -0.26
SMG6-215ENST00000574501 PTHLHP12272 177 aa13.42□□□□□ -0.26
SMG6-215ENST00000574501 CD70P32970 193 aa13.42□□□□□ -0.26
SMG6-215ENST00000574501 TRHRP34981 398 aaPredicted RBP13.42□□□□□ -0.26
SMG6-215ENST00000574501 ERVK-25P63136 954 aa13.42□□□□□ -0.26
SMG6-215ENST00000574501 PLD1Q13393 1074 aa13.42□□□□□ -0.26
SMG6-215ENST00000574501 IGSF11Q5DX21 431 aa13.42□□□□□ -0.26
SMG6-215ENST00000574501 NXPE4Q6UWF7 544 aa13.42□□□□□ -0.26
SMG6-215ENST00000574501 SERPINA12Q8IW75 414 aa13.42□□□□□ -0.26
SMG6-215ENST00000574501 NRMQ8IXM6 262 aa13.42□□□□□ -0.26
SMG6-215ENST00000574501 RASGEF1AQ8N9B8 481 aa13.42□□□□□ -0.26
SMG6-215ENST00000574501 FAM98AQ8NCA5 519 aaKnown RBP13.42□□□□□ -0.26
SMG6-215ENST00000574501 OR52I2Q8NH67 350 aa13.42□□□□□ -0.26
SMG6-215ENST00000574501 AUTS2Q8WXX7 1259 aa13.42□□□□□ -0.26
SMG6-215ENST00000574501 LCORQ96JN0 433 aaPredicted RBP13.42□□□□□ -0.26
SMG6-215ENST00000574501 F2RL3Q96RI0 385 aa13.42□□□□□ -0.26
SMG6-215ENST00000574501 IFT27Q9BW83 186 aa13.42□□□□□ -0.26
SMG6-215ENST00000574501 TEX12Q9BXU0 123 aa13.42□□□□□ -0.26
SMG6-215ENST00000574501 NEUROD4Q9HD90 331 aa13.42□□□□□ -0.26
SMG6-215ENST00000574501 EMC3Q9P0I2 261 aa13.42□□□□□ -0.26
SMG6-215ENST00000574501 MRTO4Q9UKD2 239 aaKnown RBP13.42□□□□□ -0.26
SMG6-215ENST00000574501 AK6Q9Y3D8 172 aaKnown RBP13.42□□□□□ -0.26
SMG6-215ENST00000574501 ARPC4-TTLL3A0A0A6YYG9 625 aa13.42□□□□□ -0.26
SMG6-215ENST00000574501 OR2M5A3KFT3 312 aa13.42□□□□□ -0.26
SMG6-215ENST00000574501 ABCD4O14678 606 aa13.42□□□□□ -0.26
SMG6-215ENST00000574501 EPXP11678 715 aa13.42□□□□□ -0.26
SMG6-215ENST00000574501 PNLIPRP1P54315 467 aa13.42□□□□□ -0.26
SMG6-215ENST00000574501 RAP2BP61225 183 aa13.42□□□□□ -0.26
SMG6-215ENST00000574501 ZNF613Q6PF04 617 aa13.42□□□□□ -0.26
SMG6-215ENST00000574501 HSD11B1LQ7Z5J1 315 aa13.42□□□□□ -0.26
SMG6-215ENST00000574501 SPICQ8N5J4 248 aa13.42□□□□□ -0.26
SMG6-215ENST00000574501 LINC00469Q8N7U9 141 aa13.42□□□□□ -0.26
SMG6-215ENST00000574501 FAM71CQ8NEG0 241 aa13.42□□□□□ -0.26
SMG6-215ENST00000574501 ZNF671Q8TAW3 534 aa13.42□□□□□ -0.26
SMG6-215ENST00000574501 PIGXQ8TBF5 258 aa13.42□□□□□ -0.26
SMG6-215ENST00000574501 C4orf36Q96KX1 117 aa13.42□□□□□ -0.26
SMG6-215ENST00000574501 ZNF768Q9H5H4 540 aaKnown RBP13.42□□□□□ -0.26
SMG6-215ENST00000574501 PCDHGA5Q9Y5G8 931 aa13.42□□□□□ -0.26
SMG6-215ENST00000574501 SIGLEC6O43699 453 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 C1orf105O95561 183 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 PPP3CBP16298 524 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 FUT1P19526 365 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 GCGRP47871 477 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 HOXA1P49639 335 aaPredicted RBP13.41□□□□□ -0.26
SMG6-215ENST00000574501 GATMP50440 423 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 PCBP4P57723 403 aaKnown RBP13.41□□□□□ -0.26
SMG6-215ENST00000574501 OR12D2P58182 307 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 RIPPLY1Q0D2K3 151 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 FUT5Q11128 374 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 LMAN2Q12907 356 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 PABPC1L2AQ5JQF8 200 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 C6orf132Q5T0Z8 1188 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 B3GNTL1Q67FW5 361 aaPredicted RBP13.41□□□□□ -0.26
SMG6-215ENST00000574501 ZNF660Q6AZW8 331 aaPredicted RBP13.41□□□□□ -0.26
SMG6-215ENST00000574501 KLHDC8AQ8IYD2 350 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 CMTM4Q8IZR5 234 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 HDDC3Q8N4P3 179 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 OR5M1Q8NGP8 315 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 LGALS14Q8TCE9 139 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 ELP4Q96EB1 424 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 RIOK2Q9BVS4 552 aaKnown RBP13.41□□□□□ -0.26
SMG6-215ENST00000574501 ANKRD19PQ9H560 264 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 ZCCHC3Q9NUD5 404 aaKnown RBP13.41□□□□□ -0.26
SMG6-215ENST00000574501 IL20Q9NYY1 176 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 NFKBIL1Q9UBC1 381 aaPredicted RBP13.41□□□□□ -0.26
SMG6-215ENST00000574501 ZMIZ1Q9ULJ6 1067 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 A0A0G2JN53 185 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 CDC42EP2O14613 210 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 PLPP2O43688 288 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 GSTZ1O43708 216 aaPredicted RBP13.41□□□□□ -0.26
SMG6-215ENST00000574501 HYAL3O43820 417 aaPredicted RBP13.41□□□□□ -0.26
SMG6-215ENST00000574501 CREBL2O60519 120 aaPredicted RBP13.41□□□□□ -0.26
SMG6-215ENST00000574501 KHDRBS3O75525 346 aaKnown RBP13.41□□□□□ -0.26
SMG6-215ENST00000574501 HPP00738 406 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 RLN2P04090 185 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 HIST1H2ABP04908 130 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 IFNGR1P15260 489 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 HMGA1P17096 107 aaKnown RBP13.41□□□□□ -0.26
SMG6-215ENST00000574501 CALCRP30988 508 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 UBE2MP61081 183 aaKnown RBP13.41□□□□□ -0.26
SMG6-215ENST00000574501 TRAM2Q15035 370 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 FAM110CQ1W6H9 321 aa13.41□□□□□ -0.26
SMG6-215ENST00000574501 C2orf68Q2NKX9 166 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms