RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 PRDX6P30041 224 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 PTGER4P35408 488 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 EIF1P41567 113 aaKnown RBP11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 CCR4P51679 360 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 KCNJ10P78508 379 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 ZNF117Q03924 483 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 RBBP4Q09028 425 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 CBFBQ13951 182 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 FGFBP1Q14512 234 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 LARS2Q15031 903 aaKnown RBP11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 CD226Q15762 336 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 C3AR1Q16581 482 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 CYP51A1Q16850 503 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 C1QL3Q5VWW1 255 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 VASNQ6EMK4 673 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 TMEM211Q6ICI0 200 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 FJX1Q86VR8 437 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 KRT73Q86Y46 540 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 SLC30A8Q8IWU4 369 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 CHERPQ8IWX8 916 aaKnown RBP11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 ANKS4BQ8N8V4 417 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 OR8J3Q8NGG0 315 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 BBS10Q8TAM1 723 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 WDR60Q8WVS4 1066 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 RELTQ969Z4 430 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 TMEM19Q96HH6 336 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 LRRC37BQ96QE4 947 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 TREX2Q9BQ50 279 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 ECSITQ9BQ95 431 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 CPPED1Q9BRF8 314 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 SPATA5L1Q9BVQ7 753 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 SPATA9Q9BWV2 254 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 LAT2Q9GZY6 243 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 TMEM38AQ9H6F2 299 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 EFCAB1Q9HAE3 211 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 ALKBH4Q9NXW9 302 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 SPRR3Q9UBC9 169 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 TINAGQ9UJW2 476 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 CARD8Q9Y2G2 431 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 RPH3AQ9Y2J0 694 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 SLC6A5Q9Y345 797 aa11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 PHF3Q92576 2039 aaKnown RBP11.59□□□□□ -0.55
TRAPPC1-206ENST00000573989 AHRRA9YTQ3 701 aa11.58□□□□□ -0.56
TRAPPC1-206ENST00000573989 E9PLN8 166 aa11.58□□□□□ -0.56
TRAPPC1-206ENST00000573989 ZIC3O60481 467 aa11.58□□□□□ -0.56
TRAPPC1-206ENST00000573989 SHOX2O60902 331 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC1-206ENST00000573989 CYP7B1O75881 506 aa11.58□□□□□ -0.56
TRAPPC1-206ENST00000573989 ZIC2O95409 532 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC1-206ENST00000573989 ARAFP10398 606 aa11.58□□□□□ -0.56
TRAPPC1-206ENST00000573989 PEPDP12955 493 aa11.58□□□□□ -0.56
TRAPPC1-206ENST00000573989 UQCRBP14927 111 aa11.58□□□□□ -0.56
TRAPPC1-206ENST00000573989 ZNF17P17021 662 aa11.58□□□□□ -0.56
TRAPPC1-206ENST00000573989 BMP7P18075 431 aa11.58□□□□□ -0.56
TRAPPC1-206ENST00000573989 MTPNP58546 118 aa11.58□□□□□ -0.56
TRAPPC1-206ENST00000573989 CDK6Q00534 326 aa11.58□□□□□ -0.56
TRAPPC1-206ENST00000573989 CRYZQ08257 329 aaKnown RBP11.58□□□□□ -0.56
TRAPPC1-206ENST00000573989 ART3Q13508 389 aa11.58□□□□□ -0.56
TRAPPC1-206ENST00000573989 LIN52Q52LA3 116 aa11.58□□□□□ -0.56
TRAPPC1-206ENST00000573989 NANOGP8Q6NSW7 305 aa11.58□□□□□ -0.56
TRAPPC1-206ENST00000573989 REEP3Q6NUK4 255 aa11.58□□□□□ -0.56
TRAPPC1-206ENST00000573989 ZNF585AQ6P3V2 769 aa11.58□□□□□ -0.56
TRAPPC1-206ENST00000573989 OLIG3Q7RTU3 272 aa11.58□□□□□ -0.56
TRAPPC1-206ENST00000573989 FGD2Q7Z6J4 655 aa11.58□□□□□ -0.56
TRAPPC1-206ENST00000573989 ARPINQ7Z6K5 226 aa11.58□□□□□ -0.56
TRAPPC1-206ENST00000573989 SERPINA11Q86U17 422 aa11.58□□□□□ -0.56
TRAPPC1-206ENST00000573989 DOLPP1Q86YN1 238 aa11.58□□□□□ -0.56
TRAPPC1-206ENST00000573989 POU5F2Q8N7G0 328 aa11.58□□□□□ -0.56
TRAPPC1-206ENST00000573989 C11orf65Q8NCR3 313 aa11.58□□□□□ -0.56
TRAPPC1-206ENST00000573989 OR5M9Q8NGP3 310 aa11.58□□□□□ -0.56
TRAPPC1-206ENST00000573989 OR52P1PQ8NH57 321 aa11.58□□□□□ -0.56
TRAPPC1-206ENST00000573989 OR5W2Q8NH69 310 aa11.58□□□□□ -0.56
TRAPPC1-206ENST00000573989 ZNF607Q96SK3 696 aa11.58□□□□□ -0.56
TRAPPC1-206ENST00000573989 TIMP4Q99727 224 aa11.58□□□□□ -0.56
TRAPPC1-206ENST00000573989 VKORC1Q9BQB6 163 aa11.58□□□□□ -0.56
TRAPPC1-206ENST00000573989 UGT2B28Q9BY64 529 aa11.58□□□□□ -0.56
TRAPPC1-206ENST00000573989 MYLK2Q9H1R3 596 aa11.58□□□□□ -0.56
TRAPPC1-206ENST00000573989 RUBCNLQ9H714 662 aa11.58□□□□□ -0.56
TRAPPC1-206ENST00000573989 NANOGQ9H9S0 305 aa11.58□□□□□ -0.56
TRAPPC1-206ENST00000573989 BCL2L10Q9HD36 194 aa11.58□□□□□ -0.56
TRAPPC1-206ENST00000573989 CAMK2AQ9UQM7 478 aa11.58□□□□□ -0.56
TRAPPC1-206ENST00000573989 ANGPT4Q9Y264 503 aa11.58□□□□□ -0.56
TRAPPC1-206ENST00000573989 VDAC3Q9Y277 283 aa11.58□□□□□ -0.56
TRAPPC1-206ENST00000573989 AP3M1Q9Y2T2 418 aa11.58□□□□□ -0.56
TRAPPC1-206ENST00000573989 L3MBTL1Q9Y468 752 aa11.58□□□□□ -0.56
TRAPPC1-206ENST00000573989 UBR5O95071 2799 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC1-206ENST00000573989 ARHGAP21Q5T5U3 1957 aa11.58□□□□□ -0.56
TRAPPC1-206ENST00000573989 GCN1Q92616 2671 aaKnown RBP11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 C17orf51A8MQB3 221 aa11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 NDUFAB1O14561 156 aa11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 ZNHIT1O43257 154 aa11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 NUDT7P0C024 238 aa11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 UBTFL6P0CB48 400 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 NID1P14543 1247 aa11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 ETS2P15036 469 aa11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 PGCP20142 388 aa11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 RPS4Y1P22090 263 aaKnown RBP11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 TCEA1P23193 301 aaKnown RBP11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 ME2P23368 584 aa11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 ACVR2AP27037 513 aa11.57□□□□□ -0.56
TRAPPC1-206ENST00000573989 ADH6P28332 368 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms