RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 PSMA4P25789 261 aaKnown RBP25.04■■□□□ 1.6
SCARF1-207ENST00000573867 ZNF141Q15928 474 aa25.04■■□□□ 1.6
SCARF1-207ENST00000573867 FRRS1Q6ZNA5 592 aa25.04■■□□□ 1.6
SCARF1-207ENST00000573867 MSANTD1Q6ZTZ1 278 aa25.04■■□□□ 1.6
SCARF1-207ENST00000573867 MTERF4Q7Z6M4 381 aaKnown RBP25.04■■□□□ 1.6
SCARF1-207ENST00000573867 TRIML2Q8N7C3 387 aa25.04■■□□□ 1.6
SCARF1-207ENST00000573867 POC1BQ8TC44 478 aa25.04■■□□□ 1.6
SCARF1-207ENST00000573867 UCN2Q96RP3 112 aa25.04■■□□□ 1.6
SCARF1-207ENST00000573867 KCNJ16Q9NPI9 418 aa25.04■■□□□ 1.6
SCARF1-207ENST00000573867 SLC52A3Q9NQ40 469 aa25.04■■□□□ 1.6
SCARF1-207ENST00000573867 ICAM5Q9UMF0 924 aa25.04■■□□□ 1.6
SCARF1-207ENST00000573867 ITPR2Q14571 2701 aa25.03■■□□□ 1.6
SCARF1-207ENST00000573867 A0A087WZY1 265 aa25.03■■□□□ 1.6
SCARF1-207ENST00000573867 HSPB2A8KAH6 182 aa25.03■■□□□ 1.6
SCARF1-207ENST00000573867 AGR2O95994 175 aa25.03■■□□□ 1.6
SCARF1-207ENST00000573867 SF3B4Q15427 424 aaKnown RBP eCLIP25.03■■□□□ 1.64e-7■■■■■ 28.1
SCARF1-207ENST00000573867 HSPB2Q16082 182 aa25.03■■□□□ 1.6
SCARF1-207ENST00000573867 ATAD3BQ5T9A4 648 aa25.03■■□□□ 1.6
SCARF1-207ENST00000573867 AP1ARQ63HQ0 302 aa25.03■■□□□ 1.6
SCARF1-207ENST00000573867 SLC2A7Q6PXP3 512 aa25.03■■□□□ 1.6
SCARF1-207ENST00000573867 HMGN2P46Q86SG4 172 aa25.03■■□□□ 1.6
SCARF1-207ENST00000573867 GTPBP8Q8N3Z3 284 aaPredicted RBP25.03■■□□□ 1.6
SCARF1-207ENST00000573867 ANKFN1Q8N957 763 aa25.03■■□□□ 1.6
SCARF1-207ENST00000573867 GTF2H4Q92759 462 aa25.03■■□□□ 1.6
SCARF1-207ENST00000573867 ZG16BQ96DA0 208 aa25.03■■□□□ 1.6
SCARF1-207ENST00000573867 ARSGQ96EG1 525 aa25.03■■□□□ 1.6
SCARF1-207ENST00000573867 AURKBQ96GD4 344 aaPredicted RBP25.03■■□□□ 1.6
SCARF1-207ENST00000573867 SAP130Q9H0E3 1048 aa25.03■■□□□ 1.6
SCARF1-207ENST00000573867 ENKD1Q9H0I2 346 aa25.03■■□□□ 1.6
SCARF1-207ENST00000573867 HHATLQ9HCP6 504 aa25.03■■□□□ 1.6
SCARF1-207ENST00000573867 DCHS2Q6V1P9 2916 aa25.03■■□□□ 1.6
SCARF1-207ENST00000573867 SERINC4A6NH21 518 aa25.02■■□□□ 1.6
SCARF1-207ENST00000573867 SEC14L5O43304 696 aa25.02■■□□□ 1.6
SCARF1-207ENST00000573867 LINGO3P0C6S8 592 aa25.02■■□□□ 1.6
SCARF1-207ENST00000573867 ZCCHC18P0CG32 403 aa25.02■■□□□ 1.6
SCARF1-207ENST00000573867 ZNF17P17021 662 aa25.02■■□□□ 1.6
SCARF1-207ENST00000573867 HOXB9P17482 250 aaPredicted RBP25.02■■□□□ 1.6
SCARF1-207ENST00000573867 IGFBP2P18065 325 aa25.02■■□□□ 1.6
SCARF1-207ENST00000573867 STX1BP61266 288 aa25.02■■□□□ 1.6
SCARF1-207ENST00000573867 TOMM34Q15785 309 aaPredicted RBP25.02■■□□□ 1.6
SCARF1-207ENST00000573867 SYPL1Q16563 259 aa25.02■■□□□ 1.6
SCARF1-207ENST00000573867 GGNQ86UU5 652 aa25.02■■□□□ 1.6
SCARF1-207ENST00000573867 SMPDL3BQ92485 455 aa25.02■■□□□ 1.6
SCARF1-207ENST00000573867 ITCHQ96J02 903 aa25.02■■□□□ 1.6
SCARF1-207ENST00000573867 RNF145Q96MT1 663 aa25.02■■□□□ 1.6
SCARF1-207ENST00000573867 TREX2Q9BQ50 279 aaPredicted RBP25.02■■□□□ 1.6
SCARF1-207ENST00000573867 PAIP1Q9H074 479 aaKnown RBP25.02■■□□□ 1.6
SCARF1-207ENST00000573867 NPHS2Q9NP85 383 aa25.02■■□□□ 1.6
SCARF1-207ENST00000573867 DCTN4Q9UJW0 460 aa25.02■■□□□ 1.6
SCARF1-207ENST00000573867 WDR45Q9Y484 360 aa25.02■■□□□ 1.6
SCARF1-207ENST00000573867 C7orf72A4D263 438 aa25.01■■□□□ 1.59
SCARF1-207ENST00000573867 BCAS1O75363 584 aaPredicted RBP25.01■■□□□ 1.59
SCARF1-207ENST00000573867 TGM6O95932 706 aa25.01■■□□□ 1.59
SCARF1-207ENST00000573867 IL2RAP01589 272 aa25.01■■□□□ 1.59
SCARF1-207ENST00000573867 CHRM4P08173 479 aa25.01■■□□□ 1.59
SCARF1-207ENST00000573867 GUSBP08236 651 aa25.01■■□□□ 1.59
SCARF1-207ENST00000573867 P2RX1P51575 399 aa25.01■■□□□ 1.59
SCARF1-207ENST00000573867 CHRNEQ04844 493 aa25.01■■□□□ 1.59
SCARF1-207ENST00000573867 FOXF2Q12947 444 aa25.01■■□□□ 1.59
SCARF1-207ENST00000573867 MAPK11Q15759 364 aa25.01■■□□□ 1.59
SCARF1-207ENST00000573867 STON2Q8WXE9 905 aa25.01■■□□□ 1.59
SCARF1-207ENST00000573867 QRSL1Q9H0R6 528 aaKnown RBP25.01■■□□□ 1.59
SCARF1-207ENST00000573867 RMND5AQ9H871 391 aa25.01■■□□□ 1.59
SCARF1-207ENST00000573867 L3MBTL1Q9Y468 752 aa25.01■■□□□ 1.59
SCARF1-207ENST00000573867 AP4B1Q9Y6B7 739 aa25.01■■□□□ 1.59
SCARF1-207ENST00000573867 HCFC1P51610 2035 aa25.01■■□□□ 1.59
SCARF1-207ENST00000573867 H3BNH8 94 aa25■■□□□ 1.59
SCARF1-207ENST00000573867 LINC01387J3KSC0 135 aa25■■□□□ 1.59
SCARF1-207ENST00000573867 GTPBP1O00178 669 aaKnown RBP25■■□□□ 1.59
SCARF1-207ENST00000573867 H6PDO95479 791 aa25■■□□□ 1.59
SCARF1-207ENST00000573867 UBL4AP11441 157 aa25■■□□□ 1.59
SCARF1-207ENST00000573867 COX6B1P14854 86 aa25■■□□□ 1.59
SCARF1-207ENST00000573867 CAPN3P20807 821 aa25■■□□□ 1.59
SCARF1-207ENST00000573867 IL11P20809 199 aa25■■□□□ 1.59
SCARF1-207ENST00000573867 BMP5P22003 454 aa25■■□□□ 1.59
SCARF1-207ENST00000573867 ZNF41P51814 821 aaPredicted RBP25■■□□□ 1.59
SCARF1-207ENST00000573867 AGFG1P52594 562 aaKnown RBP25■■□□□ 1.59
SCARF1-207ENST00000573867 PLAURQ03405 335 aa25■■□□□ 1.59
SCARF1-207ENST00000573867 FOXF1Q12946 379 aa25■■□□□ 1.59
SCARF1-207ENST00000573867 GPAT3Q53EU6 434 aa25■■□□□ 1.59
SCARF1-207ENST00000573867 BLOC1S3Q6QNY0 202 aa25■■□□□ 1.59
SCARF1-207ENST00000573867 ZNF619Q8N2I2 560 aa25■■□□□ 1.59
SCARF1-207ENST00000573867 GPR119Q8TDV5 335 aa25■■□□□ 1.59
SCARF1-207ENST00000573867 WNT2BQ93097 391 aa25■■□□□ 1.59
SCARF1-207ENST00000573867 ZBTB8AQ96BR9 441 aa25■■□□□ 1.59
SCARF1-207ENST00000573867 SLC38A1Q9H2H9 487 aa25■■□□□ 1.59
SCARF1-207ENST00000573867 ZNF385DQ9H6B1 395 aa25■■□□□ 1.59
SCARF1-207ENST00000573867 RUBCNLQ9H714 662 aa25■■□□□ 1.59
SCARF1-207ENST00000573867 POLE3Q9NRF9 147 aa25■■□□□ 1.59
SCARF1-207ENST00000573867 CCDC167Q9P0B6 97 aa25■■□□□ 1.59
SCARF1-207ENST00000573867 NR5A2O00482 541 aa24.99■■□□□ 1.59
SCARF1-207ENST00000573867 ETFAP13804 333 aa24.99■■□□□ 1.59
SCARF1-207ENST00000573867 ATP4BP51164 291 aa24.99■■□□□ 1.59
SCARF1-207ENST00000573867 SKP2Q13309 424 aa24.99■■□□□ 1.59
SCARF1-207ENST00000573867 SLC25A35Q3KQZ1 300 aa24.99■■□□□ 1.59
SCARF1-207ENST00000573867 C6orf10Q5SRN2 563 aa24.99■■□□□ 1.59
SCARF1-207ENST00000573867 MEIOBQ8N635 442 aa24.99■■□□□ 1.59
SCARF1-207ENST00000573867 FIG4Q92562 907 aa24.99■■□□□ 1.59
SCARF1-207ENST00000573867 ZNF845Q96IR2 970 aaPredicted RBP24.99■■□□□ 1.59
SCARF1-207ENST00000573867 DOCK7Q96N67 2140 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms