RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 OR14L1PQ8NHC6 308 aa12.3□□□□□ -0.44
RPAIN-213ENST00000573577 NEIL3Q8TAT5 605 aa12.3□□□□□ -0.44
RPAIN-213ENST00000573577 PHF10Q8WUB8 498 aaKnown RBP12.3□□□□□ -0.44
RPAIN-213ENST00000573577 SLC38A5Q8WUX1 472 aa12.3□□□□□ -0.44
RPAIN-213ENST00000573577 SARAFQ96BY9 339 aa12.3□□□□□ -0.44
RPAIN-213ENST00000573577 DMRTA2Q96SC8 542 aa12.3□□□□□ -0.44
RPAIN-213ENST00000573577 KRTAP3-3Q9BYR6 98 aa12.3□□□□□ -0.44
RPAIN-213ENST00000573577 KRTAP3-2Q9BYR7 98 aa12.3□□□□□ -0.44
RPAIN-213ENST00000573577 OR2B2Q9GZK3 357 aa12.3□□□□□ -0.44
RPAIN-213ENST00000573577 SLC38A1Q9H2H9 487 aa12.3□□□□□ -0.44
RPAIN-213ENST00000573577 SLC6A15Q9H2J7 730 aa12.3□□□□□ -0.44
RPAIN-213ENST00000573577 TP63Q9H3D4 680 aaPredicted RBP12.3□□□□□ -0.44
RPAIN-213ENST00000573577 DSN1Q9H410 356 aa12.3□□□□□ -0.44
RPAIN-213ENST00000573577 TMEM38AQ9H6F2 299 aa12.3□□□□□ -0.44
RPAIN-213ENST00000573577 EFCAB1Q9HAE3 211 aa12.3□□□□□ -0.44
RPAIN-213ENST00000573577 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.3□□□□□ -0.44
RPAIN-213ENST00000573577 MED11Q9P086 117 aa12.3□□□□□ -0.44
RPAIN-213ENST00000573577 TNFRSF10DQ9UBN6 386 aa12.3□□□□□ -0.44
RPAIN-213ENST00000573577 FBXL2Q9UKC9 423 aa12.3□□□□□ -0.44
RPAIN-213ENST00000573577 SLC35A3Q9Y2D2 325 aa12.3□□□□□ -0.44
RPAIN-213ENST00000573577 HRH3Q9Y5N1 445 aa12.3□□□□□ -0.44
RPAIN-213ENST00000573577 DIDO1Q9BTC0 2240 aaKnown RBP12.3□□□□□ -0.44
RPAIN-213ENST00000573577 ICE1Q9Y2F5 2266 aa12.3□□□□□ -0.44
RPAIN-213ENST00000573577 C15orf38-AP3S2A0A0A6YYH1 394 aa12.29□□□□□ -0.44
RPAIN-213ENST00000573577 A0A0G2JPF8 293 aa12.29□□□□□ -0.44
RPAIN-213ENST00000573577 HNRNPCL2B2RXH8 293 aa12.29□□□□□ -0.44
RPAIN-213ENST00000573577 HNRNPCL3B7ZW38 293 aa12.29□□□□□ -0.44
RPAIN-213ENST00000573577 NDUFAB1O14561 156 aa12.29□□□□□ -0.44
RPAIN-213ENST00000573577 HCRTR2O43614 444 aa12.29□□□□□ -0.44
RPAIN-213ENST00000573577 EIF4E2O60573 245 aaKnown RBP12.29□□□□□ -0.44
RPAIN-213ENST00000573577 HNRNPCL1O60812 293 aaKnown RBP12.29□□□□□ -0.44
RPAIN-213ENST00000573577 HNRNPCL4P0DMR1 293 aa12.29□□□□□ -0.44
RPAIN-213ENST00000573577 ARAFP10398 606 aa12.29□□□□□ -0.44
RPAIN-213ENST00000573577 UBL4AP11441 157 aa12.29□□□□□ -0.44
RPAIN-213ENST00000573577 SLC6A2P23975 617 aa12.29□□□□□ -0.44
RPAIN-213ENST00000573577 ADH7P40394 386 aa12.29□□□□□ -0.44
RPAIN-213ENST00000573577 SMSP52788 366 aa12.29□□□□□ -0.44
RPAIN-213ENST00000573577 SUMO3P55854 103 aaPredicted RBP12.29□□□□□ -0.44
RPAIN-213ENST00000573577 MTPNP58546 118 aa12.29□□□□□ -0.44
RPAIN-213ENST00000573577 ART3Q13508 389 aa12.29□□□□□ -0.44
RPAIN-213ENST00000573577 CAPRIN1Q14444 709 aaKnown RBP12.29□□□□□ -0.44
RPAIN-213ENST00000573577 CYP51A1Q16850 503 aa12.29□□□□□ -0.44
RPAIN-213ENST00000573577 GXYLT1Q4G148 440 aa12.29□□□□□ -0.44
RPAIN-213ENST00000573577 NANOGP8Q6NSW7 305 aa12.29□□□□□ -0.44
RPAIN-213ENST00000573577 NCCRP1Q6ZVX7 275 aaPredicted RBP12.29□□□□□ -0.44
RPAIN-213ENST00000573577 ARPINQ7Z6K5 226 aa12.29□□□□□ -0.44
RPAIN-213ENST00000573577 IFNEQ86WN2 208 aa12.29□□□□□ -0.44
RPAIN-213ENST00000573577 TREML1Q86YW5 311 aa12.29□□□□□ -0.44
RPAIN-213ENST00000573577 CMIPQ8IY22 773 aa12.29□□□□□ -0.44
RPAIN-213ENST00000573577 OR5M9Q8NGP3 310 aa12.29□□□□□ -0.44
RPAIN-213ENST00000573577 B4GALNT2Q8NHY0 566 aa12.29□□□□□ -0.44
RPAIN-213ENST00000573577 BBS10Q8TAM1 723 aa12.29□□□□□ -0.44
RPAIN-213ENST00000573577 RCN3Q96D15 328 aa12.29□□□□□ -0.44
RPAIN-213ENST00000573577 TMEM19Q96HH6 336 aa12.29□□□□□ -0.44
RPAIN-213ENST00000573577 TREX2Q9BQ50 279 aaPredicted RBP12.29□□□□□ -0.44
RPAIN-213ENST00000573577 SPATA9Q9BWV2 254 aa12.29□□□□□ -0.44
RPAIN-213ENST00000573577 RTN4RQ9BZR6 473 aa12.29□□□□□ -0.44
RPAIN-213ENST00000573577 IKZF5Q9H5V7 419 aa12.29□□□□□ -0.44
RPAIN-213ENST00000573577 ARMC7Q9H6L4 198 aa12.29□□□□□ -0.44
RPAIN-213ENST00000573577 NANOGQ9H9S0 305 aa12.29□□□□□ -0.44
RPAIN-213ENST00000573577 BCL2L10Q9HD36 194 aa12.29□□□□□ -0.44
RPAIN-213ENST00000573577 PNPLA3Q9NST1 481 aa12.29□□□□□ -0.44
RPAIN-213ENST00000573577 TAS2R10Q9NYW0 307 aa12.29□□□□□ -0.44
RPAIN-213ENST00000573577 SPRR3Q9UBC9 169 aa12.29□□□□□ -0.44
RPAIN-213ENST00000573577 ACAD8Q9UKU7 415 aa12.29□□□□□ -0.44
RPAIN-213ENST00000573577 AP3M1Q9Y2T2 418 aa12.29□□□□□ -0.44
RPAIN-213ENST00000573577 A0A087WZY1 265 aa12.28□□□□□ -0.44
RPAIN-213ENST00000573577 AGAP5A6NIR3 686 aa12.28□□□□□ -0.44
RPAIN-213ENST00000573577 FIGNL2A6NMB9 653 aa12.28□□□□□ -0.44
RPAIN-213ENST00000573577 LINC01387J3KSC0 135 aa12.28□□□□□ -0.44
RPAIN-213ENST00000573577 AIM2O14862 343 aa12.28□□□□□ -0.44
RPAIN-213ENST00000573577 ZNF264O43296 627 aa12.28□□□□□ -0.44
RPAIN-213ENST00000573577 CSTAP01040 98 aa12.28□□□□□ -0.44
RPAIN-213ENST00000573577 DBIP07108 87 aaKnown RBP12.28□□□□□ -0.44
RPAIN-213ENST00000573577 IL7RP16871 459 aa12.28□□□□□ -0.44
RPAIN-213ENST00000573577 AGAP20933 346 aa12.28□□□□□ -0.44
RPAIN-213ENST00000573577 P2RX1P51575 399 aa12.28□□□□□ -0.44
RPAIN-213ENST00000573577 ZNF41P51814 821 aaPredicted RBP12.28□□□□□ -0.44
RPAIN-213ENST00000573577 CDK6Q00534 326 aa12.28□□□□□ -0.44
RPAIN-213ENST00000573577 RBBP4Q09028 425 aa12.28□□□□□ -0.44
RPAIN-213ENST00000573577 FGFBP1Q14512 234 aa12.28□□□□□ -0.44
RPAIN-213ENST00000573577 LARS2Q15031 903 aaKnown RBP12.28□□□□□ -0.44
RPAIN-213ENST00000573577 CD226Q15762 336 aa12.28□□□□□ -0.44
RPAIN-213ENST00000573577 ZSWIM7Q19AV6 140 aa12.28□□□□□ -0.44
RPAIN-213ENST00000573577 GLYR1Q49A26 553 aaPredicted RBP12.28□□□□□ -0.44
RPAIN-213ENST00000573577 EIPR1Q53HC9 387 aa12.28□□□□□ -0.44
RPAIN-213ENST00000573577 WLSQ5T9L3 541 aa12.28□□□□□ -0.44
RPAIN-213ENST00000573577 HIST2H2BCQ6DN03 193 aa12.28□□□□□ -0.44
RPAIN-213ENST00000573577 REEP3Q6NUK4 255 aa12.28□□□□□ -0.44
RPAIN-213ENST00000573577 AAGABQ6PD74 315 aa12.28□□□□□ -0.44
RPAIN-213ENST00000573577 XKRXQ6PP77 449 aa12.28□□□□□ -0.44
RPAIN-213ENST00000573577 OLIG3Q7RTU3 272 aa12.28□□□□□ -0.44
RPAIN-213ENST00000573577 SERPINA11Q86U17 422 aa12.28□□□□□ -0.44
RPAIN-213ENST00000573577 YRDCQ86U90 279 aaKnown RBP12.28□□□□□ -0.44
RPAIN-213ENST00000573577 KRT73Q86Y46 540 aa12.28□□□□□ -0.44
RPAIN-213ENST00000573577 SLC30A8Q8IWU4 369 aa12.28□□□□□ -0.44
RPAIN-213ENST00000573577 TMCO5AQ8N6Q1 288 aa12.28□□□□□ -0.44
RPAIN-213ENST00000573577 C11orf65Q8NCR3 313 aa12.28□□□□□ -0.44
RPAIN-213ENST00000573577 TOR1AIP2Q8NFQ8 470 aa12.28□□□□□ -0.44
RPAIN-213ENST00000573577 BCAS4Q8TDM0 211 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms