RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 MMP11P24347 488 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 TEAD1P28347 426 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 EEF1DP29692 281 aaKnown RBP4.85□□□□□ -1.63
SF3B3-214ENST00000572365 PRDX3P30048 256 aaKnown RBP4.85□□□□□ -1.63
SF3B3-214ENST00000572365 STC1P52823 247 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 YBEYP58557 167 aaPredicted RBP4.85□□□□□ -1.63
SF3B3-214ENST00000572365 BRWD1-AS2P59051 145 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 GCNT1Q02742 428 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 ENPEPQ07075 957 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 NFE2L1Q14494 772 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 ZIC1Q15915 447 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 RBBP7Q16576 425 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 CA9Q16790 459 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 MEP1AQ16819 746 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 KRTAP24-1Q3LI83 254 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 PARP15Q460N3 678 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 FAM98BQ52LJ0 330 aaKnown RBP4.85□□□□□ -1.63
SF3B3-214ENST00000572365 SPINK14Q6IE38 97 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 ABRAXAS1Q6UWZ7 409 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 C9orf47Q6ZRZ4 202 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 ZNF534Q76KX8 674 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 BNIPLQ7Z465 357 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 SLFN11Q7Z7L1 901 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 GPR180Q86V85 440 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 TRAPPC5Q8IUR0 188 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.85□□□□□ -1.63
SF3B3-214ENST00000572365 PM20D2Q8IYS1 436 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 ST13P4Q8IZP2 240 aaPredicted RBP4.85□□□□□ -1.63
SF3B3-214ENST00000572365 ARHGAP24Q8N264 748 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 SLC35F6Q8N357 371 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 NPWQ8N729 165 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 ZNF114Q8NC26 417 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 OR10S1Q8NGN2 331 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 SPATA22Q8NHS9 363 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 HAS2Q92819 552 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 SCMH1Q96GD3 660 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 GPR137Q96N19 417 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 SIGLEC12Q96PQ1 595 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 MTERF1Q99551 399 aaKnown RBP4.85□□□□□ -1.63
SF3B3-214ENST00000572365 RAB33BQ9H082 229 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 WWP1Q9H0M0 922 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 CARD9Q9H257 536 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 MAGEF1Q9HAY2 307 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 NT5MQ9NPB1 228 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 FAM114A2Q9NRY5 505 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 TAS2R14Q9NYV8 317 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 RCC2Q9P258 522 aaKnown RBP4.85□□□□□ -1.63
SF3B3-214ENST00000572365 CTSFQ9UBX1 484 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 L3MBTL1Q9Y468 752 aa4.85□□□□□ -1.63
SF3B3-214ENST00000572365 TENM1Q9UKZ4 2725 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 C1orf232A0A0U1RR37 186 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 A0A1B0GTH9 108 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 TRBC2A0A5B9 178 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 OR2AG2A6NM03 316 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 J3QR06 171 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 KMOO15229 486 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 SLC16A5O15375 505 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 POP7O75817 140 aaKnown RBP4.84□□□□□ -1.63
SF3B3-214ENST00000572365 CDK14O94921 469 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 TSPAN12O95859 305 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 IGHEP01854 428 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 RAF1P04049 648 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 PRSS2P07478 247 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 MYBL1P10243 752 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 VPREB1P12018 145 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 ZNF12P17014 697 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 S1PR1P21453 382 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 NMBRP28336 390 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 VHLP40337 213 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 SYKP43405 635 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 SPINT3P49223 89 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 RAD23AP54725 363 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 NUP107P57740 925 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 TPI1P60174 286 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 AP1S1P61966 158 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 FKBP3Q00688 224 aaKnown RBP4.84□□□□□ -1.63
SF3B3-214ENST00000572365 EGR4Q05215 589 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 ZNF33BQ06732 778 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 KRTAP1-1Q07627 177 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 ZNF155Q12901 538 aaPredicted RBP4.84□□□□□ -1.63
SF3B3-214ENST00000572365 PNOCQ13519 176 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 FASTKQ14296 549 aaKnown RBP4.84□□□□□ -1.63
SF3B3-214ENST00000572365 KRT33BQ14525 404 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 RCN1Q15293 331 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 ZNF628Q5EBL2 1059 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 ZDHHC20Q5W0Z9 365 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 AWAT2Q6E213 333 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 C8orf74Q6P047 294 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 ARSKQ6UWY0 536 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 Q6ZPB1 254 aaPredicted RBP4.84□□□□□ -1.63
SF3B3-214ENST00000572365 C3orf62Q6ZUJ4 267 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 DET1Q7L5Y6 550 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 TRPM8Q7Z2W7 1104 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 OOSP2Q86WS3 158 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 KMT5CQ86Y97 462 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 UMODL1-AS1Q8N2C9 162 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 GPR26Q8NDV2 337 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 LPCAT1Q8NF37 534 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 OR5M9Q8NGP3 310 aa4.84□□□□□ -1.63
SF3B3-214ENST00000572365 GDAP1Q8TB36 358 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms