RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 UGT2B17O75795 530 aa12.1□□□□□ -0.47
RPAIN-207ENST00000570883 ZNF17P17021 662 aa12.1□□□□□ -0.47
RPAIN-207ENST00000570883 HOXB9P17482 250 aaPredicted RBP12.1□□□□□ -0.47
RPAIN-207ENST00000570883 IGFBP2P18065 325 aa12.1□□□□□ -0.47
RPAIN-207ENST00000570883 PSMA4P25789 261 aaKnown RBP12.1□□□□□ -0.47
RPAIN-207ENST00000570883 MSX1P28360 303 aa12.1□□□□□ -0.47
RPAIN-207ENST00000570883 ZNF136P52737 540 aa12.1□□□□□ -0.47
RPAIN-207ENST00000570883 CLDN20P56880 219 aa12.1□□□□□ -0.47
RPAIN-207ENST00000570883 GPR68Q15743 365 aa12.1□□□□□ -0.47
RPAIN-207ENST00000570883 ZNF141Q15928 474 aa12.1□□□□□ -0.47
RPAIN-207ENST00000570883 MAPK14Q16539 360 aa12.1□□□□□ -0.47
RPAIN-207ENST00000570883 GLYR1Q49A26 553 aaPredicted RBP12.1□□□□□ -0.47
RPAIN-207ENST00000570883 TYW3Q6IPR3 259 aaKnown RBP12.1□□□□□ -0.47
RPAIN-207ENST00000570883 FRRS1Q6ZNA5 592 aa12.1□□□□□ -0.47
RPAIN-207ENST00000570883 ZNF621Q6ZSS3 439 aa12.1□□□□□ -0.47
RPAIN-207ENST00000570883 MSANTD1Q6ZTZ1 278 aa12.1□□□□□ -0.47
RPAIN-207ENST00000570883 MTERF4Q7Z6M4 381 aaKnown RBP12.1□□□□□ -0.47
RPAIN-207ENST00000570883 GGNQ86UU5 652 aa12.1□□□□□ -0.47
RPAIN-207ENST00000570883 FUNDC1Q8IVP5 155 aa12.1□□□□□ -0.47
RPAIN-207ENST00000570883 UBQLNLQ8IYU4 475 aa12.1□□□□□ -0.47
RPAIN-207ENST00000570883 GTPBP8Q8N3Z3 284 aaPredicted RBP12.1□□□□□ -0.47
RPAIN-207ENST00000570883 TRIML2Q8N7C3 387 aa12.1□□□□□ -0.47
RPAIN-207ENST00000570883 ZNF614Q8N883 585 aa12.1□□□□□ -0.47
RPAIN-207ENST00000570883 B4GALNT2Q8NHY0 566 aa12.1□□□□□ -0.47
RPAIN-207ENST00000570883 RFWD2Q8NHY2 731 aa12.1□□□□□ -0.47
RPAIN-207ENST00000570883 POC1BQ8TC44 478 aa12.1□□□□□ -0.47
RPAIN-207ENST00000570883 ZFP90Q8TF47 636 aa12.1□□□□□ -0.47
RPAIN-207ENST00000570883 ROPN1LQ96C74 230 aa12.1□□□□□ -0.47
RPAIN-207ENST00000570883 ARSGQ96EG1 525 aa12.1□□□□□ -0.47
RPAIN-207ENST00000570883 UCN2Q96RP3 112 aa12.1□□□□□ -0.47
RPAIN-207ENST00000570883 TREX2Q9BQ50 279 aaPredicted RBP12.1□□□□□ -0.47
RPAIN-207ENST00000570883 PIGQQ9BRB3 760 aa12.1□□□□□ -0.47
RPAIN-207ENST00000570883 CALHM2Q9HA72 323 aa12.1□□□□□ -0.47
RPAIN-207ENST00000570883 HHATLQ9HCP6 504 aa12.1□□□□□ -0.47
RPAIN-207ENST00000570883 SLC52A3Q9NQ40 469 aa12.1□□□□□ -0.47
RPAIN-207ENST00000570883 EXD2Q9NVH0 621 aa12.1□□□□□ -0.47
RPAIN-207ENST00000570883 ICAM5Q9UMF0 924 aa12.1□□□□□ -0.47
RPAIN-207ENST00000570883 CARD8Q9Y2G2 431 aa12.1□□□□□ -0.47
RPAIN-207ENST00000570883 DTNAQ9Y4J8 743 aa12.1□□□□□ -0.47
RPAIN-207ENST00000570883 A0A087WZY1 265 aa12.09□□□□□ -0.47
RPAIN-207ENST00000570883 UQCRHLA0A096LP55 91 aa12.09□□□□□ -0.47
RPAIN-207ENST00000570883 SERINC4A6NH21 518 aa12.09□□□□□ -0.47
RPAIN-207ENST00000570883 HSPB2A8KAH6 182 aa12.09□□□□□ -0.47
RPAIN-207ENST00000570883 SEC14L5O43304 696 aa12.09□□□□□ -0.47
RPAIN-207ENST00000570883 BCAS1O75363 584 aaPredicted RBP12.09□□□□□ -0.47
RPAIN-207ENST00000570883 AGR2O95994 175 aa12.09□□□□□ -0.47
RPAIN-207ENST00000570883 CHRM4P08173 479 aa12.09□□□□□ -0.47
RPAIN-207ENST00000570883 GUSBP08236 651 aa12.09□□□□□ -0.47
RPAIN-207ENST00000570883 LINGO3P0C6S8 592 aa12.09□□□□□ -0.47
RPAIN-207ENST00000570883 ZCCHC18P0CG32 403 aa12.09□□□□□ -0.47
RPAIN-207ENST00000570883 PEPDP12955 493 aa12.09□□□□□ -0.47
RPAIN-207ENST00000570883 ZNF41P51814 821 aaPredicted RBP12.09□□□□□ -0.47
RPAIN-207ENST00000570883 STX1BP61266 288 aa12.09□□□□□ -0.47
RPAIN-207ENST00000570883 PLAURQ03405 335 aa12.09□□□□□ -0.47
RPAIN-207ENST00000570883 FOXF1Q12946 379 aa12.09□□□□□ -0.47
RPAIN-207ENST00000570883 SKP2Q13309 424 aa12.09□□□□□ -0.47
RPAIN-207ENST00000570883 SF3B4Q15427 424 aaKnown RBP eCLIP12.09□□□□□ -0.47
RPAIN-207ENST00000570883 HSPB2Q16082 182 aa12.09□□□□□ -0.47
RPAIN-207ENST00000570883 ATAD3BQ5T9A4 648 aa12.09□□□□□ -0.47
RPAIN-207ENST00000570883 AP1ARQ63HQ0 302 aa12.09□□□□□ -0.47
RPAIN-207ENST00000570883 SLC2A7Q6PXP3 512 aa12.09□□□□□ -0.47
RPAIN-207ENST00000570883 HMGN2P46Q86SG4 172 aa12.09□□□□□ -0.47
RPAIN-207ENST00000570883 ANKFN1Q8N957 763 aa12.09□□□□□ -0.47
RPAIN-207ENST00000570883 STON2Q8WXE9 905 aa12.09□□□□□ -0.47
RPAIN-207ENST00000570883 GTF2H4Q92759 462 aa12.09□□□□□ -0.47
RPAIN-207ENST00000570883 ZG16BQ96DA0 208 aa12.09□□□□□ -0.47
RPAIN-207ENST00000570883 AURKBQ96GD4 344 aaPredicted RBP12.09□□□□□ -0.47
RPAIN-207ENST00000570883 RNF145Q96MT1 663 aa12.09□□□□□ -0.47
RPAIN-207ENST00000570883 TRIM8Q9BZR9 551 aa12.09□□□□□ -0.47
RPAIN-207ENST00000570883 PAIP1Q9H074 479 aaKnown RBP12.09□□□□□ -0.47
RPAIN-207ENST00000570883 SAP130Q9H0E3 1048 aa12.09□□□□□ -0.47
RPAIN-207ENST00000570883 ENKD1Q9H0I2 346 aa12.09□□□□□ -0.47
RPAIN-207ENST00000570883 ZNF385DQ9H6B1 395 aa12.09□□□□□ -0.47
RPAIN-207ENST00000570883 NPHS2Q9NP85 383 aa12.09□□□□□ -0.47
RPAIN-207ENST00000570883 KCNJ16Q9NPI9 418 aa12.09□□□□□ -0.47
RPAIN-207ENST00000570883 POLE3Q9NRF9 147 aa12.09□□□□□ -0.47
RPAIN-207ENST00000570883 L3MBTL1Q9Y468 752 aa12.09□□□□□ -0.47
RPAIN-207ENST00000570883 WDR45Q9Y484 360 aa12.09□□□□□ -0.47
RPAIN-207ENST00000570883 FREM1Q5H8C1 2179 aa12.09□□□□□ -0.47
RPAIN-207ENST00000570883 H3BNH8 94 aa12.08□□□□□ -0.48
RPAIN-207ENST00000570883 LINC01387J3KSC0 135 aa12.08□□□□□ -0.48
RPAIN-207ENST00000570883 NR5A2O00482 541 aa12.08□□□□□ -0.48
RPAIN-207ENST00000570883 H6PDO95479 791 aa12.08□□□□□ -0.48
RPAIN-207ENST00000570883 TGM6O95932 706 aa12.08□□□□□ -0.48
RPAIN-207ENST00000570883 IL2RAP01589 272 aa12.08□□□□□ -0.48
RPAIN-207ENST00000570883 UBL4AP11441 157 aa12.08□□□□□ -0.48
RPAIN-207ENST00000570883 COX6B1P14854 86 aa12.08□□□□□ -0.48
RPAIN-207ENST00000570883 CAPN3P20807 821 aa12.08□□□□□ -0.48
RPAIN-207ENST00000570883 IL11P20809 199 aa12.08□□□□□ -0.48
RPAIN-207ENST00000570883 BMP5P22003 454 aa12.08□□□□□ -0.48
RPAIN-207ENST00000570883 P2RX1P51575 399 aa12.08□□□□□ -0.48
RPAIN-207ENST00000570883 SUMO3P55854 103 aaPredicted RBP12.08□□□□□ -0.48
RPAIN-207ENST00000570883 CHRNEQ04844 493 aa12.08□□□□□ -0.48
RPAIN-207ENST00000570883 FOXF2Q12947 444 aa12.08□□□□□ -0.48
RPAIN-207ENST00000570883 MAPK11Q15759 364 aa12.08□□□□□ -0.48
RPAIN-207ENST00000570883 TOMM34Q15785 309 aaPredicted RBP12.08□□□□□ -0.48
RPAIN-207ENST00000570883 SYPL1Q16563 259 aa12.08□□□□□ -0.48
RPAIN-207ENST00000570883 SLC25A35Q3KQZ1 300 aa12.08□□□□□ -0.48
RPAIN-207ENST00000570883 C6orf10Q5SRN2 563 aa12.08□□□□□ -0.48
RPAIN-207ENST00000570883 BLOC1S3Q6QNY0 202 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms