RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 FEM1AQ9BSK4 669 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 KIFC1Q9BW19 673 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 BCL2L14Q9BZR8 327 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 STRADBQ9C0K7 418 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 C20orf27Q9GZN8 174 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 WWP1Q9H0M0 922 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 SLITRK2Q9H156 845 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 PIGUQ9H490 435 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 ANKRA2Q9H9E1 313 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 LYRM4Q9HD34 91 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 BPIFA1Q9NP55 256 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 DYRK4Q9NR20 520 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 ASAH2Q9NR71 780 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 FBXO6Q9NRD1 293 aaPredicted RBP3.31□□□□□ -1.88
SMG6-208ENST00000570874 IMP3Q9NV31 184 aaKnown RBP3.31□□□□□ -1.88
SMG6-208ENST00000570874 NLGN3Q9NZ94 848 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 TMEM216Q9P0N5 145 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 HSPB7Q9UBY9 170 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 GPR132Q9UNW8 380 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 RCE1Q9Y256 329 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 PIGLQ9Y2B2 252 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 POFUT2Q9Y2G5 429 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 VWA7Q9Y334 891 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 STARD10Q9Y365 291 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 OR10H1Q9Y4A9 318 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 TMEM184BQ9Y519 407 aaPredicted RBP3.31□□□□□ -1.88
SMG6-208ENST00000570874 KLF2Q9Y5W3 355 aaPredicted RBP3.31□□□□□ -1.88
SMG6-208ENST00000570874 IRAK3Q9Y616 596 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 WNT6Q9Y6F9 365 aa3.31□□□□□ -1.88
SMG6-208ENST00000570874 GOLGA4Q13439 2230 aaKnown RBP3.31□□□□□ -1.88
SMG6-208ENST00000570874 ARID1BQ8NFD5 2236 aaPredicted RBP3.3□□□□□ -1.88
SMG6-208ENST00000570874 TMEM265A0A087WTH1 108 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 LOC285095A0A1B0GVY8 99 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 FAM95CA0A1B0GW59 222 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 A0A1W2PR77 199 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 ILVBLA1L0T0 632 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 TMEM213A2RRL7 107 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 MROH6A6NGR9 719 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 OTOL1A6NHN0 477 aaPredicted RBP3.3□□□□□ -1.88
SMG6-208ENST00000570874 ZNF785A8K8V0 405 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 NPIPA7E9PJI5 369 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 NEDD8-MDP1E9PL57 170 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 RNASEK-C17orf49H0YIS7 233 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 FOXE1O00358 373 aaPredicted RBP3.3□□□□□ -1.88
SMG6-208ENST00000570874 FBP2O00757 339 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 COPEO14579 308 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 CCSO14618 274 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 CLOCKO15516 846 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 OGG1O15527 345 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 SIGLEC6O43699 453 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 EDF1O60869 148 aaKnown RBP3.3□□□□□ -1.88
SMG6-208ENST00000570874 FKBP6O75344 327 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 CLDN11O75508 207 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 LYPLA1O75608 230 aaPredicted RBP3.3□□□□□ -1.88
SMG6-208ENST00000570874 OR4F21O95013 312 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 NADKO95544 446 aaPredicted RBP3.3□□□□□ -1.88
SMG6-208ENST00000570874 KRT75O95678 551 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 GOT2P00505 430 aaKnown RBP3.3□□□□□ -1.88
SMG6-208ENST00000570874 TGFB1P01137 390 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 CD1AP06126 327 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 CRYGBP07316 175 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 TFPTP0C1Z6 253 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 SBK3P0C264 359 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 GIMD1P0DJR0 217 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 NPIPA8P0DM63 369 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 FGF3P11487 239 aaPredicted RBP3.3□□□□□ -1.88
SMG6-208ENST00000570874 FGF5P12034 268 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 ARSAP15289 507 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 ZNF26P17031 533 aaPredicted RBP3.3□□□□□ -1.88
SMG6-208ENST00000570874 AMD1P17707 334 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 IGFBP2P18065 325 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 ANXA7P20073 488 aaKnown RBP3.3□□□□□ -1.88
SMG6-208ENST00000570874 ITGALP20701 1170 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 GSTM3P21266 225 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 S1PR1P21453 382 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 CRABP1P29762 137 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 FMO4P31512 558 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 SLC6A6P31641 620 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 OTX1P32242 354 aaPredicted RBP3.3□□□□□ -1.88
SMG6-208ENST00000570874 BCL6P41182 706 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 MAGEA12P43365 314 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 GLRBP48167 497 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 CSRP3P50461 194 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 CCR8P51685 355 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 SUOXP51687 545 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 LIMK2P53671 638 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 CDH13P55290 713 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 TAS2R60P59551 318 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 DCDC1P59894 354 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 PSME3P61289 254 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 PPP2CBP62714 309 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 PPP2CAP67775 309 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 SHC2P98077 582 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 PITPNAQ00169 270 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 TIAL1Q01085 375 aaKnown RBP eCLIP3.3□□□□□ -1.88
SMG6-208ENST00000570874 FLI1Q01543 452 aaPredicted RBP3.3□□□□□ -1.88
SMG6-208ENST00000570874 ROM1Q03395 351 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 BNIP3Q12983 259 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 CDH18Q13634 790 aa3.3□□□□□ -1.88
SMG6-208ENST00000570874 HLXQ14774 488 aaPredicted RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms