RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 PDLIM1O00151 329 aa6.25□□□□□ -1.41
SMG6-205ENST00000570659 NDUFS8O00217 210 aa6.25□□□□□ -1.41
SMG6-205ENST00000570659 KLF11O14901 512 aa6.25□□□□□ -1.41
SMG6-205ENST00000570659 PLOD3O60568 738 aa6.25□□□□□ -1.41
SMG6-205ENST00000570659 KERAO60938 352 aa6.25□□□□□ -1.41
SMG6-205ENST00000570659 PRB2P02812 416 aaPredicted RBP6.25□□□□□ -1.41
SMG6-205ENST00000570659 JUNP05412 331 aaKnown RBP6.25□□□□□ -1.41
SMG6-205ENST00000570659 EPHA1P21709 976 aa6.25□□□□□ -1.41
SMG6-205ENST00000570659 CALCRP30988 508 aa6.25□□□□□ -1.41
SMG6-205ENST00000570659 APOBEC3AP31941 199 aaPredicted RBP6.25□□□□□ -1.41
SMG6-205ENST00000570659 MAP3K8P41279 467 aa6.25□□□□□ -1.41
SMG6-205ENST00000570659 HTR6P50406 440 aa6.25□□□□□ -1.41
SMG6-205ENST00000570659 UBA52P62987 128 aaKnown RBP6.25□□□□□ -1.41
SMG6-205ENST00000570659 PHC1P78364 1004 aa6.25□□□□□ -1.41
SMG6-205ENST00000570659 ZNF117Q03924 483 aa6.25□□□□□ -1.41
SMG6-205ENST00000570659 GTF2H2Q13888 395 aa6.25□□□□□ -1.41
SMG6-205ENST00000570659 MORF4L2Q15014 288 aa6.25□□□□□ -1.41
SMG6-205ENST00000570659 TUSC1Q2TAM9 212 aa6.25□□□□□ -1.41
SMG6-205ENST00000570659 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.25□□□□□ -1.41
SMG6-205ENST00000570659 CCNJQ5T5M9 372 aa6.25□□□□□ -1.41
SMG6-205ENST00000570659 C6orf163Q5TEZ5 329 aa6.25□□□□□ -1.41
SMG6-205ENST00000570659 LIPJQ5W064 366 aa6.25□□□□□ -1.41
SMG6-205ENST00000570659 FRG2Q64ET8 278 aa6.25□□□□□ -1.41
SMG6-205ENST00000570659 ZNF544Q6NX49 715 aa6.25□□□□□ -1.41
SMG6-205ENST00000570659 GTF2H2CQ6P1K8 395 aa6.25□□□□□ -1.41
SMG6-205ENST00000570659 LETMD1Q6P1Q0 360 aa6.25□□□□□ -1.41
SMG6-205ENST00000570659 OLIG3Q7RTU3 272 aa6.25□□□□□ -1.41
SMG6-205ENST00000570659 LRRC17Q8N6Y2 441 aa6.25□□□□□ -1.41
SMG6-205ENST00000570659 CLDND2Q8NHS1 167 aa6.25□□□□□ -1.41
SMG6-205ENST00000570659 FBXO27Q8NI29 283 aa6.25□□□□□ -1.41
SMG6-205ENST00000570659 RNF217Q8TC41 542 aa6.25□□□□□ -1.41
SMG6-205ENST00000570659 ZBTB8AQ96BR9 441 aa6.25□□□□□ -1.41
SMG6-205ENST00000570659 RADILQ96JH8 1075 aa6.25□□□□□ -1.41
SMG6-205ENST00000570659 FRG2BQ96QU4 278 aa6.25□□□□□ -1.41
SMG6-205ENST00000570659 SERPINI1Q99574 410 aa6.25□□□□□ -1.41
SMG6-205ENST00000570659 RBBP8Q99708 897 aa6.25□□□□□ -1.41
SMG6-205ENST00000570659 EBPLQ9BY08 206 aa6.25□□□□□ -1.41
SMG6-205ENST00000570659 QRSL1Q9H0R6 528 aaKnown RBP6.25□□□□□ -1.41
SMG6-205ENST00000570659 PTGES2Q9H7Z7 377 aa6.25□□□□□ -1.41
SMG6-205ENST00000570659 UNKLQ9H9P5 680 aaKnown RBP6.25□□□□□ -1.41
SMG6-205ENST00000570659 LZTFL1Q9NQ48 299 aa6.25□□□□□ -1.41
SMG6-205ENST00000570659 HIF1ANQ9NWT6 349 aa6.25□□□□□ -1.41
SMG6-205ENST00000570659 TREM2Q9NZC2 230 aa6.25□□□□□ -1.41
SMG6-205ENST00000570659 DMGDHQ9UI17 866 aaKnown RBP6.25□□□□□ -1.41
SMG6-205ENST00000570659 SLC12A4Q9UP95 1085 aa6.25□□□□□ -1.41
SMG6-205ENST00000570659 BIRC6Q9NR09 4857 aa6.24□□□□□ -1.41
SMG6-205ENST00000570659 A0A0A6YYJ9 748 aa6.24□□□□□ -1.41
SMG6-205ENST00000570659 IGHV1-18A0A0C4DH31 117 aa6.24□□□□□ -1.41
SMG6-205ENST00000570659 CENPVL1A0A0U1RR11 272 aa6.24□□□□□ -1.41
SMG6-205ENST00000570659 GOLGA6L10A6NI86 522 aa6.24□□□□□ -1.41
SMG6-205ENST00000570659 ZNF716A6NP11 495 aa6.24□□□□□ -1.41
SMG6-205ENST00000570659 ALG1L2C9J202 215 aa6.24□□□□□ -1.41
SMG6-205ENST00000570659 SLCO1B7G3V0H7 640 aa6.24□□□□□ -1.41
SMG6-205ENST00000570659 ZNF195O14628 629 aa6.24□□□□□ -1.41
SMG6-205ENST00000570659 NDUFB5O43674 189 aa6.24□□□□□ -1.41
SMG6-205ENST00000570659 DLX3O60479 287 aa6.24□□□□□ -1.41
SMG6-205ENST00000570659 BCAS1O75363 584 aaPredicted RBP6.24□□□□□ -1.41
SMG6-205ENST00000570659 PRKD3O94806 890 aa6.24□□□□□ -1.41
SMG6-205ENST00000570659 IPO7O95373 1038 aaKnown RBP6.24□□□□□ -1.41
SMG6-205ENST00000570659 CELA3BP08861 270 aa6.24□□□□□ -1.41
SMG6-205ENST00000570659 NUDT17P0C025 328 aa6.24□□□□□ -1.41
SMG6-205ENST00000570659 HKR1P10072 659 aa6.24□□□□□ -1.41
SMG6-205ENST00000570659 ACP2P11117 423 aa6.24□□□□□ -1.41
SMG6-205ENST00000570659 DAOP14920 347 aa6.24□□□□□ -1.41
SMG6-205ENST00000570659 PTAFRP25105 342 aa6.24□□□□□ -1.41
SMG6-205ENST00000570659 GABRA3P34903 492 aa6.24□□□□□ -1.41
SMG6-205ENST00000570659 KRT20P35900 424 aa6.24□□□□□ -1.41
SMG6-205ENST00000570659 RAB10P61026 200 aa6.24□□□□□ -1.41
SMG6-205ENST00000570659 ATP6V0D1P61421 351 aa6.24□□□□□ -1.41
SMG6-205ENST00000570659 TUBA1BP68363 451 aa6.24□□□□□ -1.41
SMG6-205ENST00000570659 TUBA4AP68366 448 aa6.24□□□□□ -1.41
SMG6-205ENST00000570659 MRPS22P82650 360 aaKnown RBP6.24□□□□□ -1.41
SMG6-205ENST00000570659 HGFACQ04756 655 aa6.24□□□□□ -1.41
SMG6-205ENST00000570659 FRG1Q14331 258 aaKnown RBP6.24□□□□□ -1.41
SMG6-205ENST00000570659 MLC1Q15049 377 aa6.24□□□□□ -1.41
SMG6-205ENST00000570659 CYP27C1Q4G0S4 372 aa6.24□□□□□ -1.41
SMG6-205ENST00000570659 VHLLQ6RSH7 139 aa6.24□□□□□ -1.41
SMG6-205ENST00000570659 SHISA2Q6UWI4 295 aa6.24□□□□□ -1.41
SMG6-205ENST00000570659 TMEM108Q6UXF1 575 aa6.24□□□□□ -1.41
SMG6-205ENST00000570659 TUBA1AQ71U36 451 aa6.24□□□□□ -1.41
SMG6-205ENST00000570659 RHOUQ7L0Q8 258 aa6.24□□□□□ -1.41
SMG6-205ENST00000570659 SPATA19Q7Z5L4 167 aa6.24□□□□□ -1.41
SMG6-205ENST00000570659 TRABD2AQ86V40 505 aa6.24□□□□□ -1.41
SMG6-205ENST00000570659 CDK20Q8IZL9 346 aa6.24□□□□□ -1.41
SMG6-205ENST00000570659 BCL6BQ8N143 479 aaPredicted RBP6.24□□□□□ -1.41
SMG6-205ENST00000570659 C7orf57Q8NEG2 295 aa6.24□□□□□ -1.41
SMG6-205ENST00000570659 OR4F6Q8NGB9 312 aa6.24□□□□□ -1.41
SMG6-205ENST00000570659 YIPF5Q969M3 257 aa6.24□□□□□ -1.41
SMG6-205ENST00000570659 MRPL24Q96A35 216 aaKnown RBP6.24□□□□□ -1.41
SMG6-205ENST00000570659 C16orf58Q96GQ5 468 aa6.24□□□□□ -1.41
SMG6-205ENST00000570659 APIPQ96GX9 242 aa6.24□□□□□ -1.41
SMG6-205ENST00000570659 ZNF48Q96MX3 618 aaPredicted RBP6.24□□□□□ -1.41
SMG6-205ENST00000570659 MUS81Q96NY9 551 aa6.24□□□□□ -1.41
SMG6-205ENST00000570659 LMF2Q9BU23 707 aaKnown RBP6.24□□□□□ -1.41
SMG6-205ENST00000570659 TRMOQ9BU70 441 aa6.24□□□□□ -1.41
SMG6-205ENST00000570659 TMPRSS13Q9BYE2 586 aa6.24□□□□□ -1.41
SMG6-205ENST00000570659 RACGAP1Q9H0H5 632 aa6.24□□□□□ -1.41
SMG6-205ENST00000570659 TSPY26PQ9H489 355 aa6.24□□□□□ -1.41
SMG6-205ENST00000570659 GLIPR2Q9H4G4 154 aa6.24□□□□□ -1.41
SMG6-205ENST00000570659 PFDN4Q9NQP4 134 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms