RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 DUTP33316 252 aaKnown RBP2.88□□□□□ -1.95
CNOT1-221ENST00000569924 SFTPDP35247 375 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 USP8P40818 1118 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 SLC6A8P48029 635 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 NR2C2P49116 596 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 DNA2P51530 1060 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 CCL11P51671 97 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 MAZP56270 477 aaKnown RBP2.88□□□□□ -1.95
CNOT1-221ENST00000569924 SNRPD1P62314 119 aaKnown RBP2.88□□□□□ -1.95
CNOT1-221ENST00000569924 CCL7P80098 99 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 RAD51Q06609 339 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 DMPKQ09013 629 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 C1orf61Q13536 156 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 RFTN1Q14699 578 aaPredicted RBP2.88□□□□□ -1.95
CNOT1-221ENST00000569924 NFATC4Q14934 902 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 IRF4Q15306 451 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 TGIF1Q15583 401 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 CLPPQ16740 277 aaPredicted RBP2.88□□□□□ -1.95
CNOT1-221ENST00000569924 ODF4Q2M2E3 257 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 PTPN20Q4JDL3 420 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 TMEM52BQ4KMG9 183 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 AGKQ53H12 422 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 MANEAQ5SRI9 462 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 HIST2H2AA3Q6FI13 130 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 FAM122CQ6P4D5 195 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 CLEC18BQ6UXF7 455 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 GDPD4Q6W3E5 623 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 YRDCQ86U90 279 aaKnown RBP2.88□□□□□ -1.95
CNOT1-221ENST00000569924 VPS36Q86VN1 386 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 GKN2Q86XP6 184 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 FAM71AQ8IYT1 594 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 RNF113BQ8IZP6 322 aaKnown RBP2.88□□□□□ -1.95
CNOT1-221ENST00000569924 GCNT2Q8N0V5 402 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 GBP7Q8N8V2 638 aaPredicted RBP2.88□□□□□ -1.95
CNOT1-221ENST00000569924 SMYD1Q8NB12 490 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 NEXN-AS1Q8NBZ9 246 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 CLEC18CQ8NCF0 446 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 TMEM35BQ8NCS4 154 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 C7orf57Q8NEG2 295 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 TRPV3Q8NET8 790 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 OR11H4Q8NGC9 324 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 OR2AP1Q8NGE2 309 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 ZNF564Q8TBZ8 553 aaPredicted RBP2.88□□□□□ -1.95
CNOT1-221ENST00000569924 HCAR2Q8TDS4 363 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 CXorf40AQ8TE69 158 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 TMEM255BQ8WV15 326 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 ZNF75CPQ92670 426 aaPredicted RBP2.88□□□□□ -1.95
CNOT1-221ENST00000569924 GLYATL1Q969I3 302 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 ABTB1Q969K4 478 aaPredicted RBP2.88□□□□□ -1.95
CNOT1-221ENST00000569924 VOPP1Q96AW1 172 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 RAB39BQ96DA2 213 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 TPD52L3Q96J77 140 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 MAP3K3Q99759 626 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 FUCA2Q9BTY2 467 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 C1QTNF3Q9BXJ4 246 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 CAPS2Q9BXY5 557 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 GANQ9H2C0 597 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 LRRN3Q9H3W5 708 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 C5orf66Q9H5L9 145 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 SYNDIG1Q9H7V2 258 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 KRCC1Q9NPI7 259 aaPredicted RBP2.88□□□□□ -1.95
CNOT1-221ENST00000569924 DDX28Q9NUL7 540 aaKnown RBP2.88□□□□□ -1.95
CNOT1-221ENST00000569924 PTTG2Q9NZH5 202 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 AIPL1Q9NZN9 384 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 C6orf203Q9P0P8 240 aaPredicted RBP2.88□□□□□ -1.95
CNOT1-221ENST00000569924 KLHL8Q9P2G9 620 aaPredicted RBP2.88□□□□□ -1.95
CNOT1-221ENST00000569924 PISDQ9UG56 409 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 MAN1B1Q9UKM7 699 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 AMDHD2Q9Y303 409 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 SNX10Q9Y5X0 201 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 POLQO75417 2590 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 DNHD1Q96M86 4753 aa2.88□□□□□ -1.95
CNOT1-221ENST00000569924 LRRK1Q38SD2 2015 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 TMEM272A0A1B0GTI8 110 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 TSPAN11A1L157 253 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 C5orf60A6NFR6 353 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 E9PBE3 544 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 LGALS8O00214 317 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 ZW10O43264 779 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 KDELR3O43731 214 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 RAMP2O60895 175 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 WDR1O75083 606 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 PROP1O75360 226 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 TM7SF2O76062 418 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 NDUFB8O95169 186 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 IGSF6O95976 241 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 TNFP01375 233 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 APOHP02749 345 aaPredicted RBP2.87□□□□□ -1.95
CNOT1-221ENST00000569924 LIPFP07098 398 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 HOXC4P09017 264 aaPredicted RBP2.87□□□□□ -1.95
CNOT1-221ENST00000569924 GSTA2P09210 222 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 FAM106CPP0CH98 169 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 GP1BBP13224 206 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 CTSEP14091 401 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 ANPEPP15144 967 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 MYOD1P15172 320 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 ACVRL1P37023 503 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 MMP12P39900 470 aa2.87□□□□□ -1.95
CNOT1-221ENST00000569924 SLC1A3P43003 542 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms