RNA–Protein interactions for RNA: ENST00000569801.5

SNX29-208, Transcript of sorting nexin 29, humanhuman

TSL 4

Gene SNX29, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-208ENST00000569801 PIP5K1BO14986 540 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 GMFGO60234 142 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 NPHS1O60500 1241 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 SPAG7O75391 227 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 KCNH1O95259 989 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 OXSR1O95747 527 aaPredicted RBP7.4□□□□□ -1.22
SNX29-208ENST00000569801 CHEK2O96017 543 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 FGF4P08620 206 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 BCKDHAP12694 445 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 ZFP36P26651 326 aaKnown RBP7.4□□□□□ -1.22
SNX29-208ENST00000569801 ARRB2P32121 409 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 CPOXP36551 454 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 KIR2DL2P43627 348 aaPredicted RBP7.4□□□□□ -1.22
SNX29-208ENST00000569801 PRKAG1P54619 331 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 PSMD4P55036 377 aaKnown RBP7.4□□□□□ -1.22
SNX29-208ENST00000569801 EEF1A1P68104 462 aaKnown RBP7.4□□□□□ -1.22
SNX29-208ENST00000569801 DUSP5Q16690 384 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 TMEM44Q2T9K0 475 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 ELOA3BQ3SY89 546 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 GLYR1Q49A26 553 aaPredicted RBP7.4□□□□□ -1.22
SNX29-208ENST00000569801 XKR7Q5GH72 579 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 ARL13AQ5H913 290 aaPredicted RBP7.4□□□□□ -1.22
SNX29-208ENST00000569801 EXOSC6Q5RKV6 272 aaKnown RBP7.4□□□□□ -1.22
SNX29-208ENST00000569801 EEF1A1P5Q5VTE0 462 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 OR2A2Q6IF42 318 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 MFSD12Q6NUT3 480 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 VWA1Q6PCB0 445 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 ZNF474Q6S9Z5 364 aaPredicted RBP7.4□□□□□ -1.22
SNX29-208ENST00000569801 ZCCHC23Q6ZST2 131 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 SZRD1Q7Z422 152 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 P4HA3Q7Z4N8 544 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 GALNT10Q86SR1 603 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 DDIASQ8IXT1 998 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 CNEP1R1Q8N9A8 125 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 CDRT4Q8N9R6 151 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 SLC16A11Q8NCK7 471 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 ELOA3Q8NG57 546 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 CEP70Q8NHQ1 597 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 FNDC9Q8TBE3 224 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 FAM110BQ8TC76 370 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 AGR3Q8TD06 166 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 TCP10LQ8TDR4 215 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 SMPDL3BQ92485 455 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 SLC9A6Q92581 669 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 STARD4Q96DR4 205 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 OTUB1Q96FW1 271 aaPredicted RBP7.4□□□□□ -1.22
SNX29-208ENST00000569801 C16orf58Q96GQ5 468 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 MS4A4EQ96PG1 132 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 PIGQQ9BRB3 760 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 PINK1Q9BXM7 581 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 TBL1XR1Q9BZK7 514 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 IQCGQ9H095 443 aaKnown RBP7.4□□□□□ -1.22
SNX29-208ENST00000569801 PTGES2Q9H7Z7 377 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 SIRT3Q9NTG7 399 aaPredicted RBP7.4□□□□□ -1.22
SNX29-208ENST00000569801 ACSS1Q9NUB1 689 aaPredicted RBP7.4□□□□□ -1.22
SNX29-208ENST00000569801 FBXO34Q9NWN3 711 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 MED29Q9NX70 200 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 LGALS13Q9UHV8 139 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 TMED5Q9Y3A6 229 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 TESMINQ9Y4I5 508 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 TRAF6Q9Y4K3 522 aa7.4□□□□□ -1.22
SNX29-208ENST00000569801 CMYA5Q8N3K9 4069 aa7.4□□□□□ -1.23
SNX29-208ENST00000569801 NUP214P35658 2090 aaPredicted RBP7.39□□□□□ -1.23
SNX29-208ENST00000569801 SH3D21A4FU49 640 aa7.39□□□□□ -1.23
SNX29-208ENST00000569801 ALG1L2C9J202 215 aa7.39□□□□□ -1.23
SNX29-208ENST00000569801 SCAMP2O15127 329 aaKnown RBP7.39□□□□□ -1.23
SNX29-208ENST00000569801 EMC8O43402 210 aa7.39□□□□□ -1.23
SNX29-208ENST00000569801 TNFRSF21O75509 655 aa7.39□□□□□ -1.23
SNX29-208ENST00000569801 SMNDC1O75940 238 aaKnown RBP eCLIP7.39□□□□□ -1.23
SNX29-208ENST00000569801 KCNK2O95069 426 aa7.39□□□□□ -1.23
SNX29-208ENST00000569801 GOSR1O95249 250 aa7.39□□□□□ -1.23
SNX29-208ENST00000569801 CGAP01215 116 aa7.39□□□□□ -1.23
SNX29-208ENST00000569801 CRHP06850 196 aa7.39□□□□□ -1.23
SNX29-208ENST00000569801 NGFRP08138 427 aa7.39□□□□□ -1.23
SNX29-208ENST00000569801 LAMP1P11279 417 aa7.39□□□□□ -1.23
SNX29-208ENST00000569801 CCKARP32238 428 aa7.39□□□□□ -1.23
SNX29-208ENST00000569801 ASMTP46597 345 aa7.39□□□□□ -1.23
SNX29-208ENST00000569801 CLK3P49761 638 aaKnown RBP7.39□□□□□ -1.23
SNX29-208ENST00000569801 DIO3P55073 304 aa7.39□□□□□ -1.23
SNX29-208ENST00000569801 MANFP55145 182 aaKnown RBP7.39□□□□□ -1.23
SNX29-208ENST00000569801 CASP9P55211 416 aa7.39□□□□□ -1.23
SNX29-208ENST00000569801 EEFSECP57772 596 aaKnown RBP7.39□□□□□ -1.23
SNX29-208ENST00000569801 SIRPAP78324 504 aa7.39□□□□□ -1.23
SNX29-208ENST00000569801 FAM27E3Q08E93 113 aa7.39□□□□□ -1.23
SNX29-208ENST00000569801 C17orf67Q0P5P2 114 aa7.39□□□□□ -1.23
SNX29-208ENST00000569801 PTGR1Q14914 329 aa7.39□□□□□ -1.23
SNX29-208ENST00000569801 MLC1Q15049 377 aa7.39□□□□□ -1.23
SNX29-208ENST00000569801 PON3Q15166 354 aa7.39□□□□□ -1.23
SNX29-208ENST00000569801 GUSBP1Q15486 140 aa7.39□□□□□ -1.23
SNX29-208ENST00000569801 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.39□□□□□ -1.23
SNX29-208ENST00000569801 VPS26BQ4G0F5 336 aa7.39□□□□□ -1.23
SNX29-208ENST00000569801 CCNJQ5T5M9 372 aa7.39□□□□□ -1.23
SNX29-208ENST00000569801 FIGNL1Q6PIW4 674 aa7.39□□□□□ -1.23
SNX29-208ENST00000569801 CHMP1BQ7LBR1 199 aa7.39□□□□□ -1.23
SNX29-208ENST00000569801 BTLAQ7Z6A9 289 aa7.39□□□□□ -1.23
SNX29-208ENST00000569801 GGNQ86UU5 652 aa7.39□□□□□ -1.23
SNX29-208ENST00000569801 METTL25Q8N6Q8 603 aa7.39□□□□□ -1.23
SNX29-208ENST00000569801 GATSQ8NAP1 163 aa7.39□□□□□ -1.23
SNX29-208ENST00000569801 OR7A2PQ8NGA2 310 aa7.39□□□□□ -1.23
SNX29-208ENST00000569801 OR4C3Q8NH37 302 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms