RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 MED17Q9NVC6 651 aa11.61□□□□□ -0.55
CDT1-203ENST00000569140 COQ3Q9NZJ6 369 aa11.61□□□□□ -0.55
CDT1-203ENST00000569140 KCNE5Q9UJ90 142 aa11.61□□□□□ -0.55
CDT1-203ENST00000569140 L3MBTL1Q9Y468 752 aa11.61□□□□□ -0.55
CDT1-203ENST00000569140 A0A087WZY1 265 aa11.6□□□□□ -0.55
CDT1-203ENST00000569140 IL7RP16871 459 aa11.6□□□□□ -0.55
CDT1-203ENST00000569140 DRD4P21917 467 aa11.6□□□□□ -0.55
CDT1-203ENST00000569140 CHMP24386 653 aa11.6□□□□□ -0.55
CDT1-203ENST00000569140 RYKP34925 604 aa11.6□□□□□ -0.55
CDT1-203ENST00000569140 MAGEA8P43361 318 aa11.6□□□□□ -0.55
CDT1-203ENST00000569140 GFRA1P56159 465 aa11.6□□□□□ -0.55
CDT1-203ENST00000569140 NUP107P57740 925 aa11.6□□□□□ -0.55
CDT1-203ENST00000569140 MTPNP58546 118 aa11.6□□□□□ -0.55
CDT1-203ENST00000569140 ADORA2A-AS1P86434 159 aa11.6□□□□□ -0.55
CDT1-203ENST00000569140 FOXF1Q12946 379 aa11.6□□□□□ -0.55
CDT1-203ENST00000569140 CYLC2Q14093 348 aaPredicted RBP11.6□□□□□ -0.55
CDT1-203ENST00000569140 FGFBP1Q14512 234 aa11.6□□□□□ -0.55
CDT1-203ENST00000569140 SF3B4Q15427 424 aaKnown RBP eCLIP11.6□□□□□ -0.552e-6■□□□□ 11.3
CDT1-203ENST00000569140 MAPK14Q16539 360 aa11.6□□□□□ -0.55
CDT1-203ENST00000569140 CYP51A1Q16850 503 aa11.6□□□□□ -0.55
CDT1-203ENST00000569140 PLPPR5Q32ZL2 321 aa11.6□□□□□ -0.55
CDT1-203ENST00000569140 NHSL2Q5HYW2 709 aa11.6□□□□□ -0.55
CDT1-203ENST00000569140 RPTNQ6XPR3 784 aa11.6□□□□□ -0.55
CDT1-203ENST00000569140 MEIOBQ8N635 442 aa11.6□□□□□ -0.55
CDT1-203ENST00000569140 POU5F2Q8N7G0 328 aa11.6□□□□□ -0.55
CDT1-203ENST00000569140 NFKBIDQ8NI38 313 aa11.6□□□□□ -0.55
CDT1-203ENST00000569140 TSPEARQ8WU66 669 aa11.6□□□□□ -0.55
CDT1-203ENST00000569140 SLC38A5Q8WUX1 472 aa11.6□□□□□ -0.55
CDT1-203ENST00000569140 RND1Q92730 232 aa11.6□□□□□ -0.55
CDT1-203ENST00000569140 MAL2Q969L2 176 aa11.6□□□□□ -0.55
CDT1-203ENST00000569140 SDCCAG3Q96C92 435 aa11.6□□□□□ -0.55
CDT1-203ENST00000569140 WDYHV1Q96HA8 205 aa11.6□□□□□ -0.55
CDT1-203ENST00000569140 RNF145Q96MT1 663 aa11.6□□□□□ -0.55
CDT1-203ENST00000569140 CPPED1Q9BRF8 314 aaPredicted RBP11.6□□□□□ -0.55
CDT1-203ENST00000569140 SLC38A1Q9H2H9 487 aa11.6□□□□□ -0.55
CDT1-203ENST00000569140 TMEM185BQ9H7F4 350 aa11.6□□□□□ -0.55
CDT1-203ENST00000569140 SLC35A3Q9Y2D2 325 aa11.6□□□□□ -0.55
CDT1-203ENST00000569140 MRPS18CQ9Y3D5 142 aaKnown RBP11.6□□□□□ -0.55
CDT1-203ENST00000569140 PRRC2CQ9Y520 2896 aaKnown RBP11.6□□□□□ -0.55
CDT1-203ENST00000569140 GCN1Q92616 2671 aaKnown RBP11.59□□□□□ -0.55
CDT1-203ENST00000569140 NBASA2RRP1 2371 aa11.59□□□□□ -0.55
CDT1-203ENST00000569140 OR2M5A3KFT3 312 aa11.59□□□□□ -0.55
CDT1-203ENST00000569140 CLDN24A6NM45 220 aa11.59□□□□□ -0.55
CDT1-203ENST00000569140 BBIP1A8MTZ0 92 aa11.59□□□□□ -0.55
CDT1-203ENST00000569140 AHRRA9YTQ3 701 aa11.59□□□□□ -0.55
CDT1-203ENST00000569140 FBP2O00757 339 aa11.59□□□□□ -0.55
CDT1-203ENST00000569140 EIF4E2O60573 245 aaKnown RBP11.59□□□□□ -0.55
CDT1-203ENST00000569140 OPN1LWP04000 364 aa11.59□□□□□ -0.55
CDT1-203ENST00000569140 DBIP07108 87 aaKnown RBP11.59□□□□□ -0.55
CDT1-203ENST00000569140 PEPDP12955 493 aa11.59□□□□□ -0.55
CDT1-203ENST00000569140 HOXB9P17482 250 aaPredicted RBP11.59□□□□□ -0.55
CDT1-203ENST00000569140 ME2P23368 584 aa11.59□□□□□ -0.55
CDT1-203ENST00000569140 PTGER4P35408 488 aa11.59□□□□□ -0.55
CDT1-203ENST00000569140 SUMO3P55854 103 aaPredicted RBP11.59□□□□□ -0.55
CDT1-203ENST00000569140 KCNJ10P78508 379 aa11.59□□□□□ -0.55
CDT1-203ENST00000569140 ACSF3Q4G176 576 aaPredicted RBP11.59□□□□□ -0.55
CDT1-203ENST00000569140 LIN52Q52LA3 116 aa11.59□□□□□ -0.55
CDT1-203ENST00000569140 POMZP3Q6PJE2 187 aa11.59□□□□□ -0.55
CDT1-203ENST00000569140 DLEU7Q6UYE1 221 aa11.59□□□□□ -0.55
CDT1-203ENST00000569140 P4HA3Q7Z4N8 544 aa11.59□□□□□ -0.55
CDT1-203ENST00000569140 MTDHQ86UE4 582 aaKnown RBP11.59□□□□□ -0.55
CDT1-203ENST00000569140 MARVELD2Q8N4S9 558 aa11.59□□□□□ -0.55
CDT1-203ENST00000569140 ZNF808Q8N4W9 903 aaPredicted RBP11.59□□□□□ -0.55
CDT1-203ENST00000569140 DPP10Q8N608 796 aa11.59□□□□□ -0.55
CDT1-203ENST00000569140 ATP6V1C2Q8NEY4 427 aa11.59□□□□□ -0.55
CDT1-203ENST00000569140 OR52P1PQ8NH57 321 aa11.59□□□□□ -0.55
CDT1-203ENST00000569140 OR5W2Q8NH69 310 aa11.59□□□□□ -0.55
CDT1-203ENST00000569140 ZNF563Q8TA94 476 aa11.59□□□□□ -0.55
CDT1-203ENST00000569140 PHF10Q8WUB8 498 aaKnown RBP11.59□□□□□ -0.55
CDT1-203ENST00000569140 ZBTB8AQ96BR9 441 aa11.59□□□□□ -0.55
CDT1-203ENST00000569140 ZG16BQ96DA0 208 aa11.59□□□□□ -0.55
CDT1-203ENST00000569140 DMRTA2Q96SC8 542 aa11.59□□□□□ -0.55
CDT1-203ENST00000569140 CGREF1Q99674 301 aa11.59□□□□□ -0.55
CDT1-203ENST00000569140 TREX2Q9BQ50 279 aaPredicted RBP11.59□□□□□ -0.55
CDT1-203ENST00000569140 KLHDC3Q9BQ90 382 aa11.59□□□□□ -0.55
CDT1-203ENST00000569140 TTYH2Q9BSA4 534 aa11.59□□□□□ -0.55
CDT1-203ENST00000569140 PRDM14Q9GZV8 571 aa11.59□□□□□ -0.55
CDT1-203ENST00000569140 SAP130Q9H0E3 1048 aa11.59□□□□□ -0.55
CDT1-203ENST00000569140 IKZF5Q9H5V7 419 aa11.59□□□□□ -0.55
CDT1-203ENST00000569140 MTHFD2LQ9H903 347 aaPredicted RBP11.59□□□□□ -0.55
CDT1-203ENST00000569140 A4GALTQ9NPC4 353 aa11.59□□□□□ -0.55
CDT1-203ENST00000569140 STOML1Q9UBI4 398 aa11.59□□□□□ -0.55
CDT1-203ENST00000569140 ICAM5Q9UMF0 924 aa11.59□□□□□ -0.55
CDT1-203ENST00000569140 ZNF337Q9Y3M9 751 aa11.59□□□□□ -0.55
CDT1-203ENST00000569140 FAM215AQ9Y5M1 114 aa11.59□□□□□ -0.55
CDT1-203ENST00000569140 UBR5O95071 2799 aaPredicted RBP11.59□□□□□ -0.55
CDT1-203ENST00000569140 TENM4Q6N022 2769 aa11.59□□□□□ -0.55
CDT1-203ENST00000569140 ZNF407Q9C0G0 2248 aa11.58□□□□□ -0.56
CDT1-203ENST00000569140 TRBV5-3A0A0A0MS03 114 aa11.58□□□□□ -0.56
CDT1-203ENST00000569140 AGAP5A6NIR3 686 aa11.58□□□□□ -0.56
CDT1-203ENST00000569140 FAM90A27PA6NNH2 459 aa11.58□□□□□ -0.56
CDT1-203ENST00000569140 EIF1AYO14602 144 aaKnown RBP11.58□□□□□ -0.56
CDT1-203ENST00000569140 GUSBP08236 651 aa11.58□□□□□ -0.56
CDT1-203ENST00000569140 HOXD4P09016 255 aaPredicted RBP11.58□□□□□ -0.56
CDT1-203ENST00000569140 FREM3P0C091 2139 aa11.58□□□□□ -0.56
CDT1-203ENST00000569140 TFPTP0C1Z6 253 aa11.58□□□□□ -0.56
CDT1-203ENST00000569140 GLI4P10075 376 aa11.58□□□□□ -0.56
CDT1-203ENST00000569140 ZNF708P17019 499 aa11.58□□□□□ -0.56
CDT1-203ENST00000569140 ZNF17P17021 662 aa11.58□□□□□ -0.56
CDT1-203ENST00000569140 AQP1P29972 269 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms