RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 SMPDL3BQ92485 455 aa18.26■□□□□ 0.51
CLK3-225ENST00000569063 FIG4Q92562 907 aa18.26■□□□□ 0.51
CLK3-225ENST00000569063 CCDC115Q96NT0 180 aa18.26■□□□□ 0.51
CLK3-225ENST00000569063 NMUR2Q9GZQ4 415 aa18.26■□□□□ 0.51
CLK3-225ENST00000569063 OR51I1Q9H343 314 aa18.26■□□□□ 0.51
CLK3-225ENST00000569063 RNF122Q9H9V4 155 aa18.26■□□□□ 0.51
CLK3-225ENST00000569063 PACSIN3Q9UKS6 424 aa18.26■□□□□ 0.51
CLK3-225ENST00000569063 ICAM5Q9UMF0 924 aa18.26■□□□□ 0.51
CLK3-225ENST00000569063 CREBBPQ92793 2442 aa18.25■□□□□ 0.51
CLK3-225ENST00000569063 FAM221AA4D161 298 aa18.25■□□□□ 0.51
CLK3-225ENST00000569063 A8MXE2 369 aa18.25■□□□□ 0.51
CLK3-225ENST00000569063 STX11O75558 287 aa18.25■□□□□ 0.51
CLK3-225ENST00000569063 CTAG2O75638 210 aa18.25■□□□□ 0.51
CLK3-225ENST00000569063 AGR2O95994 175 aa18.25■□□□□ 0.51
CLK3-225ENST00000569063 GUSBP08236 651 aa18.25■□□□□ 0.51
CLK3-225ENST00000569063 IL12AP29459 219 aa18.25■□□□□ 0.51
CLK3-225ENST00000569063 EIF1P41567 113 aaKnown RBP18.25■□□□□ 0.51
CLK3-225ENST00000569063 P2RX1P51575 399 aa18.25■□□□□ 0.51
CLK3-225ENST00000569063 NME5P56597 212 aa18.25■□□□□ 0.51
CLK3-225ENST00000569063 PON3Q15166 354 aa18.25■□□□□ 0.51
CLK3-225ENST00000569063 AP1ARQ63HQ0 302 aa18.25■□□□□ 0.51
CLK3-225ENST00000569063 SAXO2Q658L1 398 aa18.25■□□□□ 0.51
CLK3-225ENST00000569063 HEPHL1Q6MZM0 1159 aa18.25■□□□□ 0.51
CLK3-225ENST00000569063 CBLN3Q6UW01 205 aa18.25■□□□□ 0.51
CLK3-225ENST00000569063 TMEM200AQ86VY9 491 aa18.25■□□□□ 0.51
CLK3-225ENST00000569063 FNDC9Q8TBE3 224 aa18.25■□□□□ 0.51
CLK3-225ENST00000569063 POC1BQ8TC44 478 aa18.25■□□□□ 0.51
CLK3-225ENST00000569063 PIWIL2Q8TC59 973 aaKnown RBP18.25■□□□□ 0.51
CLK3-225ENST00000569063 ZNF75CPQ92670 426 aaPredicted RBP18.25■□□□□ 0.51
CLK3-225ENST00000569063 ARL8AQ96BM9 186 aa18.25■□□□□ 0.51
CLK3-225ENST00000569063 STARD4Q96DR4 205 aa18.25■□□□□ 0.51
CLK3-225ENST00000569063 NEURL3Q96EH8 262 aa18.25■□□□□ 0.51
CLK3-225ENST00000569063 ZNF845Q96IR2 970 aaPredicted RBP18.25■□□□□ 0.51
CLK3-225ENST00000569063 ADGRG7Q96K78 797 aa18.25■□□□□ 0.51
CLK3-225ENST00000569063 RNF145Q96MT1 663 aa18.25■□□□□ 0.51
CLK3-225ENST00000569063 RBM24Q9BX46 236 aaKnown RBP18.25■□□□□ 0.51
CLK3-225ENST00000569063 EXD2Q9NVH0 621 aa18.25■□□□□ 0.51
CLK3-225ENST00000569063 CARD8Q9Y2G2 431 aa18.25■□□□□ 0.51
CLK3-225ENST00000569063 TUBAL3A6NHL2 446 aa18.24■□□□□ 0.51
CLK3-225ENST00000569063 GTPBP1O00178 669 aaKnown RBP18.24■□□□□ 0.51
CLK3-225ENST00000569063 ADAMDEC1O15204 470 aa18.24■□□□□ 0.51
CLK3-225ENST00000569063 OIP5O43482 229 aa18.24■□□□□ 0.51
CLK3-225ENST00000569063 FCMRO60667 390 aa18.24■□□□□ 0.51
CLK3-225ENST00000569063 PGRP06401 933 aa18.24■□□□□ 0.51
CLK3-225ENST00000569063 KIR2DL2P43627 348 aaPredicted RBP18.24■□□□□ 0.51
CLK3-225ENST00000569063 LRRC74AQ0VAA2 488 aa18.24■□□□□ 0.51
CLK3-225ENST00000569063 ZNF141Q15928 474 aa18.24■□□□□ 0.51
CLK3-225ENST00000569063 SGCBQ16585 318 aa18.24■□□□□ 0.51
CLK3-225ENST00000569063 CTU2Q2VPK5 515 aaKnown RBP18.24■□□□□ 0.51
CLK3-225ENST00000569063 LUZP2Q86TE4 346 aa18.24■□□□□ 0.51
CLK3-225ENST00000569063 CDH24Q86UP0 819 aa18.24■□□□□ 0.51
CLK3-225ENST00000569063 GLB1L3Q8NCI6 653 aaPredicted RBP18.24■□□□□ 0.51
CLK3-225ENST00000569063 SLC35A5Q9BS91 424 aa18.24■□□□□ 0.51
CLK3-225ENST00000569063 ZNF350Q9GZX5 532 aa18.24■□□□□ 0.51
CLK3-225ENST00000569063 PAQR5Q9NXK6 330 aaPredicted RBP18.24■□□□□ 0.51
CLK3-225ENST00000569063 GALNT8Q9NY28 637 aa18.24■□□□□ 0.51
CLK3-225ENST00000569063 MED12LQ86YW9 2145 aa18.23■□□□□ 0.51
CLK3-225ENST00000569063 EIF1AYO14602 144 aaKnown RBP18.23■□□□□ 0.51
CLK3-225ENST00000569063 ZNF195O14628 629 aa18.23■□□□□ 0.51
CLK3-225ENST00000569063 MSTNO14793 375 aa18.23■□□□□ 0.51
CLK3-225ENST00000569063 EIF4E2O60573 245 aaKnown RBP18.23■□□□□ 0.51
CLK3-225ENST00000569063 EPXP11678 715 aa18.23■□□□□ 0.51
CLK3-225ENST00000569063 FCGR2AP12318 317 aa18.23■□□□□ 0.51
CLK3-225ENST00000569063 IDO1P14902 403 aa18.23■□□□□ 0.51
CLK3-225ENST00000569063 ADH6P28332 368 aa18.23■□□□□ 0.51
CLK3-225ENST00000569063 EIF1AXP47813 144 aaKnown RBP18.23■□□□□ 0.51
CLK3-225ENST00000569063 CPA2P48052 419 aa18.23■□□□□ 0.51
CLK3-225ENST00000569063 PCYT1AP49585 367 aa18.23■□□□□ 0.51
CLK3-225ENST00000569063 CASP9P55211 416 aa18.23■□□□□ 0.51
CLK3-225ENST00000569063 DAZAP2Q15038 168 aaPredicted RBP18.23■□□□□ 0.51
CLK3-225ENST00000569063 GUSBP1Q15486 140 aa18.23■□□□□ 0.51
CLK3-225ENST00000569063 GPR68Q15743 365 aa18.23■□□□□ 0.51
CLK3-225ENST00000569063 SLC9B1Q4ZJI4 515 aa18.23■□□□□ 0.51
CLK3-225ENST00000569063 ATAD3BQ5T9A4 648 aa18.23■□□□□ 0.51
CLK3-225ENST00000569063 ESPNLQ6ZVH7 1005 aa18.23■□□□□ 0.51
CLK3-225ENST00000569063 C16orf62Q7Z3J2 963 aa18.23■□□□□ 0.51
CLK3-225ENST00000569063 MAVSQ7Z434 540 aa18.23■□□□□ 0.51
CLK3-225ENST00000569063 GPR119Q8TDV5 335 aa18.23■□□□□ 0.51
CLK3-225ENST00000569063 OIT3Q8WWZ8 545 aa18.23■□□□□ 0.51
CLK3-225ENST00000569063 OR52E6Q96RD3 313 aa18.23■□□□□ 0.51
CLK3-225ENST00000569063 PANX1Q96RD7 426 aa18.23■□□□□ 0.51
CLK3-225ENST00000569063 ZBTB18Q99592 522 aa18.23■□□□□ 0.51
CLK3-225ENST00000569063 KCNE5Q9UJ90 142 aa18.23■□□□□ 0.51
CLK3-225ENST00000569063 MKLN1Q9UL63 735 aa18.23■□□□□ 0.51
CLK3-225ENST00000569063 OTOGQ6ZRI0 2925 aa18.22■□□□□ 0.51
CLK3-225ENST00000569063 MYO9AB2RTY4 2548 aa18.22■□□□□ 0.51
CLK3-225ENST00000569063 SERINC4A6NH21 518 aa18.22■□□□□ 0.51
CLK3-225ENST00000569063 CCDC154A6NI56 674 aa18.22■□□□□ 0.51
CLK3-225ENST00000569063 A6NNC1 897 aa18.22■□□□□ 0.51
CLK3-225ENST00000569063 ZNF264O43296 627 aa18.22■□□□□ 0.51
CLK3-225ENST00000569063 UGT2B17O75795 530 aa18.22■□□□□ 0.51
CLK3-225ENST00000569063 NUDT14O95848 222 aa18.22■□□□□ 0.51
CLK3-225ENST00000569063 OR12D1P0DN82 309 aa18.22■□□□□ 0.51
CLK3-225ENST00000569063 ME2P23368 584 aa18.22■□□□□ 0.51
CLK3-225ENST00000569063 ELK4P28324 431 aa18.22■□□□□ 0.51
CLK3-225ENST00000569063 CHI3L1P36222 383 aaPredicted RBP18.22■□□□□ 0.51
CLK3-225ENST00000569063 RNF144AP50876 292 aaPredicted RBP18.22■□□□□ 0.51
CLK3-225ENST00000569063 FGFBP1Q14512 234 aa18.22■□□□□ 0.51
CLK3-225ENST00000569063 PDCD4Q53EL6 469 aaKnown RBP18.22■□□□□ 0.51
CLK3-225ENST00000569063 PDZK1Q5T2W1 519 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms