RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 PHOSPHO1Q8TCT1 267 aa22.71■■□□□ 1.23
FANCA-228ENST00000567943 XAGE5Q8WWM1 108 aa22.71■■□□□ 1.23
FANCA-228ENST00000567943 RAB8BQ92930 207 aa22.71■■□□□ 1.23
FANCA-228ENST00000567943 PIGQQ9BRB3 760 aa22.71■■□□□ 1.23
FANCA-228ENST00000567943 SHISA8B8ZZ34 492 aa22.7■■□□□ 1.22
FANCA-228ENST00000567943 NPIPB9F8W1W9 429 aa22.7■■□□□ 1.22
FANCA-228ENST00000567943 TGM6O95932 706 aa22.7■■□□□ 1.22
FANCA-228ENST00000567943 PEPDP12955 493 aa22.7■■□□□ 1.22
FANCA-228ENST00000567943 POU3F2P20265 443 aaPredicted RBP22.7■■□□□ 1.22
FANCA-228ENST00000567943 CTSSP25774 331 aa22.7■■□□□ 1.22
FANCA-228ENST00000567943 KHKP50053 298 aa22.7■■□□□ 1.22
FANCA-228ENST00000567943 GPR68Q15743 365 aa22.7■■□□□ 1.22
FANCA-228ENST00000567943 ARHGAP11BQ3KRB8 267 aa22.7■■□□□ 1.22
FANCA-228ENST00000567943 GLYR1Q49A26 553 aaPredicted RBP22.7■■□□□ 1.22
FANCA-228ENST00000567943 DDX59Q5T1V6 619 aaKnown RBP eCLIP22.7■■□□□ 1.22
FANCA-228ENST00000567943 ATAD3BQ5T9A4 648 aa22.7■■□□□ 1.22
FANCA-228ENST00000567943 OLIG3Q7RTU3 272 aa22.7■■□□□ 1.22
FANCA-228ENST00000567943 UBQLNLQ8IYU4 475 aa22.7■■□□□ 1.22
FANCA-228ENST00000567943 B4GALNT2Q8NHY0 566 aa22.7■■□□□ 1.22
FANCA-228ENST00000567943 WNT2BQ93097 391 aa22.7■■□□□ 1.22
FANCA-228ENST00000567943 NPAS1Q99742 590 aa22.7■■□□□ 1.22
FANCA-228ENST00000567943 JKAMPQ9P055 326 aa22.7■■□□□ 1.22
FANCA-228ENST00000567943 KCNN3Q9UGI6 736 aa22.7■■□□□ 1.22
FANCA-228ENST00000567943 H3BML4 177 aa22.69■■□□□ 1.22
FANCA-228ENST00000567943 H3BNH8 94 aa22.69■■□□□ 1.22
FANCA-228ENST00000567943 RFXANKO14593 260 aa22.69■■□□□ 1.22
FANCA-228ENST00000567943 HCRTR2O43614 444 aa22.69■■□□□ 1.22
FANCA-228ENST00000567943 STX11O75558 287 aa22.69■■□□□ 1.22
FANCA-228ENST00000567943 RCBTB2O95199 551 aa22.69■■□□□ 1.22
FANCA-228ENST00000567943 AGR2O95994 175 aa22.69■■□□□ 1.22
FANCA-228ENST00000567943 ASCL1P50553 236 aa22.69■■□□□ 1.22
FANCA-228ENST00000567943 POLR2JP52435 117 aaKnown RBP22.69■■□□□ 1.22
FANCA-228ENST00000567943 STX1BP61266 288 aa22.69■■□□□ 1.22
FANCA-228ENST00000567943 TIGD2Q4W5G0 525 aa22.69■■□□□ 1.22
FANCA-228ENST00000567943 HEPHL1Q6MZM0 1159 aa22.69■■□□□ 1.22
FANCA-228ENST00000567943 DNAJC14Q6Y2X3 702 aaPredicted RBP22.69■■□□□ 1.22
FANCA-228ENST00000567943 MTERF4Q7Z6M4 381 aaKnown RBP22.69■■□□□ 1.22
FANCA-228ENST00000567943 RNF130Q86XS8 419 aa22.69■■□□□ 1.22
FANCA-228ENST00000567943 CCDC28BQ9BUN5 200 aa22.69■■□□□ 1.22
FANCA-228ENST00000567943 DTNAQ9Y4J8 743 aa22.69■■□□□ 1.22
FANCA-228ENST00000567943 LINC01387J3KSC0 135 aa22.68■■□□□ 1.22
FANCA-228ENST00000567943 OIP5O43482 229 aa22.68■■□□□ 1.22
FANCA-228ENST00000567943 FCMRO60667 390 aa22.68■■□□□ 1.22
FANCA-228ENST00000567943 IL18BPO95998 194 aa22.68■■□□□ 1.22
FANCA-228ENST00000567943 TMIGD3P0DMS9 266 aaPredicted RBP22.68■■□□□ 1.22
FANCA-228ENST00000567943 UQCRC1P31930 480 aa22.68■■□□□ 1.22
FANCA-228ENST00000567943 ZNF41P51814 821 aaPredicted RBP22.68■■□□□ 1.22
FANCA-228ENST00000567943 ZNF117Q03924 483 aa22.68■■□□□ 1.22
FANCA-228ENST00000567943 RNASE6Q93091 150 aaKnown RBP22.68■■□□□ 1.22
FANCA-228ENST00000567943 TM9SF2Q99805 663 aa22.68■■□□□ 1.22
FANCA-228ENST00000567943 NMUR2Q9GZQ4 415 aa22.68■■□□□ 1.22
FANCA-228ENST00000567943 ZNF350Q9GZX5 532 aa22.68■■□□□ 1.22
FANCA-228ENST00000567943 MED17Q9NVC6 651 aa22.68■■□□□ 1.22
FANCA-228ENST00000567943 MKLN1Q9UL63 735 aa22.68■■□□□ 1.22
FANCA-228ENST00000567943 A0A087WZY1 265 aa22.67■■□□□ 1.22
FANCA-228ENST00000567943 FAM234BA2RU67 622 aa22.67■■□□□ 1.22
FANCA-228ENST00000567943 GTPBP1O00178 669 aaKnown RBP22.67■■□□□ 1.22
FANCA-228ENST00000567943 TNFRSF21O75509 655 aa22.67■■□□□ 1.22
FANCA-228ENST00000567943 OPRM1P35372 400 aa22.67■■□□□ 1.22
FANCA-228ENST00000567943 CLDN20P56880 219 aa22.67■■□□□ 1.22
FANCA-228ENST00000567943 PDZK1Q5T2W1 519 aa22.67■■□□□ 1.22
FANCA-228ENST00000567943 CBLN3Q6UW01 205 aa22.67■■□□□ 1.22
FANCA-228ENST00000567943 MEIOBQ8N635 442 aa22.67■■□□□ 1.22
FANCA-228ENST00000567943 PNPT1Q8TCS8 783 aaKnown RBP22.67■■□□□ 1.22
FANCA-228ENST00000567943 SMPDL3BQ92485 455 aa22.67■■□□□ 1.22
FANCA-228ENST00000567943 VPS33AQ96AX1 596 aa22.67■■□□□ 1.22
FANCA-228ENST00000567943 ROPN1LQ96C74 230 aa22.67■■□□□ 1.22
FANCA-228ENST00000567943 INTS12Q96CB8 462 aaKnown RBP22.67■■□□□ 1.22
FANCA-228ENST00000567943 THOC1Q96FV9 657 aaKnown RBP22.67■■□□□ 1.22
FANCA-228ENST00000567943 RMND5AQ9H871 391 aa22.67■■□□□ 1.22
FANCA-228ENST00000567943 SLC6A13Q9NSD5 602 aa22.67■■□□□ 1.22
FANCA-228ENST00000567943 CARD8Q9Y2G2 431 aa22.67■■□□□ 1.22
FANCA-228ENST00000567943 SEC14L5O43304 696 aa22.66■■□□□ 1.22
FANCA-228ENST00000567943 FUT5Q11128 374 aa22.66■■□□□ 1.22
FANCA-228ENST00000567943 PLPPR5Q32ZL2 321 aa22.66■■□□□ 1.22
FANCA-228ENST00000567943 NDUFAF6Q330K2 333 aa22.66■■□□□ 1.22
FANCA-228ENST00000567943 MSANTD1Q6ZTZ1 278 aa22.66■■□□□ 1.22
FANCA-228ENST00000567943 CHMP1BQ7LBR1 199 aa22.66■■□□□ 1.22
FANCA-228ENST00000567943 GCNT2Q8N0V5 402 aa22.66■■□□□ 1.22
FANCA-228ENST00000567943 ITCHQ96J02 903 aa22.66■■□□□ 1.22
FANCA-228ENST00000567943 ZNF559Q9BR84 538 aa22.66■■□□□ 1.22
FANCA-228ENST00000567943 KCNE5Q9UJ90 142 aa22.66■■□□□ 1.22
FANCA-228ENST00000567943 WDR45Q9Y484 360 aa22.66■■□□□ 1.22
FANCA-228ENST00000567943 HEATR5AQ86XA9 2040 aa22.65■■□□□ 1.22
FANCA-228ENST00000567943 CENPVL1A0A0U1RR11 272 aa22.65■■□□□ 1.22
FANCA-228ENST00000567943 HMGN4O00479 90 aa22.65■■□□□ 1.22
FANCA-228ENST00000567943 ANP32DO95626 131 aa22.65■■□□□ 1.22
FANCA-228ENST00000567943 ZNF17P17021 662 aa22.65■■□□□ 1.22
FANCA-228ENST00000567943 PSMA4P25789 261 aaKnown RBP22.65■■□□□ 1.22
FANCA-228ENST00000567943 MRPL19P49406 292 aaKnown RBP22.65■■□□□ 1.22
FANCA-228ENST00000567943 MYBPHQ13203 477 aa22.65■■□□□ 1.22
FANCA-228ENST00000567943 ZNF141Q15928 474 aa22.65■■□□□ 1.22
FANCA-228ENST00000567943 GPAT3Q53EU6 434 aa22.65■■□□□ 1.22
FANCA-228ENST00000567943 GGNQ86UU5 652 aa22.65■■□□□ 1.22
FANCA-228ENST00000567943 GRAMD2AQ8IUY3 354 aa22.65■■□□□ 1.22
FANCA-228ENST00000567943 GTPBP8Q8N3Z3 284 aaPredicted RBP22.65■■□□□ 1.22
FANCA-228ENST00000567943 ZBTB8AQ96BR9 441 aa22.65■■□□□ 1.22
FANCA-228ENST00000567943 ZFP3Q96NJ6 502 aa22.65■■□□□ 1.22
FANCA-228ENST00000567943 CRIM1Q9NZV1 1036 aa22.65■■□□□ 1.22
FANCA-228ENST00000567943 AP4B1Q9Y6B7 739 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms