RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 RBP7Q96R05 134 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 RETREG1Q9H6L5 497 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 DIMT1Q9UNQ2 313 aaKnown RBP11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 WASH4PA8MWX3 477 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 NPC1O15118 1278 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 SRP9P49458 86 aaKnown RBP11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 CXADRP78310 365 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 IL13RA1P78552 427 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 GPR176Q14439 515 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 TOR2AQ5JU69 321 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 SFXN4Q6P4A7 337 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 TSSK4Q6SA08 328 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 PAQR9Q6ZVX9 377 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 SLC16A9Q7RTY1 509 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 TMEM179BQ7Z7N9 219 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 LRRC56Q8IYG6 542 aaPredicted RBP11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 ZNF680Q8NEM1 530 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 KATNBL1Q9H079 304 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 ACTL8Q9H568 366 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 RLIMQ9NVW2 624 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 HRH3Q9Y5N1 445 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 THSD7AQ9UPZ6 1657 aa11.67□□□□□ -0.54
CSPG4P13-202ENST00000567704 CLUP10909 449 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 GATMP50440 423 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 MFSD13AQ14CX5 517 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 C17orf107Q6ZR85 190 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 KLHDC8AQ8IYD2 350 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 STEAP2Q8NFT2 490 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 OR52I1Q8NGK6 324 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 HERVK_113Q902F9 699 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 SLC25A46Q96AG3 418 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 ERVMER34-1Q9H9K5 563 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 IL21RQ9HBE5 538 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 IER3IP1Q9Y5U9 82 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 MYO5AQ9Y4I1 1855 aaKnown RBP11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 NFKBIEO00221 500 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 RAF1P04049 648 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 RAB3AP20336 220 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 RIDAP52758 137 aaKnown RBP11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 ZNF805Q5CZA5 627 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 XKR7Q5GH72 579 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 CD276Q5ZPR3 534 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 LCN10Q6JVE6 187 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 MEPCEQ7L2J0 689 aaKnown RBP11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 GRAMD2AQ8IUY3 354 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 OR8J2Q8NGG1 315 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 OR13C3Q8NGS6 347 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 TMEM239Q8WW34 195 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 SEC22AQ96IW7 307 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 HIST1H2AAQ96QV6 131 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 SEC22CQ9BRL7 303 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 URM1Q9BTM9 101 aaKnown RBP11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 UNKLQ9H9P5 680 aaKnown RBP11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 LSM5Q9Y4Y9 91 aaKnown RBP11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 SLC33A1O00400 549 aaPredicted RBP11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 CDC123O75794 336 aaPredicted RBP11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 UBL3O95164 117 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 NDUFB2O95178 105 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 KNG1P01042 644 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 SBK3P0C264 359 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 AOAHP28039 575 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 EPHA2P29317 976 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 GNRHRP30968 328 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 ALDH3B1P43353 468 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 ERVK-21P61565 698 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 BAK1Q16611 211 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 ZMAT1Q5H9K5 638 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 SLC29A4Q7RTT9 530 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 RIMKLAQ8IXN7 391 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 SMAP2Q8WU79 429 aaPredicted RBP11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 LRRC46Q96FV0 321 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 ZNF304Q9HCX3 659 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 LEFTY2O00292 366 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 CASC3O15234 703 aaKnown RBP11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 BDKRB2P30411 391 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 MC3RP41968 323 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 ALG10Q5BKT4 473 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 CD163Q86VB7 1156 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 CCDC54Q8NEL0 328 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 PXT1Q8NFP0 134 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 OR2T4Q8NH00 348 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 ARL5BQ96KC2 179 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 MICU1Q9BPX6 476 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 ACTRT3Q9BYD9 372 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 MED20Q9H944 212 aa11.66□□□□□ -0.54
CSPG4P13-202ENST00000567704 RPS10-NUDT3A0A1W2PQS6 291 aa11.65□□□□□ -0.54
CSPG4P13-202ENST00000567704 TRIM64A6NGJ6 449 aa11.65□□□□□ -0.54
CSPG4P13-202ENST00000567704 TRIM64BA6NI03 449 aa11.65□□□□□ -0.54
CSPG4P13-202ENST00000567704 SMAD6O43541 496 aaKnown RBP11.65□□□□□ -0.54
CSPG4P13-202ENST00000567704 GPX2P18283 190 aa11.65□□□□□ -0.54
CSPG4P13-202ENST00000567704 RPS10P46783 165 aaKnown RBP11.65□□□□□ -0.54
CSPG4P13-202ENST00000567704 BTG1P62324 171 aa11.65□□□□□ -0.54
CSPG4P13-202ENST00000567704 ARHGAP40Q5TG30 622 aa11.65□□□□□ -0.54
CSPG4P13-202ENST00000567704 RAB11FIP2Q7L804 512 aa11.65□□□□□ -0.54
CSPG4P13-202ENST00000567704 SCGB1C1Q8TD33 95 aa11.65□□□□□ -0.54
CSPG4P13-202ENST00000567704 ELP5Q8TE02 316 aa11.65□□□□□ -0.54
CSPG4P13-202ENST00000567704 MYLIPQ8WY64 445 aa11.65□□□□□ -0.54
CSPG4P13-202ENST00000567704 CYP8B1Q9UNU6 501 aa11.65□□□□□ -0.54
CSPG4P13-202ENST00000567704 B3GALNT1O75752 331 aa11.65□□□□□ -0.54
CSPG4P13-202ENST00000567704 KCNK2O95069 426 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms