RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 TREX2Q9BQ50 279 aaPredicted RBP11.24□□□□□ -0.61
RNF40-211ENST00000567365 VKORC1Q9BQB6 163 aa11.24□□□□□ -0.61
RNF40-211ENST00000567365 QRSL1Q9H0R6 528 aaKnown RBP11.24□□□□□ -0.61
RNF40-211ENST00000567365 TP63Q9H3D4 680 aaPredicted RBP11.24□□□□□ -0.61
RNF40-211ENST00000567365 RAD21L1Q9H4I0 556 aa11.24□□□□□ -0.61
RNF40-211ENST00000567365 TMEM38AQ9H6F2 299 aa11.24□□□□□ -0.61
RNF40-211ENST00000567365 LDAHQ9H6V9 325 aa11.24□□□□□ -0.61
RNF40-211ENST00000567365 MTHFD2LQ9H903 347 aaPredicted RBP11.24□□□□□ -0.61
RNF40-211ENST00000567365 THUMPD1Q9NXG2 353 aaKnown RBP11.24□□□□□ -0.61
RNF40-211ENST00000567365 ARMCX1Q9P291 453 aa11.24□□□□□ -0.61
RNF40-211ENST00000567365 P2RX2Q9UBL9 471 aa11.24□□□□□ -0.61
RNF40-211ENST00000567365 L3MBTL1Q9Y468 752 aa11.24□□□□□ -0.61
RNF40-211ENST00000567365 CHST2Q9Y4C5 530 aa11.24□□□□□ -0.61
RNF40-211ENST00000567365 FAM215AQ9Y5M1 114 aa11.24□□□□□ -0.61
RNF40-211ENST00000567365 CAPN7Q9Y6W3 813 aa11.24□□□□□ -0.61
RNF40-211ENST00000567365 ARHGAP21Q5T5U3 1957 aa11.24□□□□□ -0.61
RNF40-211ENST00000567365 KIAA1549Q9HCM3 1950 aa11.23□□□□□ -0.61
RNF40-211ENST00000567365 A0A087WZY1 265 aa11.23□□□□□ -0.61
RNF40-211ENST00000567365 OR2M5A3KFT3 312 aa11.23□□□□□ -0.61
RNF40-211ENST00000567365 HCRTR2O43614 444 aa11.23□□□□□ -0.61
RNF40-211ENST00000567365 EIF4E2O60573 245 aaKnown RBP11.23□□□□□ -0.61
RNF40-211ENST00000567365 CCDC22O60826 627 aa11.23□□□□□ -0.61
RNF40-211ENST00000567365 SHOX2O60902 331 aaPredicted RBP11.23□□□□□ -0.61
RNF40-211ENST00000567365 ADAM11O75078 769 aa11.23□□□□□ -0.61
RNF40-211ENST00000567365 NPPAP01160 153 aa11.23□□□□□ -0.61
RNF40-211ENST00000567365 NR2F1P10589 423 aa11.23□□□□□ -0.61
RNF40-211ENST00000567365 HPGDP15428 266 aa11.23□□□□□ -0.61
RNF40-211ENST00000567365 CRATP43155 626 aa11.23□□□□□ -0.61
RNF40-211ENST00000567365 RNF144AP50876 292 aaPredicted RBP11.23□□□□□ -0.61
RNF40-211ENST00000567365 GZMMP51124 257 aa11.23□□□□□ -0.61
RNF40-211ENST00000567365 SUMO3P55854 103 aaPredicted RBP11.23□□□□□ -0.61
RNF40-211ENST00000567365 CLDN15P56746 228 aa11.23□□□□□ -0.61
RNF40-211ENST00000567365 CLDN18P56856 261 aa11.23□□□□□ -0.61
RNF40-211ENST00000567365 BCL2A1Q16548 175 aa11.23□□□□□ -0.61
RNF40-211ENST00000567365 TRMT5Q32P41 509 aaKnown RBP11.23□□□□□ -0.61
RNF40-211ENST00000567365 PLPPR5Q32ZL2 321 aa11.23□□□□□ -0.61
RNF40-211ENST00000567365 NDUFAF6Q330K2 333 aa11.23□□□□□ -0.61
RNF40-211ENST00000567365 GPAT3Q53EU6 434 aa11.23□□□□□ -0.61
RNF40-211ENST00000567365 SLC25A53Q5H9E4 307 aa11.23□□□□□ -0.61
RNF40-211ENST00000567365 PRAMEF8Q5VWM4 474 aa11.23□□□□□ -0.61
RNF40-211ENST00000567365 PRAMEF7Q5VXH5 474 aa11.23□□□□□ -0.61
RNF40-211ENST00000567365 REP15Q6BDI9 236 aa11.23□□□□□ -0.61
RNF40-211ENST00000567365 NET1Q7Z628 596 aaPredicted RBP11.23□□□□□ -0.61
RNF40-211ENST00000567365 ADGRE4PQ86SQ3 457 aa11.23□□□□□ -0.61
RNF40-211ENST00000567365 MTDHQ86UE4 582 aaKnown RBP11.23□□□□□ -0.61
RNF40-211ENST00000567365 SNX32Q86XE0 403 aa11.23□□□□□ -0.61
RNF40-211ENST00000567365 ULK2Q8IYT8 1036 aa11.23□□□□□ -0.61
RNF40-211ENST00000567365 GTPBP8Q8N3Z3 284 aaPredicted RBP11.23□□□□□ -0.61
RNF40-211ENST00000567365 RPRMLQ8N4K4 120 aa11.23□□□□□ -0.61
RNF40-211ENST00000567365 OR5M9Q8NGP3 310 aa11.23□□□□□ -0.61
RNF40-211ENST00000567365 B4GALNT2Q8NHY0 566 aa11.23□□□□□ -0.61
RNF40-211ENST00000567365 POC1BQ8TC44 478 aa11.23□□□□□ -0.61
RNF40-211ENST00000567365 SSC4DQ8WTU2 575 aa11.23□□□□□ -0.61
RNF40-211ENST00000567365 ABTB1Q969K4 478 aaPredicted RBP11.23□□□□□ -0.61
RNF40-211ENST00000567365 MAL2Q969L2 176 aa11.23□□□□□ -0.61
RNF40-211ENST00000567365 TMEM19Q96HH6 336 aa11.23□□□□□ -0.61
RNF40-211ENST00000567365 TRIM8Q9BZR9 551 aa11.23□□□□□ -0.61
RNF40-211ENST00000567365 LAT2Q9GZY6 243 aa11.23□□□□□ -0.61
RNF40-211ENST00000567365 KAT8Q9H7Z6 458 aaKnown RBP11.23□□□□□ -0.61
RNF40-211ENST00000567365 PTGES2Q9H7Z7 377 aa11.23□□□□□ -0.61
RNF40-211ENST00000567365 MED17Q9NVC6 651 aa11.23□□□□□ -0.61
RNF40-211ENST00000567365 CARD8Q9Y2G2 431 aa11.23□□□□□ -0.61
RNF40-211ENST00000567365 C15orf38-AP3S2A0A0A6YYH1 394 aa11.22□□□□□ -0.61
RNF40-211ENST00000567365 A0A0G2JPF8 293 aa11.22□□□□□ -0.61
RNF40-211ENST00000567365 CLDN24A6NM45 220 aa11.22□□□□□ -0.61
RNF40-211ENST00000567365 BBIP1A8MTZ0 92 aa11.22□□□□□ -0.61
RNF40-211ENST00000567365 KDM4EB2RXH2 506 aaPredicted RBP11.22□□□□□ -0.61
RNF40-211ENST00000567365 HNRNPCL2B2RXH8 293 aa11.22□□□□□ -0.61
RNF40-211ENST00000567365 HNRNPCL3B7ZW38 293 aa11.22□□□□□ -0.61
RNF40-211ENST00000567365 H3BNH8 94 aa11.22□□□□□ -0.61
RNF40-211ENST00000567365 CCL21O00585 134 aa11.22□□□□□ -0.61
RNF40-211ENST00000567365 ZNF264O43296 627 aa11.22□□□□□ -0.61
RNF40-211ENST00000567365 HNRNPCL1O60812 293 aaKnown RBP11.22□□□□□ -0.61
RNF40-211ENST00000567365 WDR1O75083 606 aa11.22□□□□□ -0.61
RNF40-211ENST00000567365 AGFG2O95081 481 aa11.22□□□□□ -0.61
RNF40-211ENST00000567365 BCHEP06276 602 aa11.22□□□□□ -0.61
RNF40-211ENST00000567365 HNRNPCL4P0DMR1 293 aa11.22□□□□□ -0.61
RNF40-211ENST00000567365 UBL4AP11441 157 aa11.22□□□□□ -0.61
RNF40-211ENST00000567365 ZNF708P17019 499 aa11.22□□□□□ -0.61
RNF40-211ENST00000567365 ZNF17P17021 662 aa11.22□□□□□ -0.61
RNF40-211ENST00000567365 HK1P19367 917 aa11.22□□□□□ -0.61
RNF40-211ENST00000567365 ACVR2AP27037 513 aa11.22□□□□□ -0.61
RNF40-211ENST00000567365 P2RX1P51575 399 aa11.22□□□□□ -0.61
RNF40-211ENST00000567365 NFYCQ13952 458 aa11.22□□□□□ -0.61
RNF40-211ENST00000567365 TOMM20Q15388 145 aa11.22□□□□□ -0.61
RNF40-211ENST00000567365 MAPRE2Q15555 327 aa11.22□□□□□ -0.61
RNF40-211ENST00000567365 WLSQ5T9L3 541 aa11.22□□□□□ -0.61
RNF40-211ENST00000567365 NANOGP8Q6NSW7 305 aa11.22□□□□□ -0.61
RNF40-211ENST00000567365 C3P1Q6ZMU1 363 aa11.22□□□□□ -0.61
RNF40-211ENST00000567365 SEM1Q6ZVN7 128 aa11.22□□□□□ -0.61
RNF40-211ENST00000567365 NCCRP1Q6ZVX7 275 aaPredicted RBP11.22□□□□□ -0.61
RNF40-211ENST00000567365 HMGN2P46Q86SG4 172 aa11.22□□□□□ -0.61
RNF40-211ENST00000567365 PTOV1Q86YD1 416 aa11.22□□□□□ -0.61
RNF40-211ENST00000567365 CMIPQ8IY22 773 aa11.22□□□□□ -0.61
RNF40-211ENST00000567365 METTL25Q8N6Q8 603 aa11.22□□□□□ -0.61
RNF40-211ENST00000567365 OR14L1PQ8NHC6 308 aa11.22□□□□□ -0.61
RNF40-211ENST00000567365 GPR119Q8TDV5 335 aa11.22□□□□□ -0.61
RNF40-211ENST00000567365 ITLN2Q8WWU7 325 aaPredicted RBP11.22□□□□□ -0.61
RNF40-211ENST00000567365 LRRC58Q96CX6 371 aa11.22□□□□□ -0.61
RNF40-211ENST00000567365 DTNBP1Q96EV8 351 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms