RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 USB1Q9BQ65 265 aaKnown RBP24.77■■□□□ 1.56
UBFD1-206ENST00000566669 TACO1Q9BSH4 297 aaKnown RBP24.77■■□□□ 1.56
UBFD1-206ENST00000566669 ACTRT3Q9BYD9 372 aa24.77■■□□□ 1.56
UBFD1-206ENST00000566669 FAF1Q9UNN5 650 aaPredicted RBP24.77■■□□□ 1.56
UBFD1-206ENST00000566669 SNX8Q9Y5X2 465 aa24.77■■□□□ 1.56
UBFD1-206ENST00000566669 PIP5K1BO14986 540 aa24.76■■□□□ 1.55
UBFD1-206ENST00000566669 CXCL13O43927 109 aa24.76■■□□□ 1.55
UBFD1-206ENST00000566669 HEXAP06865 529 aa24.76■■□□□ 1.55
UBFD1-206ENST00000566669 PSMB1P20618 241 aaKnown RBP24.76■■□□□ 1.55
UBFD1-206ENST00000566669 STAC2Q6ZMT1 411 aa24.76■■□□□ 1.55
UBFD1-206ENST00000566669 GALNT10Q86SR1 603 aa24.76■■□□□ 1.55
UBFD1-206ENST00000566669 LILRA2Q8N149 483 aa24.76■■□□□ 1.55
UBFD1-206ENST00000566669 GATSQ8NAP1 163 aa24.76■■□□□ 1.55
UBFD1-206ENST00000566669 FBXO30Q8TB52 745 aa24.76■■□□□ 1.55
UBFD1-206ENST00000566669 CHMP6Q96FZ7 201 aa24.76■■□□□ 1.55
UBFD1-206ENST00000566669 C16orf58Q96GQ5 468 aa24.76■■□□□ 1.55
UBFD1-206ENST00000566669 GSX2Q9BZM3 304 aa24.76■■□□□ 1.55
UBFD1-206ENST00000566669 SIRT3Q9NTG7 399 aaPredicted RBP24.76■■□□□ 1.55
UBFD1-206ENST00000566669 GPC6Q9Y625 555 aaPredicted RBP24.76■■□□□ 1.55
UBFD1-206ENST00000566669 TNFSF11O14788 317 aa24.75■■□□□ 1.55
UBFD1-206ENST00000566669 LINGO3P0C6S8 592 aa24.75■■□□□ 1.55
UBFD1-206ENST00000566669 PRPS1L1P21108 318 aa24.75■■□□□ 1.55
UBFD1-206ENST00000566669 ALDH3A1P30838 453 aa24.75■■□□□ 1.55
UBFD1-206ENST00000566669 CCT3P49368 545 aaKnown RBP24.75■■□□□ 1.55
UBFD1-206ENST00000566669 LASP1Q14847 261 aaKnown RBP24.75■■□□□ 1.55
UBFD1-206ENST00000566669 XKR7Q5GH72 579 aa24.75■■□□□ 1.55
UBFD1-206ENST00000566669 STEAP2Q8NFT2 490 aa24.75■■□□□ 1.55
UBFD1-206ENST00000566669 SFXN5Q8TD22 340 aa24.75■■□□□ 1.55
UBFD1-206ENST00000566669 ADAMTS15Q8TE58 950 aa24.75■■□□□ 1.55
UBFD1-206ENST00000566669 OSTF1Q92882 214 aa24.75■■□□□ 1.55
UBFD1-206ENST00000566669 ARL8AQ96BM9 186 aa24.75■■□□□ 1.55
UBFD1-206ENST00000566669 SH3YL1Q96HL8 342 aaPredicted RBP24.75■■□□□ 1.55
UBFD1-206ENST00000566669 COX4I2Q96KJ9 171 aa24.75■■□□□ 1.55
UBFD1-206ENST00000566669 ARID1AO14497 2285 aa24.75■■□□□ 1.55
UBFD1-206ENST00000566669 P2RX1P51575 399 aa24.74■■□□□ 1.55
UBFD1-206ENST00000566669 MAD2L1Q13257 205 aaPredicted RBP24.74■■□□□ 1.55
UBFD1-206ENST00000566669 TP53BP2Q13625 1128 aa24.74■■□□□ 1.55
UBFD1-206ENST00000566669 ZAR1Q86SH2 424 aa24.74■■□□□ 1.55
UBFD1-206ENST00000566669 PHOSPHO1Q8TCT1 267 aa24.74■■□□□ 1.55
UBFD1-206ENST00000566669 TRIM44Q96DX7 344 aaPredicted RBP24.74■■□□□ 1.55
UBFD1-206ENST00000566669 A0A0J9YW62 118 aa24.73■■□□□ 1.55
UBFD1-206ENST00000566669 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP24.73■■□□□ 1.55
UBFD1-206ENST00000566669 TLDC2A0PJX2 215 aa24.73■■□□□ 1.55
UBFD1-206ENST00000566669 CHRNGP07510 517 aa24.73■■□□□ 1.55
UBFD1-206ENST00000566669 NUDT17P0C025 328 aa24.73■■□□□ 1.55
UBFD1-206ENST00000566669 PAX1P15863 534 aa24.73■■□□□ 1.55
UBFD1-206ENST00000566669 LOXP28300 417 aaPredicted RBP24.73■■□□□ 1.55
UBFD1-206ENST00000566669 AGTR1P30556 359 aa24.73■■□□□ 1.55
UBFD1-206ENST00000566669 SPDYE7PQ495Y7 208 aa24.73■■□□□ 1.55
UBFD1-206ENST00000566669 KLHL26Q53HC5 615 aa24.73■■□□□ 1.55
UBFD1-206ENST00000566669 TMEM201Q5SNT2 666 aa24.73■■□□□ 1.55
UBFD1-206ENST00000566669 CCNJQ5T5M9 372 aa24.73■■□□□ 1.55
UBFD1-206ENST00000566669 YTHDF3Q7Z739 585 aaKnown RBP24.73■■□□□ 1.55
UBFD1-206ENST00000566669 SLC43A2Q8N370 569 aa24.73■■□□□ 1.55
UBFD1-206ENST00000566669 RNF128Q8TEB7 428 aa24.73■■□□□ 1.55
UBFD1-206ENST00000566669 CDS1Q92903 461 aa24.73■■□□□ 1.55
UBFD1-206ENST00000566669 COQ8BQ96D53 544 aa24.73■■□□□ 1.55
UBFD1-206ENST00000566669 HS3ST6Q96QI5 342 aa24.73■■□□□ 1.55
UBFD1-206ENST00000566669 ROPN1BQ9BZX4 212 aaPredicted RBP24.73■■□□□ 1.55
UBFD1-206ENST00000566669 CXorf56Q9H5V9 222 aa24.73■■□□□ 1.55
UBFD1-206ENST00000566669 ROPN1Q9HAT0 212 aaPredicted RBP24.73■■□□□ 1.55
UBFD1-206ENST00000566669 NGBQ9NPG2 151 aa24.73■■□□□ 1.55
UBFD1-206ENST00000566669 CLEC4AQ9UMR7 237 aa24.73■■□□□ 1.55
UBFD1-206ENST00000566669 PCNX3Q9H6A9 2034 aa24.73■■□□□ 1.55
UBFD1-206ENST00000566669 KLF4O43474 513 aa24.72■■□□□ 1.55
UBFD1-206ENST00000566669 PEX11AO75192 247 aa24.72■■□□□ 1.55
UBFD1-206ENST00000566669 NUDT14O95848 222 aa24.72■■□□□ 1.55
UBFD1-206ENST00000566669 ATP12AP54707 1039 aa24.72■■□□□ 1.55
UBFD1-206ENST00000566669 CD226Q15762 336 aa24.72■■□□□ 1.55
UBFD1-206ENST00000566669 ZNF239Q16600 458 aaKnown RBP24.72■■□□□ 1.55
UBFD1-206ENST00000566669 DCST2Q5T1A1 773 aa24.72■■□□□ 1.55
UBFD1-206ENST00000566669 ANKRD34AQ69YU3 496 aa24.72■■□□□ 1.55
UBFD1-206ENST00000566669 OR7A2PQ8NGA2 310 aa24.72■■□□□ 1.55
UBFD1-206ENST00000566669 POC1BQ8TC44 478 aa24.72■■□□□ 1.55
UBFD1-206ENST00000566669 TMEM171Q8WVE6 324 aa24.72■■□□□ 1.55
UBFD1-206ENST00000566669 MRGPRX4Q96LA9 322 aa24.72■■□□□ 1.55
UBFD1-206ENST00000566669 ZIM3Q96PE6 472 aa24.72■■□□□ 1.55
UBFD1-206ENST00000566669 BHLHE41Q9C0J9 482 aaPredicted RBP24.72■■□□□ 1.55
UBFD1-206ENST00000566669 ACTR6Q9GZN1 396 aa24.72■■□□□ 1.55
UBFD1-206ENST00000566669 FBXO34Q9NWN3 711 aa24.72■■□□□ 1.55
UBFD1-206ENST00000566669 LGALS13Q9UHV8 139 aa24.72■■□□□ 1.55
UBFD1-206ENST00000566669 DUXAA6NLW8 204 aa24.71■■□□□ 1.55
UBFD1-206ENST00000566669 GTPBP1O00178 669 aaKnown RBP24.71■■□□□ 1.55
UBFD1-206ENST00000566669 AK1P00568 194 aa24.71■■□□□ 1.55
UBFD1-206ENST00000566669 THBDP07204 575 aa24.71■■□□□ 1.55
UBFD1-206ENST00000566669 LAMP1P11279 417 aa24.71■■□□□ 1.55
UBFD1-206ENST00000566669 ZNF117Q03924 483 aa24.71■■□□□ 1.55
UBFD1-206ENST00000566669 C6orf136Q5SQH8 315 aa24.71■■□□□ 1.55
UBFD1-206ENST00000566669 ZNF704Q6ZNC4 412 aaPredicted RBP24.71■■□□□ 1.55
UBFD1-206ENST00000566669 FNDC5Q8NAU1 212 aa24.71■■□□□ 1.55
UBFD1-206ENST00000566669 Q96MF0 132 aa24.71■■□□□ 1.55
UBFD1-206ENST00000566669 TMEM185BQ9H7F4 350 aa24.71■■□□□ 1.55
UBFD1-206ENST00000566669 ICAM5Q9UMF0 924 aa24.71■■□□□ 1.55
UBFD1-206ENST00000566669 TMEM233B4DJY2 109 aa24.7■■□□□ 1.54
UBFD1-206ENST00000566669 EIF4E2O60573 245 aaKnown RBP24.7■■□□□ 1.54
UBFD1-206ENST00000566669 C21orf58P58505 322 aa24.7■■□□□ 1.54
UBFD1-206ENST00000566669 IFFO1Q0D2I5 559 aa24.7■■□□□ 1.54
UBFD1-206ENST00000566669 SMU1Q2TAY7 513 aa24.7■■□□□ 1.54
UBFD1-206ENST00000566669 SSX8Q7RTT4 187 aa24.7■■□□□ 1.54
UBFD1-206ENST00000566669 ZNF611Q8N823 705 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms